Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25654 LG6 25375049 25377183 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 25375172 missense_variant p.Lys140Asn
C/A 25375253 synonymous_variant p.Pro113Pro
C/T 25375279 missense_variant p.Ala105Thr
T/A 25375325 synonymous_variant p.Pro89Pro
A/G 25375328 synonymous_variant p.Asp88Asp
C/T 25375364 synonymous_variant p.Leu76Leu
C/T 25375525 missense_variant p.Glu23Lys
G/T 25375567 upstream_gene_variant
A/G 25375592 upstream_gene_variant
C/T 25375645 upstream_gene_variant
T/C 25375648 upstream_gene_variant
G/T 25375718 upstream_gene_variant
T/C 25375732 upstream_gene_variant
C/A 25375771 upstream_gene_variant
A/G 25376070 upstream_gene_variant
T/A 25376102 upstream_gene_variant
G/A 25376186 upstream_gene_variant
T/C 25376227 upstream_gene_variant
T/C 25376367 upstream_gene_variant
C/T 25376395 upstream_gene_variant
T/A 25376405 upstream_gene_variant
A/G 25376461 upstream_gene_variant
G/T 25376487 upstream_gene_variant
C/A 25376561 upstream_gene_variant
G/A 25376570 upstream_gene_variant
G/A 25376572 upstream_gene_variant
C/A 25376577 upstream_gene_variant
A/T 25376589 upstream_gene_variant
A/T 25376590 upstream_gene_variant
A/G 25376593 upstream_gene_variant
C/T 25376594 upstream_gene_variant
A/T 25376598 upstream_gene_variant
T/C 25376712 upstream_gene_variant
C/T 25376726 upstream_gene_variant
A/G 25376814 upstream_gene_variant
A/G 25376856 upstream_gene_variant
T/C 25376873 upstream_gene_variant
G/A 25376874 upstream_gene_variant
G/A 25376902 upstream_gene_variant
G/A 25376974 upstream_gene_variant
A/G 25377050 upstream_gene_variant
A/T 25377081 upstream_gene_variant
A/C 25377117 upstream_gene_variant
C/A 25377150 missense_variant p.Gly12Trp
A/T 25377160 synonymous_variant p.Ala8Ala
G/A 25377165 synonymous_variant p.Leu7Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25654.1
MRSTSNLATWSGPGIHSQKSATEFVQAALHEIDILSSIADYAKYGVVLLELITGRKPVDMSQPQGEDNLVTWARPLLRYREGLEKVVDPFLAGKYEFNEMAKIAAIASLCVHPEVTQRPFMGEVVRALKLIYNDTNESEKESLCHELDFEGDLVFSDSSWLDGEGVTPRLTYGPESSLIT*


CDS Sequence:
>Vu_25654.1
