Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25572 LG6 23813963 23815071 leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G 23813966 missense_variant p.Pro2Ala
G/A 23813976 missense_variant p.Arg5His
T/C 23813992 synonymous_variant p.Gly10Gly
G/T 23813993 missense_variant p.Asp11Tyr
A/G 23813997 missense_variant p.Asn12Ser
C/A 23814010 synonymous_variant p.Gly16Gly
T/C 23814011 missense_variant p.Tyr17His
T/G 23814013 stop_gained p.Tyr17*
T/C 23814020 missense_variant p.Ser20Pro
G/A 23814023 missense_variant p.Glu21Lys
G/A 23814037 stop_gained p.Trp25*
C/A 23814038 missense_variant p.Gln26Lys
A/G 23814039 missense_variant p.Gln26Arg
G/A 23814056 missense_variant p.Ala32Thr
A/G 23814080 missense_variant p.Arg40Gly
C/T 23814149 intron_variant
C/T 23814179 intron_variant
A/T 23814216 intron_variant
T/C 23814236 intron_variant
C/G 23814265 intron_variant
G/A 23814477 intron_variant
C/T 23814512 splice_region_variant&synonymous_variant p.Pro53Pro
G/A 23814538 missense_variant p.Arg62Gln
C/T 23814564 missense_variant p.Arg71Cys
C/T 23814585 missense_variant p.Arg78Trp
G/A,* 23814607 missense_variant p.Arg85His
C/T 23814608 synonymous_variant p.Arg85Arg
G/C 23814610 missense_variant p.Arg86Pro
G/A 23814625 splice_donor_variant&intron_variant
T/G 23814639 intron_variant
T/G 23814646 intron_variant
G/A 23814698 intron_variant
G/A 23814760 missense_variant p.Val95Ile
C/T 23814762 synonymous_variant p.Val95Val
C/T 23814768 synonymous_variant p.Phe97Phe
T/C 23814779 missense_variant p.Val101Ala
G/T 23814787 stop_gained p.Glu104*
C/T 23814805 missense_variant p.Pro110Ser
G/C 23814824 missense_variant p.Ser116Thr
C/T 23814862 stop_gained p.Arg129*
T/C 23814874 missense_variant p.Cys133Arg
C/T 23814900 synonymous_variant p.Arg141Arg
C/G 23814905 missense_variant p.Thr143Ser
C/A 23814911 missense_variant p.Pro145Gln
A/G 23814934 missense_variant p.Ile153Val
A/G 23814956 missense_variant p.His160Arg
T/C 23814972 synonymous_variant p.Cys165Cys
C/T 23814978 synonymous_variant p.Asn167Asn
G/T 23814994 missense_variant p.Gly173Trp
A/G 23815005 synonymous_variant p.Arg176Arg
T/C 23815034 missense_variant p.Met186Thr
A/G 23815044 synonymous_variant p.Leu189Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25572.1
MPLLRHLHLGDNFFSGYIPSEYGTWQHLQYLAISSNELTRNILPELGNLTTLHPVDPILMGSDLGLQPCDDVVLVCVLGLHIFLNAVLGCIKNHAVSFDDHVVDECCEFMPAAEDNSLEAVIYAAYNCHRNFHCKEIDDESRSTPPPTATFTTISPHLQMHKRSSCRNRRIGCGHSRNNWGGESRSMMNLLWNSLDAQ*


CDS Sequence:
>Vu_25572.1
ATGCCCCTCCTCCGCCACCTCCACCTCGGTGACAACTTTTTCTCCGGCTATATTCCTTCTGAATATGGCACCTGGCAGCACCTCCAGTACCTCGCCATCTCCAGCAACGAGCTCACCAGAAACATCCTTCCGGAGCTTGGAAACCTCACCACGCTTCATCCGGTTGATCCGATCCTCATGGGGAGCGATTTAGGTTTGCAACCGTGTGATGACGTCGTTTTGGTTTGTGTTCTCGGACTCCATATTTTCTTAAACGCCGTACTGGGTTGTATTAAGAACCACGCCGTCAGCTTCGACGACCATGTTGTCGACGAATGCTGTGAGTTCATGCCGGCAGCCGAGGACAACAGTCTAGAGGCCGTGATTTACGCCGCCTACAACTGCCACCGAAATTTTCACTGCAAGGAGATCGACGACGAGTCCCGCAGCACCCCTCCGCCGACGGCTACCTTCACTACCATCTCGCCACACCTACAAATGCACAAACGAAGTTCATGTAGGAACAGAAGGATAGGATGTGGGCATTCGCGAAACAACTGGGGTGGAGAATCTAGAAGCATGATGAATCTACTGTGGAACAGTTTGGATGCACAATAA


