Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25333 LG6 18450788 18453562 PREDICTED: cysteine-rich receptor-like protein kinase 10
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C 18450844 missense_variant p.Lys19Asn
A/C 18450846 missense_variant p.Asn20Thr
C/T 18450850 synonymous_variant p.Thr21Thr
C/T 18450871 synonymous_variant p.Cys28Cys
G/C 18450988 synonymous_variant p.Leu67Leu
G/A 18450990 missense_variant p.Arg68Lys
A/G 18451003 synonymous_variant p.Glu72Glu
C/G 18451022 missense_variant p.Leu79Val
A/G 18451033 synonymous_variant p.Pro82Pro
T/C 18451035 missense_variant p.Ile83Thr
C/T 18451042 synonymous_variant p.His85His
T/C 18451045 synonymous_variant p.Ala86Ala
A/G 18451050 missense_variant p.Glu88Gly
C/A 18451066 synonymous_variant p.Ser93Ser
A/G 18451072 synonymous_variant p.Lys95Lys
T/C 18451080 missense_variant p.Ile98Thr
G/C,T 18451088 missense_variant p.Gly101Arg
G/A 18451106 missense_variant p.Gly107Ser
G/A 18451111 synonymous_variant p.Leu108Leu
G/A 18451132 synonymous_variant p.Glu115Glu
A/G 18451137 missense_variant p.Asn117Ser
A/T 18451140 missense_variant p.Lys118Met
T/C 18451147 synonymous_variant p.Tyr120Tyr
G/C 18451158 missense_variant p.Gly124Ala
G/T 18451181 stop_gained p.Glu132*
A/C 18451182 missense_variant p.Glu132Ala
G/C 18451192 synonymous_variant p.Gly135Gly
T/A 18451193 missense_variant p.Leu136Met
T/G 18451198 synonymous_variant p.Val137Val
G/C 18451206 missense_variant p.Ser140Thr
G/A 18451209 missense_variant p.Arg141Lys
G/A 18451228 synonymous_variant p.Gly147Gly
G/C 18451267 synonymous_variant p.Pro160Pro
T/C 18451273 synonymous_variant p.Phe162Phe
A/G 18451275 missense_variant p.Tyr163Cys
T/C 18451276 synonymous_variant p.Tyr163Tyr
G/A 18451285 synonymous_variant p.Lys166Lys
T/C 18451334 missense_variant p.Tyr183His
T/A 18451336 stop_gained p.Tyr183*
C/T 18451349 missense_variant p.Leu188Phe
C/T 18451354 synonymous_variant p.Asn189Asn
A/T 18451361 missense_variant p.Thr192Ser
T/C 18451373 missense_variant p.Ser196Pro
T/C 18451375 synonymous_variant p.Ser196Ser
A/G 18451383 missense_variant p.Asn199Ser
C/A 18451385 missense_variant p.Pro200Thr
C/G 18451386 missense_variant p.Pro200Arg
A/G 18451393 splice_region_variant&synonymous_variant p.Thr202Thr
A/T 18451427 intron_variant
A/T 18451429 intron_variant
T/G 18451442 intron_variant
A/C 18451454 intron_variant