ATGCGTTCAACGTCAAACCTGGCTACCTGGTCCGGGCCTGGCATTCATAGCCAGAAAAGTGCCACCGAGTTTGTTCAGGCTGCCCTTCATGAGATTGATATTCTTTCATCCATTGCTGACTATGCAAAATATGGTGTTGTGCTGCTTGAGCTTATAACAGGCAGAAAACCAGTGGACATGTCTCAACCTCAAGGAGAGGATAATCTTGTAACGTGGGCTCGACCACTGTTGAGATATAGGGAAGGTTTAGAAAAGGTGGTGGATCCATTTTTGGCTGGAAAGTATGAGTTCAATGAGATGGCAAAGATAGCGGCTATTGCTTCCTTGTGTGTCCACCCGGAGGTCACTCAAAGGCCTTTTATGGGTGAAGTTGTGCGGGCTCTTAAGTTGATCTACAACGACACCAATGAGAGTGAGAAGGAGTCTTTGTGCCATGAATTAGATTTTGAAGGTGACCTTGTGTTTTCTGATAGCAGTTGGTTGGATGGTGAAGGGGTAACCCCGAGATTAACTTATGGACCTGAATCTTCCCTCATCACTTAA


Promoter Sequence:
>Vu_25654::LG6:25377183-25379183(-)
ACTCCTATTGTTTGGTGATATAATGTTCAAAGCGGCTCAAAAATAGCTTGGCAAAATGTGTCACAAACGACCATCCAAGACTTGGTCGAACAACAAATCAGGCTAACCATGAAGAACCAAATTATAAGCATCGTACTTAGACATGGGAAGCTCAAACACTATATCAATAAAAAAAGCATCACTATCCATCCACCAAATCCCCTCAACCTTGGGATGTGACAACATCAACCTCCGAATCATAGGCAACTTTGCCCAGTAGCCAGCATGTTCCACATCCAAATGAGTCAAATTGTACACAATTTCAATCATGTGTAATCTACAGTAATCAATCATGTTCTTAATGGACTTCAAGAGGTAATGATCTCCAATAGGGTTATCACAGGGTTTGGGAGGGGAAGCAGTGAGGAGTAAGATGCGAGGTTTACCTCTGATGAAATTAGGGTATTAAGGGTTTTGAGTGAGCCAATTTTGGCGCTCTTGGTACCAATTATTGATTTTGGGACCGATGGTGAAGGTAGCGTTGGGGTTGCTGGTCGTCGGGATCGGAGGGGTCGACGTAGGATCGCATCTCGGCGAGGATGCGGTTGGTCTCCTCGATAAGGTTATGGTTGACAGCATCGAAATCGGAGGAGCCGAGATTGACGTCGATTGTGCCGCGGAGGACGAGGATGGTGACAAAGCCACATAGTATAATGATCTTAATGTTGTTGAAGGTCTTCTAGATCTGGTGGGTGGCACGACCTCGAGCATTGGAGGTGGGTAAACGACCACTGATGTTGCGCTTGTTGTGATTGTCTTGCCCCTCATTCACCCTCACAATGCCATGTAATCACAAAAACTGGACACCTCATTATATTTTGTCCATGGGGCACATGCACCGTTAAAATTTTGACGCCATAACCAAAAAGGATTAATTTGACTTGATTTTTCACAAGTTGGAACCGTTTCAAACTTTTTAGGAAAGGTAGGATCACTTTGAACAATCCCCCACTTTCGAGGGACCAAAAAAGGTATTAAGTCATTTATAAATATATGTTTAACAAGAGGGGTCAAGTAAATACTGTTGACTACTCATCTTTACCATATAATTATTGGGTATAATCACTGACTTGAACGTCGGAATGTCTTTTACAAGTATCCAGCCACACAACTAGGACAACAAGAAGAGAGAGTGACAACGTAACTCGAATAATGAAGGATTATTAAGGAGTCCATATGATCTTTAAGATAGTTTGAAGTGCTTTGAGTAAGGGATCTCAACCCCTAACCGAAACATTTTGGCGCTCATTATGGGGCCGAGCGACATCCTCTCTAGCCACAAGGAACCAGACAAGCGGTACAATGGAAAACAATCATCTAGTCATCTGGTCCGAGATTTCTCGTTGTGTAATGTGCTCAACCTTGACTTGATGGTCTTGCACAACTTCATATATGACAACTTGTTGTGTGACCGACCATGGACGTTCAGCCTGATCACATCATAATATGGCTACAATTTTAATCACTTAGTTTGATATGACATTTTATCGTTTCTACCCAATTAATTGTCGATGACGAGACCGAATGGTCCTACTTCAAATAACACGACTTGTTCCAAGGTTGGTCCTCTTGGCATTATTCATAGCCTTAACTAAGTGGACATGTCTCACTTCACCTCCCTGACATTGTTAAGGCCTCTTAAATGACCATCTTTGGCCTCAAACTATTACCTCTTCATCAGCGTTGACAGTTTGACTTGGTGCCTCTATTCATATCAAGGTTATCTCAGGCCTTAATCTCTTCTCTCATTCGACACCACCGGTCTCAAGCTTATAGTTGTTCAGTTCCAACTAGACAGCCGATCAACGGTTTCTACCTCACATATTGGCCTTATTCAAGCGTCAACTGTTCACCTTTGGCATCAAACTTCCCTCGAAGTCTCCATCGGTATCTGCCTCATTTAACTCCTCCACAGTCTTGTTCGACATACTAGTCTAATTGTCTTCAAATTGATCGGCCTC


