Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25640 LG6 25217440 25218078 PREDICTED: ethylene-responsive transcription factor 9-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/A 25217447 missense_variant p.Ala3Asp
C/T 25217700 synonymous_variant p.Ala87Ala
C/A 25217706 synonymous_variant p.Thr89Thr
A/C 25217708 missense_variant p.Asn90Thr
G/A 25217765 missense_variant p.Ser109Asn
C/T 25217766 synonymous_variant p.Ser109Ser
C/T 25217769 synonymous_variant p.Ser110Ser
C/T 25217777 missense_variant p.Pro113Leu
C/T 25217787 synonymous_variant p.Ser116Ser
C/T 25217790 synonymous_variant p.Ser117Ser
C/T 25217802 synonymous_variant p.Ser121Ser
G/C 25217811 synonymous_variant p.Pro124Pro
C/T 25217815 missense_variant p.Arg126Cys
C/T 25217825 missense_variant p.Thr129Met
C/T 25217854 missense_variant p.Arg139Cys
C/T 25217865 synonymous_variant p.Phe142Phe
G/A 25217871 synonymous_variant p.Pro144Pro
C/T 25217884 synonymous_variant p.Leu149Leu
G/T 25217886 synonymous_variant p.Leu149Leu
G/A 25217890 missense_variant p.Val151Met
C/T 25217897 missense_variant p.Pro153Leu
T/C 25217901 synonymous_variant p.Val154Val
G/A 25217908 missense_variant p.Val157Met
G/A 25217917 missense_variant p.Val160Ile
C/T 25217925 synonymous_variant p.Leu162Leu
T/G 25217927 missense_variant p.Leu163Arg
G/A 25217933 missense_variant p.Arg165His
C/G 25217934 synonymous_variant p.Arg165Arg
T/C 25217952 synonymous_variant p.His171His
G/A 25217967 synonymous_variant p.Arg176Arg
G/A 25217971 missense_variant p.Glu178Lys
G/A 25217976 synonymous_variant p.Pro179Pro
G/A 25217982 synonymous_variant p.Pro181Pro
G/A 25217983 missense_variant p.Val182Ile
C/T 25217997 synonymous_variant p.Ser186Ser
C/T 25218015 synonymous_variant p.Val192Val
G/A 25218057 synonymous_variant p.Leu206Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25640.1
MVAKDKTVIKNKKPNNAADEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARNFRGPKAKTNFPLLPDTAAAVTNNNNVNRNNNNNNVTNNASSSSSPSQSSTVESATPERDVTRLAATAVIDRFPFLPIQQQLLVAPVAPVRPVFLLDRAHYLTHQFPFRFEPAPVQSDSDSSSVVDCQPKRELNLDLNLAPPMDY*


CDS Sequence:
>Vu_25640.1
ATGGTCGCCAAGGACAAAACGGTCATAAAGAATAAGAAGCCAAACAATGCTGCCGACGAGGTTCACTACCGCGGCGTCCGAAAGCGCCCCTGGGGCCGCTACGCCGCCGAGATCCGCGACCCCGGCAAGAAATCTCGCGTCTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCAGAGCCTACGACGCCGCCGCCCGCAACTTCCGCGGCCCCAAAGCTAAAACCAACTTTCCCCTTCTCCCCGACACCGCCGCCGCCGTCACCAACAACAACAACGTTAACCGGAACAACAACAACAACAACGTAACAAACAACGCTAGCAGCAGCAGCAGCCCTAGCCAGAGCAGCACCGTCGAGTCCGCCACCCCGGAGCGTGACGTCACGCGCCTCGCCGCCACTGCCGTCATCGACCGCTTCCCCTTCCTCCCGATCCAGCAGCAGCTGCTCGTGGCCCCGGTTGCTCCCGTGCGCCCGGTTTTTCTCCTGGACCGCGCCCATTACCTCACCCATCAATTCCCCTTCCGGTTCGAACCGGCCCCGGTTCAGAGCGACTCCGATTCCTCCTCCGTTGTCGATTGCCAACCCAAAAGAGAACTCAATCTCGATCTCAACCTGGCTCCTCCTATGGATTATTAA


