Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25522 LG6 22813758 22815573 PREDICTED: ethylene-responsive transcription factor 5-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/A 22813823 missense_variant p.Asp22Glu
G/A 22813886 synonymous_variant p.Glu43Glu
A/G 22813894 missense_variant p.Asn46Ser
C/T 22813901 synonymous_variant p.Asp48Asp
G/A 22813922 synonymous_variant p.Thr55Thr
C/T 22813949 intron_variant
C/G 22814004 intron_variant
G/A 22814042 synonymous_variant p.Ser65Ser
G/A 22814062 missense_variant p.Arg72His
T/A 22814064 missense_variant p.Cys73Ser
T/C 22814071 missense_variant p.Ile75Thr
C/T 22814128 missense_variant p.Pro94Leu
C/T 22814138 synonymous_variant p.Ser97Ser
C/G 22814153 synonymous_variant p.Arg102Arg
C/T 22814177 synonymous_variant p.Cys110Cys
G/C 22814216 synonymous_variant p.Ser123Ser
T/C 22814252 synonymous_variant p.Ser135Ser
C/G 22814257 missense_variant p.Thr137Ser
C/T 22814269 missense_variant p.Ala141Val
G/A 22814270 synonymous_variant p.Ala141Ala
C/T 22814302 missense_variant p.Pro152Leu
A/G 22814303 synonymous_variant p.Pro152Pro
T/C 22814329 missense_variant p.Ile161Thr
G/A 22814331 missense_variant p.Val162Met
T/C 22814350 missense_variant p.Val168Ala
G/A 22814351 synonymous_variant p.Val168Val
A/T 22814356 missense_variant p.Gln170Leu
A/G 22814382 missense_variant p.Lys179Glu
G/A 22814433 missense_variant p.Gly196Ser
G/T 22814434 missense_variant p.Gly196Val
A/G 22814436 missense_variant p.Thr197Ala
G/T 22814446 missense_variant p.Arg200Met
G/A 22814491 missense_variant p.Arg215Gln
C/T 22814513 intron_variant
G/T 22814518 intron_variant
T/A 22814607 intron_variant
G/A 22814638 intron_variant
G/C 22814655 intron_variant
T/A 22814714 intron_variant
C/T 22814717 intron_variant
A/T 22814777 intron_variant
C/T 22814824 intron_variant
C/T 22814851 intron_variant
C/T 22814853 intron_variant
A/T 22814862 intron_variant
G/A 22814881 intron_variant
A/C 22814888 intron_variant
G/A 22814930 intron_variant
A/G 22815066 intron_variant
T/C 22815076 intron_variant
C/T 22815114 intron_variant
A/C 22815129 intron_variant
A/C 22815210 intron_variant
T/C 22815251 intron_variant
G/T 22815356 intron_variant
T/C 22815510 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25522.1