Gene Sequence:
>Vu_25654(-)
ATGCGTTCAACGTCAAACCTGGCTACCTGGTCCGGGCCTGGCATTCATAGCCAGGTGTTCTTTCCATATAGAAGACCTTGCCTAATCTCTACCTAAGTAGGCTTAATATCAGTGGTTCAATCACCTTTGACCTTAAGTCTTGGTTGTTTGGGCATCAACCATCAGCCTTGGCCTGGCTCCAAAGTTAACTGTTTGGCCAAGGTTTCGGCCATTCATTATGGACCATTTTTCTTTTTTGTAGGATATAGTCTGAGTATACTTGAGTCTCTCTCTCGCTCGGTCAGTTGACCCTCATATGTTTATCCTCGTCAGGCCCCAATGGCTTAGTTCTTGTTCGAGCCTCAACTAGGCACCTCAACCCTTGTTTAATGTATCCTGAGCGGTGCCAATCCATATAGTCATGGTCAACGCCCTCAACTCTTCTACAAGTCACAAGGCATTAAGCACTAACATCTCCGCCGCATATTCCTCATTTTGGCCTTCAATCGTTCAACCGAAGACTGAACGATCTTGCTTGCTTGACCATCCGATCTTATAGCCTAAACTAGCTTGATTTTAAATGTCTAACCTCGTCAATCCGACAAATAATGTTTTTAAACTTCAGTTGAGTCCTCCACGGGTAGTCAGGGAACATTTTGAACTCCTGACTTACCTTTAACCAACCCACAAGGAATGTTTCTCAACTTCTGGTGAGCCCTTCACGAGTGGTCAGGGAACATTTTTCAACCTCCTAACTTACCTTCAACTAGCCATAGAGAATGTTTTTCAACTCATGTCAAACCCTCTACGAGCGGTCAAAGAACGTTTTTCAAACTCATGACTTACCTTCAACCAACCTGTAGGGAACATTTTTTAACTTCGACCTTACTTACAACGAGTAGTCAATGAAACTCAAGATATTGGTCAATGTACAACAACACACAAAGATATGTGACAATGACAAAATTTTGCAAAATATTTTAAAAATAAAATAGAAATTTAAAAGACTAAAAAAAATCACATATTGACATGTGATATGCTATTAATGTCATTAGTAATTTTTTTAAACATAATTGAAACATTTTTCCAAATATTAGGACATAATTATTATTATTTTTTAAATGATAATCAACTTGAAACTTTTCCATGAAAATGGACACCAAACGAGTAATTAAACTTATGTATTATTTCTACTCCAAAAAAGTTATCTTAAAAAGAGTAGTTAAGATATTTAAAGATCTTTTAGTAGTTACCCTTCATCCCTGATGACAATATTAATGTCATTACTCATAAAATTTAGAAGTCTTAAGATTGTAATTATATCTACTAATAGAGATAATGGACTTTGTGTTTCATAAAGAATTGATTTTTATATAATTTTTTTCTTCTAAGTATTTGTCCATGAGTTTTCACCTTGAGTCTTTGATACATTTGTCTGAGATGAAATGTTTATATTTTCATTAGGCTTAAATACTTACTTCGTCCCCATGTTAAGAGGTGAATTTTTGTTTAGTATCCAATTTTAAAAATGAAGACATTTGGTCCTTATGTTATGAAAAGTGTATGAATAAGGTCTTGTCCTTAAGTTGACAGCAACGACATTAAGTCCATGTTGATGTGGGCGTACTTTTTCTCTTCTTTCCTCTACTATTGCTCTCAAGATCTAGAAAAGTGCCACCGAGTTTGTTCAGGCTGCCCTTCATGAGATTGATATTCTTTCATCCATTGCTGACTATGCAAAATATGGTGTTGTGCTGCTTGAGCTTATAACAGGCAGAAAACCAGTGGACATGTCTCAACCTCAAGGAGAGGATAATCTTGTAACGTGGGCTCGACCACTGTTGAGATATAGGGAAGGTTTAGAAAAGGTGGTGGATCCATTTTTGGCTGGAAAGTATGAGTTCAATGAGATGGCAAAGATAGCGGCTATTGCTTCCTTGTGTGTCCACCCGGAGGTCACTCAAAGGCCTTTTATGGGTGAAGTTGTGCGGGCTCTTAAGTTGATCTACAACGACACCAATGAGAGTGAGAAGGAGTCTTTGTGCCATGAATTAGATTTTGAAGGTGACCTTGTGTTTTCTGATAGCAGTTGGTTGGATGGTGAAGGGGTAACCCCGAGATTAACTTATGGACCTGAATCTTCCCTCATCACTTAA