A/G 18451488 stop_retained_variant p.Ter207Ter
C/G 18451492 missense_variant p.Gln209Glu
G/C 18451495 missense_variant p.Val210Leu
G/A 18451531 missense_variant p.Gly222Arg
C/T 18451560 synonymous_variant p.Cys231Cys
C/T 18451567 missense_variant p.Leu234Phe
T/C 18451570 splice_region_variant&synonymous_variant p.Leu235Leu
G/T 18451573 splice_donor_variant&intron_variant
C/A 18451603 intron_variant
T/A 18451627 intron_variant
C/G,T 18451630 intron_variant
A/T 18451632 intron_variant
T/C 18451633 intron_variant
G/A 18451647 intron_variant
G/C 18451653 intron_variant
C/A 18451655 intron_variant
G/T 18451664 intron_variant
C/T 18451677 intron_variant
G/A 18451704 intron_variant
A/T 18451746 intron_variant
C/T 18451756 intron_variant
G/C 18451768 intron_variant
T/C 18451812 intron_variant
C/G 18451815 intron_variant
G/A 18452077 intron_variant
C/A 18452146 intron_variant
C/G 18452189 intron_variant
G/C 18452274 intron_variant
A/G 18452275 intron_variant
T/G 18452304 intron_variant
C/A 18452331 intron_variant
T/C 18452350 intron_variant
G/T,* 18452463 intron_variant
C/T 18452475 intron_variant
G/C 18452513 intron_variant
T/C 18452546 intron_variant
A/G 18452622 intron_variant
C/A 18452720 intron_variant
C/A 18452727 intron_variant
T/C 18452872 synonymous_variant p.Ser273Ser
C/G 18452921 intron_variant
C/G 18452926 intron_variant
C/G 18452941 intron_variant
T/C 18452951 intron_variant
T/C 18453181 synonymous_variant p.Leu344Leu
G/A 18453227 missense_variant p.Arg359Lys
T/A 18453232 missense_variant p.Ser361Thr
A/G 18453252 synonymous_variant p.Ser367Ser
T/G 18453259 missense_variant p.Ser370Ala
T/A 18453273 synonymous_variant p.Leu374Leu
G/A 18453275 missense_variant p.Ser375Asn
T/A 18453281 missense_variant p.Val377Asp
T/G 18453306 splice_region_variant&synonymous_variant p.Pro385Pro
G/T 18453308 missense_variant&splice_region_variant p.Arg386Ile
G/C 18453314 splice_region_variant&intron_variant
A/T 18453328 intron_variant
T/G 18453329 intron_variant
A/T 18453349 intron_variant
G/A 18453356 intron_variant
C/T 18453359 intron_variant
T/A 18453364 intron_variant
T/G 18453366 intron_variant
A/T 18453368 intron_variant
C/T 18453389 intron_variant
C/G 18453393 intron_variant
C/G 18453395 intron_variant
T/A 18453397 intron_variant
C/T 18453398 intron_variant
T/C 18453406 intron_variant
A/T 18453424 intron_variant