Promoter Sequence:
>Vu_25640::LG6:25215440-25217440(+)
GTTGGCTCACTAACCCACTTATAAATTTTAAATTATATTAAAACAATGAAAATCCTATACCTAAACCCTCTTATATTGTGGATTTATCCATTTAAGACTCTAATATTTTATATGGATAAGTGACAACAATGAATTGATATTAGATAGTAATTTGTTTTTGCATTTTTTATTGTATTTGTAGTTTATCATGATTTTGAATTGTATTGTATTTTTTCTTTTTGGATTGTGTTTGGAGTTTGCTTTAAATTTGGATTGAACTTTATTTAGATTTCAATTAAAAAAAATTACTTTTTTTTAAGATTGAAAAAATAATTATAATTAAATAAACTAATGAGTCAACCGGTTTAATCCACTAATTTATGGTGGACCAAGTTAGATTCTAATTTTTTAAGATCACTAATAAATAAACAAAGTTGGATTGACCTACTAATTGACTAATTTATGGTGAATCGAGTCGCATTCGATAACTAGTTTTGATAATACCTAACATTTGGATAATAGAATAATAAATTTCTACTTTTAAAATGATGAAATATTAATAATTTTTTGAAATTTATTAAAAAAGAAAAGCATAAAAAATAGCAAACTAAAACATAAAGAATGAATTAAAACAACATATCAAAGTATTTATAAACTAATTAAAAAAACCTATTTATAGGATAAAATAAAGTTAAACGAAGTTTTTAACTAATTTCTAAACTAAAAATTCTCATAAAAGATTCACTCAACAAACAAGAAAATTTTACCACTCATATGATAAGATTTGTGAAATAATACCGGTTATTTTACATAAATATAATGGATTTTAAATACGTTCCACGTAAATGAACATAAACCTTATAAGGAAATAAGTGATTTTGATAAAGTATTTTTCAAGGAAAATCCAACATTTAATGTTTTTATTCTACGAGTTACCATGTGTCAGCTTCATCCTCTAAATTCGCCCAATCTAAAATCTTAAAAAAAAGAAAAAAAAAATTACTTTCCTCTAATCCACGTTCCACCAAAAACCCGATCCCGTAATCCATGTTACCTTTTCGCCACACTTCAACAATTTCAATTACGGTTTTCCACTTTCTATTTCCTAGCTTCAGCCTTTTACGCACAAATTTAGCAACATTACGTTTCACTACTCGCTTTCTCTCCACGTCACGCGCGTACCGCGTGCGTGTTGGCCGCTCTGGGATCGTGCGGCGCAGAACGCGAGACAAAAAGCGCGGTGCGGCACACGACGCGTGGCACGGTGGTAGAGGGAGAGTAAAGCGACTCGCGGCACGCACACAAGGTGTTTGTTTGATCGATTAACGTGAGAGATAGATAGAGACAGGACGCGATTTTGGATGCACCGAAACAAACGCGTCAATAGGAAGAAAGTGACGCGTGTGCGCGTTATCGTTCCCTGAACCATGTTCACTCCCCCATTCACCAAACTGTCTGAAGGAACCATTCAAAAAATACCACAATTATTACCCATTGCATGAGTGAAATATTGCTCATGTCTCTTTACCCATCAACACTCTCACACTTGCTAACTCCTTTTGACTTGGTCATCACACTCTTTCCTTTCACTTTCACTTCCTTATGCAAAAGCGCGTTTCAACACCACTTTCTCTCATTTCTTTATTCCATCAAACAAACAAAATCCCTTACTACCACATCTAAATAATTTATCAATTCAATAAAAAAAAAAGGCAAGCGAGTGTAACATACGTGAGTTGAGAAGAGAGTGAATTAGGTTAAAAGCCGGCACGCATGAAACCCCACCTTCGCCGCTTGTCTCGAAACTCCCGCGTGCCACGTAACCCTCTATTTCCTTTGGGCGGCGTCTCTCTCTCTACTAACTCACACGTCACACCATACACACCATTCTTTCACTCCACCCTCTTTTTCTCTTTCTCTCTCTTCAAACCCACCCTACATTTTATATAAATACCCATCCCCTCCCTCTCACCCAACATCTATCTTTCTGCACTCTCTCTATTAACAGCTTTGCGTCACCA


Gene Sequence:
>Vu_25640(+)
ATGGTCGCCAAGGACAAAACGGTCATAAAGAATAAGAAGCCAAACAATGCTGCCGACGAGGTTCACTACCGCGGCGTCCGAAAGCGCCCCTGGGGCCGCTACGCCGCCGAGATCCGCGACCCCGGCAAGAAATCTCGCGTCTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCAGAGCCTACGACGCCGCCGCCCGCAACTTCCGCGGCCCCAAAGCTAAAACCAACTTTCCCCTTCTCCCCGACACCGCCGCCGCCGTCACCAACAACAACAACGTTAACCGGAACAACAACAACAACAACGTAACAAACAACGCTAGCAGCAGCAGCAGCCCTAGCCAGAGCAGCACCGTCGAGTCCGCCACCCCGGAGCGTGACGTCACGCGCCTCGCCGCCACTGCCGTCATCGACCGCTTCCCCTTCCTCCCGATCCAGCAGCAGCTGCTCGTGGCCCCGGTTGCTCCCGTGCGCCCGGTTTTTCTCCTGGACCGCGCCCATTACCTCACCCATCAATTCCCCTTCCGGTTCGAACCGGCCCCGGTTCAGAGCGACTCCGATTCCTCCTCCGTTGTCGATTGCCAACCCAAAAGAGAACTCAATCTCGATCTCAACCTGGCTCCTCCTATGGATTATTAA