MVVVNQHREIQDLKGKSEKNKDEEREKKGTFAFVQIEDLQASEAINDDGEVGIVTLGSKPQIIDLDTPNPLTLLHKKPQLNRKPFLQFSLPKKAEWIQFGIPHPNLAVVLLDNQPEKKHYRGVDQRPWGKFAAEICDPNKRGSRVWLGTFDTTIEAAKAYDRAAFRLRGSKVILNFPLEAGAISGTVEAEGERKRRHEEKEVEEVKPVVKKEKTTEHEI*


CDS Sequence:
>Vu_25522.1
ATGGTCGTAGTAAATCAGCATAGAGAAATTCAAGATTTGAAAGGCAAATCAGAGAAAAACAAGGACGAAGAGAGAGAAAAAAAAGGAACCTTTGCATTTGTACAAATTGAGGATCTTCAAGCAAGTGAGGCCATTAACGATGACGGCGAGGTCGGAATCGTGACGCTAGGTTCCAAACCCCAAATAATCGACCTCGACACCCCCAATCCCCTCACGTTGCTTCATAAGAAACCTCAATTAAATCGAAAACCTTTTCTGCAATTCTCTCTCCCCAAGAAGGCCGAGTGGATCCAATTTGGGATACCGCATCCCAACCTGGCTGTGGTATTGCTGGACAACCAACCGGAGAAGAAGCACTACAGAGGAGTCGACCAGCGGCCTTGGGGAAAGTTCGCCGCTGAGATCTGCGACCCGAACAAGCGCGGGTCGAGAGTGTGGCTTGGAACCTTCGACACCACCATCGAGGCCGCAAAGGCCTACGATCGTGCTGCCTTCAGGCTCCGTGGCTCAAAGGTCATTCTCAACTTCCCACTCGAAGCAGGCGCGATAAGTGGCACCGTCGAGGCCGAAGGTGAAAGGAAGCGGCGGCACGAGGAGAAGGAGGTAGAGGAAGTGAAGCCGGTGGTGAAGAAGGAGAAAACAACGGAACATGAGATTTAG


Promoter Sequence:
>Vu_25522::LG6:22811758-22813758(+)
GCTGTGTGAAAGTCCAAACAATGGTCCAGACCCCTCAAACACTCGCTGAGCGCACCCATTCGCTATTCGAATAAAACTCACAGTGCTCCCATACCTCAACTAGTCACTCAGCGCACCTTCTCGTTGTGCGAATAATCAAACAGTGAGCCAACCTCTAAAAACACTCGCTGAGCGACTCCACTCGCTCAGCGAGTCTACATAATCTACACCACCAATTCTGCATAATTACGCAACCTACACCAAGTTTACCAATTCCAACCATTTTTTCCAACTTCTAACCTTCCTAGATTGTGTTATATACCTAAATATACTTAACCAATGCTCTCTAAACACTTTTAACCTCAATCTAAACAAGTAGACTCAAAATCTCACCCAAAAACTTATAAAAACTCAACTTAGAGACTCAAATTGAATTCTACCATTTGTGTCATAATTCTAAGCAACTTAGAGACTCTAACAAATCCCAAATGACTTACCAAGACTTCCCAAACTGACCATTTGCACATAGAACTCCAAACTCAAGTTTTCAATACCTCACTTCCTCCAAATTAAGTTCTAACACAAGTAGAACTCTACCTCATTACCACCACACTCTACTAACTCAAATCTCCAACATCACCAATTATTAAACAAACCCACACCAGTTCATAAACAGCCCCAAATTCACCAAATCAGTTCAACAACCCTTTTTTTTCCTTTTTCACTACCTTAAGCTTCTTCTTACACTAAACAACCACAAACAAAGATTTCTTTTCCACTATAACAGTCCAATTATGTACAATTCAATTCAACCACATCAACTACAACATCATAAACATACATATACCAGATTCCACACATGACCAACATCCATCAACATATAAAACATGCATTCCACGCAATTACCACTAACAAAATCACGTTTTCCACTCCAACAGTTTAATTATAATAACCATCAAACTCATTCCACATGTTTCTATTTAAAAGAAGTTAACTACCTTCCCTTACCTTAGAGAAATGCGACACAGCTTTAGAAAACCCCGACCGATGCTTGCACTGCAAGGAAACTCTAGAAAAACCTACAAATCACCGACTGGTGATAGGAAACCAACCTTAGAACCTAAATTGAGCTAAGAGTCGAGAAAGAGAGACACGATTCTCATGCAAAGACAAAAAATCTGCATAATCACAAATTTTAAGGAAAACTTAGAAAAGAGGAACAAAACTTATTGGCTCAAATCAAGAAATTGATCGGTTGAAAAGGTAGCTCTCGACGCCAGAATCGCCTAGACACTTCCTGATCGTCGAATAGATGACCCAAAGATGAGAAAGTGTAAAGAGAAGTGAGAGAAAGGGAAGAGAGATAATTACTCACTCTCATAAACACTCATTGATTTAGTATTTTTTTGTGTATATGTATAATTGATACAATGTCATTCTACAAAAGGAATAGATAACTCTTATGGACTATGATATGTTAACAACTTTTTGGTTAAACCCCTTCGAAAGTTCCTATTTACATGGGTTTTTTGTAGTTAGATCCCTGTTTTATTGGATTTTCCAATTTAGTCCTAAAAAAAGAAAATTTAAATCAATTGAGTCCTTGCCGTTAAATTCGCTTAACAAGGTTAAGTTTTTTATGAGCTAGAGCATTGACATGGTCTGTTTTTTAAACGTGGCATTCATAGAGCATACGTGACCAGTTTTCTTAAATTTGACATGAAAAATGTTTGATTAAAATTTTTTAAAAAAAGTCACCTTCCATTACAATCAAGCACCACCCAAAAATCTTCTTCCCTGTACCCAGACCCTAAATTCAGCAATAGCTTTCATTCCAGCATCTGTAATTCCTACACATTACACAACAATAATGCCCTGTTAATAATAAAACTTGAACCCTCTAGATTAGAAAAAATAACAAACTAATTGAAGGACACCCTTTAAAAGTGATGTCAAATCTTTGTTTTTAGTCCACCGTCCATGGAAGTTAACTTAGCAGAAACATATAGAAAAATAATCAA


Gene Sequence:
>Vu_25522(+)
ATGGTCGTAGTAAATCAGCATAGAGAAATTCAAGATTTGAAAGGCAAATCAGAGAAAAACAAGGACGAAGAGAGAGAAAAAAAAGGAACCTTTGCATTTGTACAAATTGAGGATCTTCAAGCAAGTGAGGCCATTAACGATGACGGCGAGGTCGGAATCGTGACGCTAGGGTAAAAGGAACGAGAAACAGACTGAGCAAGGTCCAATTCGACCAAGCATGGCAAACGCAGCTGAAGTTTCAGCTTTCAATCGCATTAAGTTCCAAACCCCAAATAATCGACCTCGACACCCCCAATCCCCTCACGTTGCTTCATAAGAAACCTCAATTAAATCGAAAACCTTTTCTGCAATTCTCTCTCCCCAAGAAGGCCGAGTGGATCCAATTTGGGATACCGCATCCCAACCTGGCTGTGGTATTGCTGGACAACCAACCGGAGAAGAAGCACTACAGAGGAGTCGACCAGCGGCCTTGGGGAAAGTTCGCCGCTGAGATCTGCGACCCGAACAAGCGCGGGTCGAGAGTGTGGCTTGGAACCTTCGACACCACCATCGAGGCCGCAAAGGCCTACGATCGTGCTGCCTTCAGGCTCCGTGGCTCAAAGGTCATTCTCAACTTCCCACTCGAAGCAGGCGCGATAAGTGGCACCGTCGAGGCCGAAGGTGAAAGGAAGCGGCGGCACGAGGAGAAGGAGGTAGAGGAAGTGAAGCCGGTGGTGAAGAAGGAGAAAACAACGGAACATGAGGTGAACTGTTTTCGGGAGATGTCGTTAACACCTTTAACTTCAATCTTGAACCTAATTTGATTTTAGTAAACCCTAATTTGGTGGTGTTATTTCATATTTTACAAACTTTTTGGGTTTCATGAAAACCAAATTTCGTGGTCAACATCAATTGTTAGGGTTGAAGATGATGAAAGGTAAGGTTGAAGATGATGAACCCTAATTTTGGGTTTCAATTCTCATAATTTTTTTTAATTATATATTCCACGTATACAACGTAGAGAATGCCACGTTTAAAAAATTTGTCACGTCAATGTCCAGGTCATAAAAAACTTAATCCCGTTAAGCCAATTTAACGGGAGGGGCCCAATTGACTCAAATTTTCATTTTTTAGGACTAAATTGGGGAATCAAATAAAATGAGGATCTAACTGGAAAAAACCCATGTAAATAGGGACTTTCGAAGGGGTTTAACCCAACTTTTTTTAACAACTTTTTTGGTAATAGATTATATGTCACTATTTTATTGGTTCGTATATTTGAAATGAATCAATCACAAGCTACCACATAGACTGTTGTAAAAAAAAATTATTAAAAAAATATTTTCCAACTCTTATATATAGAATTATCTCATAACACAAAATATGATAAAAATTTAAATTTCATATACTTGAATTAATATAATATTTTCTCTTAATTCAATATTAACACTAATAATGTCTATTTCACCTCTCAATATTTTTATAAGAAATGGAATGTAGACTTTATATGCTTGTCACTTCCATATGACACAAATTTATTGGTTAAATTTATGGTTAACTTGTTATTTACAAGCAATTGAATAGACTTTTCAATCTCAACACTCATTTCACTCATTATGGAGACCAACCATACAACTTGACAAGAAAACTTGATTATGTTATATATTCGACCTCACATGTAGATAAAGCCACCACAAATTGCTTCCTACTTCACCAAAAGATTGGTGCTCCCATAAACATAACACATAGCCAATGATGCTTCTTTTGTTAATGTTATCACCACACCAGTTTGCATTAGAATAACAAAAGAACTTATTCTGCACTTGATTAGATTTAG