G/A 18453426 intron_variant
C/T 18453435 intron_variant
T/A 18453441 intron_variant
C/A 18453445 intron_variant
A/T,* 18453458 intron_variant
C/T 18453460 intron_variant
A/T 18453465 intron_variant
G/C 18453474 intron_variant
T/C 18453505 intron_variant
T/C 18453507 intron_variant
G/A 18453523 intron_variant
T/A 18453530 intron_variant
A/C 18453533 intron_variant
C/G 18453545 synonymous_variant p.Leu387Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25333.1
MSSDAATSKGYNYTSIGNKNTVYGLYNCRGDVVGYFCQFCVSNAAREIPQHCPNRVSAMVWYDFCILRYSNENFFGKILTHPIWHAVETKNISNKEEIKKGEDFMRGLIRKATVETNKLYYMDGFNLSFTQERYGLVQCSRDLTNDGCRECLEAMLAEVPKFYEQKLGWFIWSGTCMIKYDDYMFYLLNNQTSSISVSNPETDKHGGKNRSKILIMSFFSVMGSTTLLCLGAYFFCGYMAPEYAMQGLFSVKSDVFSFGVLVLETICGRKNNGFYLSEHDETLLLYAWRIWCEGKCLELMDPMLENSFKASEVEKCIHIALLCVQENATYRPTMSDVVVMLGSDRLTLPKPKHPAFSVGRRFSEEVPKSKRSKNLLSTVVTISITLPRTLLFFE*


CDS Sequence:
>Vu_25333.1
ATGTCCTCAGATGCAGCCACAAGCAAAGGTTATAACTACACCAGCATAGGAAACAAAAACACCGTGTATGGCCTCTACAATTGCCGTGGTGACGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTAATGCTGCCAGAGAAATTCCTCAGCACTGCCCCAATAGGGTGTCTGCTATGGTGTGGTATGATTTCTGCATTCTGAGGTACTCAAATGAAAACTTCTTTGGGAAAATTCTTACACACCCAATATGGCACGCTGTTGAAACAAAAAACATTTCCAACAAAGAAGAGATTAAGAAAGGTGAGGATTTTATGAGAGGCTTGATCAGAAAAGCAACTGTAGAGACCAACAAGTTGTATTACATGGATGGCTTCAATTTGAGTTTCACTCAAGAAAGGTATGGGTTGGTTCAATGCAGTAGAGATCTCACAAATGATGGGTGCAGAGAGTGTTTGGAGGCCATGTTAGCAGAAGTTCCGAAATTTTATGAACAAAAGTTAGGATGGTTCATTTGGTCTGGAACTTGTATGATAAAGTATGATGACTATATGTTCTACCTTCTTAACAACCAAACATCTTCAATTTCTGTGTCAAATCCGGAAACAGATAAACATGGAGGTAAAAACAGGTCAAAAATCTTAATCATGAGCTTCTTCTCTGTGATGGGGTCAACAACCCTTCTATGTTTGGGTGCATATTTCTTTTGTGGATACATGGCTCCTGAGTACGCTATGCAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTAGTTCTGGAAACCATTTGTGGAAGAAAAAACAACGGATTCTATCTGTCAGAGCATGATGAAACTCTTCTTTTATACGCTTGGAGAATATGGTGTGAAGGAAAATGTTTGGAATTGATGGACCCAATGCTGGAAAATTCCTTCAAAGCCAGTGAAGTTGAGAAGTGCATACACATTGCATTGTTGTGTGTTCAAGAAAATGCAACGTACAGACCAACCATGTCAGATGTTGTTGTAATGCTAGGGAGTGACAGATTGACCCTTCCAAAACCCAAGCACCCAGCATTTTCTGTTGGAAGAAGGTTCTCAGAGGAAGTACCAAAATCAAAAAGATCCAAGAATCTTCTTAGTACTGTTGTAACAATCTCTATTACTTTACCTAGGACTCTTTTATTCTTCGAATAA


Promoter Sequence:
>Vu_25333::LG6:18448788-18450788(+)