Promoter Sequence:
>Vu_25572::LG6:23811963-23813963(+)
TTTCCTGAGCACTTTTATAAACAGATACTTTGAAAAAATCATCAATGGTTAGTGTAGATAAAATTATATTCCGAGCCTTAATATCAAATTGGGCTCTTCTATTTTCCTCAACAGTCCAGTCAAAATATGATTTTTCTACTTCTACACCATCAACTATATTTTTAGGAATATAAGGGCCATTTTGTACAGCTTCCCAGATACCTCTATCAACAGACCCCATAAAAATCTTCATTCTAACTTTCCAAAAAGCATAGTTATCACTAGTAAACAATGGAGGTCTATTAATGGAAGCACCCTCAGCTTATACATGGTTTTGATTATGACCAGCCATTTTCGCAAATTTTGAAAAACTATCAAAGCAAGCTCTGATACCAATTGATGGTATCGGAGGGGGTATTTTTCGAAGAGTATAGCGCAGCGGAATTAACACTCAGAGAGTGGAAAGCGTATTCGATCACAATTAAACTTAATTTGGTCCTTTTAGTAAAAATAATTTTCTTTCAGAAAATTAATCAAACAGTTGATATACGTAAAATAAAATGAGTGTAGGGAATAAGAAGATCAACACAGAATTTTTATCCTAGTTCGAATCAAAAGATTCTACGTCCAGTCGTTAATCACTATAAATAGTGATTAACCTTTTTCACTAAAAAATTGTTTAACAGATTACAAGATAATGAACAAGAATAAAATGAATAGAACCACTCTACCAACTTGAAGAGAACCGCTTCAGCAATCGACCAACGATTCACAAGCTTCTCCTTTCACAAGACCAGGCAGAGCACCTTGCTAACTTGAAGAGAGTCTGCTCCGACTATCGACACACGATACGCGAGCCTCTCCTTTCACAAGACCAAGCAAGGGAACAATGAACAAAAAGCTCTCTAAGAACGTTCCTCTGACACACAGTGTTCTAAGCTTTCTCAGTTCAAAAACGTTACTTTCTAATTTCTCCAAAACAAAATATATAGCCAAGTACACTGAGTGCCAAAGGTCAGCTCCCAACTGCCATGAATAATCGATTATTGTAAGTGATAATCGATTATTCAAGTCCGTTATAGGTTTTCAAAAATGTGATAATCGATTATATGAAGTGATAATCGATTATTCAAGTATGACTTGTGATAATCGATTATTGCTTAATCATAATCGATTATTGTAGTTAAAAATGCAAGTTTACAAGGTTTACAAGAATTTCCTACTACATTTAATTTCTACAAATTGCTTTTAACTAATTCTAATATCTTCTGCAACTAAAACTTCTTGTAGCATCATCAAAACAAATTTCTTCAAGATTTACCAATACTCCTTATTGGTAACAAAGAGAGCAAGAGTAAAACGATACCAATTGTCTAAATTAATTTTTAAGTTATTCAGCTAGTGTAACAAATATATTATGTTCAAATTACTATATAATCAAGATAAAAAATAAATAAAAAAATAAACAAGAGAATGTAAACTGGAATATGAGACAAGTTTTAACACTAACCTCTATTAAGGGATCCACTTGAGGCCTTCTTTTTTACAGGTTCTGGTGTAGTGTTTGTAGACCAAAAGAAAAATGGTAAAGAAAGACAATGATCTCAAAGGTCAAATTGCATCAATTTTAAAGATTGCGGGTTGAACTTTATTATCAGATTTTAATTAAGACGACCACTTTCTCATCATGTCCTTTAAATGAAAGAAAGCCAGCTAGAAAAATAAACAAATTTGGAATAATTTTTTGGTTTAATGTATTCGGAGGTCCCTATTTCTGCGGATTTGTATCAATTGGGTCCTCGTATTTTGAAAGTGCTCAATTGGGACCTTGTTTTAGTAAAATTGAACCAATAATACCCTTGCCGTTAATTTTAGTGGACGACGTTAGTTTTAGTGTATCGTGACATGCTGACCCAACAATTAATTATGACGTGGCGCATGTGATGGAATTTATTTATTTTGTTTTAAATAAAATCCTTTAAAACAAATTAGGGTCCACTTCCACCTCCCCGTCGCCGCCA


Gene Sequence:
>Vu_25572(+)
ATGCCCCTCCTCCGCCACCTCCACCTCGGTGACAACTTTTTCTCCGGCTATATTCCTTCTGAATATGGCACCTGGCAGCACCTCCAGTACCTCGCCATCTCCAGCAACGAGCTCACCAGAAACATCCTTCCGGAGCTTGGAAACCTCACCACGCTTCGTGAGCTCTACATTGGAAACCTCACTCTTCCTCTTCCAGATCCCCTTCTGACTTCAAACCTTCCTCACCTTCTTCTTCTTTTCCATTCTAATCATAATATTTTTATTTTTCTCAAATCACTCTCAGACATTCCAACAAAACAACACCAACTCCTCCATTAAACGGTAATCTCCTTCAGATCGATTCTCTTTAGTTTTTCATTTTTTGTTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTTTTTCATTTTCACGGTCATGTGTTGACGATTTCTCCCATTGTTTTGTCCGTTTGTTTCCAGCTTTGCAGAATTTGGAAAACTTTTCTTTAAATTGGTTTTTGGGAAGATCCGGTTGATCCGATCCTCATGGGGAGCGATTTAGGTTTGCAACCGTGTGATGACGTCGTTTTGGTTTGTGTTCTCGGACTCCATATTTTCTTAAACGCCGTACTGGGTTGTATTGTAAGAGGGGGATCTAGTGTGTGAAACAAAAAAAAATTGTCGGATTCCTTGAATCTGAAGCTCAAAAGTCGACGGCGAGGGACGGAAGGGGGCGTTCAGTGTCGCCGCGGTACGGAATGACAGAAGAACCACGCCGTCAGCTTCGACGACCATGTTGTCGACGAATGCTGTGAGTTCATGCCGGCAGCCGAGGACAACAGTCTAGAGGCCGTGATTTACGCCGCCTACAACTGCCACCGAAATTTTCACTGCAAGGAGATCGACGACGAGTCCCGCAGCACCCCTCCGCCGACGGCTACCTTCACTACCATCTCGCCACACCTACAAATGCACAAACGAAGTTCATGTAGGAACAGAAGGATAGGATGTGGGCATTCGCGAAACAACTGGGGTGGAGAATCTAGAAGCATGATGAATCTACTGTGGAACAGTTTGGATGCACAATAA