TTACCGCTGATCGACATTCTTATGGGCTTGGGCTTACTTTTCTGTAACTTTTAGAATACTATATAAGGTTTTAGTTAACCTAGGTCAAGCATATTTGGCTGGAACAAAGCAGAAACACGTTCTTTCACCCCTTGGAGGAGGATTTTGGATGCTATAGCTCCTTTCTCACCTTTCTAGGGTTTTATCTTCCACTCTTTCATTGTATTTCATCTAGTTTCACCATGAATATGGTGAACTAAACTTTTATTATTGTTGGGGAATCAATGTAATCCTTTGAAACTCTCATGTATTGAATTTGTTCTTCAAGATCTTTTAAAGATACATGCTTTCTTTCATTAATTGTTAGGGTTTTTCCTCTTTGCTCTAAGCTTGCATTGTTTAACTCATTCGATGTCATGATTATTGATTTTGTCGATATGGACACATACGGGGAAATCTAGTTCTAGGGAATCTCTCCCAATAGTAGTATAAACCTAGACATAGGAGTATGATGGTTGGTTGCCTTTAAGCTTCTGTGCTTTATAATGCATGAGTAATTGCTAGGGAGACAAGACATTGTAAACTAGTGATTATGATTAGGCTTTCTTCGCCGAGACATCGGGTTTAAGATAATTGAGAAAGTGGTATTAACAATTAATGAAGAAAGATGAATTCTAGAATACATGAGAGTGGATAGGATGAAATTGATAAACCCCAACAACATATTCATTCATATATTTCATACCACGTGTTTTGTTTCTTCTTGTTCATTGATCAATTCATGCATTCATATTTACTTTTTAGTATTTTGCATTTAAACCTACAATATTTTGGTCACAAGTCTTAGATAATCAACCAATCACATAACTATCTAGGCCGTGAGTCCTTTGGGAGAACGATACTTGGTCTTACCAATTTTATTACTTGATACGATTCGGTCACACTTGCCGAGGGTTTAACACTAACCTCATCCGTCATTGAGTTCTCAATGTTACTTTTGGGATATTCGAGATCTTTTCCATGCTAGTGACGAGCATGTGGCTCAAATTCCCATCTTCGATCGTAGTGTCTTCTAGTTGCTTCACAACCTCCTTCATTTTGCAAATGAAATTGTCTTATAGACAGCCAAACTCATTGTGCTTCTTTATAGCCTCATGAGCCAGTGTCTTTAATCGGTTGAACGAAACCTGCAATTTTGACTTTGTATTTTCTGCGGCAATGCACGCTTGACACTCCTGATCGAGTAATGCAAGAACCTCATGAAATATCCTGATGGAGACATAACCCAAGGAGGGAGTCTTTGTCGCTATAGGAATCAAATCATAATAGTCATCATCGTTATCATCCTCGTTATCGTCTTCGACATCATCAACTTCATTCTCAGAATTGTACTCTTTATTATCATCAACATTTTTAAAATAATTTTGTGTAACAAAATTTGTGAGAAATATATGATGTAAATATTTTAATGAAAAAATAAACATGAATGAAAATAAGTTCAAAAGATTATTAAGATTTTTATAAATTTTAACAATTATTTGATATTTAAATATTTTTTTTAATACGATGATAATTGAATGCTTTATTAAAAAATTTTAGTAAATTTAAATTATCTTATAAAAAAATATTTGAAAAATCAAACAATTTGAAACGAGAAGAATTCAAATTGGAATATGTAAGATTGTCTAAAATAACATTATGAGAGCGGACTTGTAAAGATATGTTGACAGAAGACAATGACATTTTGGGTTGACTATAAAACATGTAATATCAAAATGAAAGTTTTTATTTCATCTTCCGAGAGAATAACCGAAGAAAGTCTATATATGGATGCAACATGGTGGGAACACAACTAAGCGTGAGATCAATATGCTTTGGTTTCTTGTTATCTTTGAGTTGCAGTTCGTTCAGTTTTACAAAGGCACAAACACCAATTTACCAGGGAAGTTACTGCCAAAACACCACCCAAGAACATCTCACCACTGCATACAAAAGCAATCTTGAGATAATCCTCTCATGGA


Gene Sequence:
>Vu_25333(+)
ATGTCCTCAGATGCAGCCACAAGCAAAGGTTATAACTACACCAGCATAGGAAACAAAAACACCGTGTATGGCCTCTACAATTGCCGTGGTGACGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTAATGCTGCCAGAGAAATTCCTCAGCACTGCCCCAATAGGGTGTCTGCTATGGTGTGGTATGATTTCTGCATTCTGAGGTACTCAAATGAAAACTTCTTTGGGAAAATTCTTACACACCCAATATGGCACGCTGTTGAAACAAAAAACATTTCCAACAAAGAAGAGATTAAGAAAGGTGAGGATTTTATGAGAGGCTTGATCAGAAAAGCAACTGTAGAGACCAACAAGTTGTATTACATGGATGGCTTCAATTTGAGTTTCACTCAAGAAAGGTATGGGTTGGTTCAATGCAGTAGAGATCTCACAAATGATGGGTGCAGAGAGTGTTTGGAGGCCATGTTAGCAGAAGTTCCGAAATTTTATGAACAAAAGTTAGGATGGTTCATTTGGTCTGGAACTTGTATGATAAAGTATGATGACTATATGTTCTACCTTCTTAACAACCAAACATCTTCAATTTCTGTGTCAAATCCGGAAACAGGTGAATCTGAATATGATAACAGTACATTTGGAATATTTTTTATTTAGTTTTAAAAATTTATTTTTTATGTTGTTGCAGATAAACATGGAGGTAAAAACAGGTCAAAAATCTTAATCATGAGCTTCTTCTCTGTGATGGGGTCAACAACCCTTCTATGTTTGGGTGCATATTTCTTTTGGTACAGAAGAAGAGGTAGAAAAGATAATTTCCTGCAGTTTCTCCTACTTAAATATGGCTATTTTGTTCAAATAAGACTCAGACACTTGTCTGTGTAGATGGGATCCGGCTGTCATCATTTCATAAAATTCAGACTGAGGAAATGTTGAACACTGACCTGCCTATAATCCCATTAATCACAATTCTGCAGAGTACTGATAACTTTTCAGAAGCATCTAAATTGGGGGAAGGTGGATTTGGTTCCGTTTACAAGGTTTTCATCATTTGAATTTATGAAAGATATTATTTATTGCTTCCATCTATTTCTATGATTCTTTTATCCCAAACTTTTATCAGGGGATTCTACCAGATGGAAGACAAATAGCAGTCAAAAGGCTGTCAGAATTTTCTGGTCAAGGTTCAGAGGAGTTCAATAATGAAGTAATGTTTATAGCTAAATTGCAACATCGAAACCTTGTAAGACTCTACGCATGCTGCTTGGAGCAAAACGAAAAGATACTTGTATGCGAATATATGCCAAACTCAAGTCTGTACTTTCACCTGTTTGGTATGTTTTCAGATTCCTTCAATGATTCTTTAGTAAAAGTGCCTAAGGTAGTTTGTGTAGTCTGTACTTTCCTCTTAAACATAGTTTAAGTTCAAAATTTGTATCAGTTAAAACGTCAACTGAGGGTTTTAATTGTTGGGTTCTTTCAAAGGGAAGAGTGGGAAATGCTATAATATATTTGATTTTTTTTCCGTGCTAAGGCAAATACTTAGCATTTGCTGTTTTGCTAAATGGCTAGTGTTGTTTAAATCCTTCTATCTTCTTGAGTTGACAGATGATGAGAAAAGAAAACAACTTGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTCTGCTATACCTTCACGAGGACTCTCGACTCAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACCATGACATGAATTCCAAAATATCAGACTTTGGATTGGCAAAGGCATTTGAAATTGGACAGAACCAAGCAAATACAAAGCGAGTAATGGACACTTTGTGAGTTTTACTTATACCAAACATAACCTAACAGTTGGACTTGTGAATGCTTATTTCAGAAAAGATTAAATTCCTTGTTATAAACTTGAAACAAGAGACATTAACAAATCTCTATTGACTTGCATTAGTGGATACATGGCTCCTGAGTACGCTATGCAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTAGTTCTGGAAACCATTTGTGGAAGAAAAAACAACGGATTCTATCTGTCAGAGCATGATGAAACTCTTCTTTTATACGTGAGTCATCCCTCTGGTCTGATTAACAGTTATCATCAATACTTACTAACAGAAGTATAACAGTATCATTCACAAGTTAACTAAAAATAATTGCAGGCTTGGAGAATATGGTGTGAAGGAAAATGTTTGGAATTGATGGACCCAATGCTGGAAAATTCCTTCAAAGCCAGTGAAGTTGAGAAGTGCATACACATTGCATTGTTGTGTGTTCAAGAAAATGCAACGTACAGACCAACCATGTCAGATGTTGTTGTAATGCTAGGGAGTGACAGATTGACCCTTCCAAAACCCAAGCACCCAGCATTTTCTGTTGGAAGAAGGTTCTCAGAGGAAGTACCAAAATCAAAAAGATCCAAGAATCTTCTTAGTACTGTTGTAACAATCTCTATTACTTTACCTAGGTAATGTATAATTACAAAAATGATTTGTCTCCTCAAAAGTAACATTAGAGCTGTATTTAACAGAAATATAAATGTAGTATCACACGCATCATTGTTATCAATGATTGAGATTTACACGTGTAGTTACTTATTTAGACATATAACACTTCAACAAATAAGAATATTGTATAATCATTCAGCATCTCTTATTATATAGTATATATATGAATACTATGGGATATTTTAATGGTAGGACTCTTTTATTCTTCGAATAA