Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25277 LG6 15802370 15804614 PREDICTED: pollen receptor-like kinase 4
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth, protein phosphorylation, regulation of pollen tube growth, protein phosphorylation, regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth, protein phosphorylation, regulation of pollen tube growth
Cellular Component   located in   mitochondrion
Molecular Function   enables   protein binding, protein serine/threonine kinase activity, protein binding, protein kinase activity, ATP binding, kinase activity, protein binding, protein kinase activity, protein binding, protein binding, protein kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, ATP binding
SNP Position Effect Amino acid change
G/T 15802762 stop_gained p.Ser558*
C/T 15803282 missense_variant p.Val416Ile
A/C 15803476 missense_variant p.Val351Gly
G/T 15803478 missense_variant p.Ser350Arg
T/C 15803865 synonymous_variant p.Pro250Pro
T/C 15803947 missense_variant p.Tyr223Cys
C/T 15803953 missense_variant p.Ser221Asn
T/C 15804547 missense_variant p.Asn23Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25277.1
MGARSASVVRAPFMNVKLKLWLNMVKGNVVVLVLASILISSSWCTSAKAMYSDAEALVKFKKSLTNTVALKSWDATTNSKPPCSGNIPNWVGLFCLRDKVWGLRLENMGLTGNIDIMTLASIPALRSVSLMNNTFVGPLPSVRLLPNLKALYLSYNHFSGQIPDDEFKGLHKLRKLYLSNNEFTGQIPSSIATLPSLLILRLDSNKFQGQIPLFQHFNTTSYYPLRIINFSNNQLEGPIPPSLITFGASPFSGNPGLCGAPLKNVCQEVATPSKMRLLKILLAIVTSALIVAILVIVLVIYRLRSLTSQLQQQSSAEDHMASTLQGQVQVPPIYVKTKSLADHYDASPRQASSFQGLGRARSRRVEPGKLIFLRPQEPMFDLQDLLRSSAEILGSAGFGSSYKAVILDGYPVVVKRYKHMNNLPREEFHEHMRRLANLNHPNLLPLLAYYYKREEKLLLSAFVHNGCLASHLHGNHNSQKLGLDWPTRLKIVKGIARGLAYLYSALPSVIVPHGHLKSSNVLLDESFEPLLTDYALSPVINLDHAQKVILPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYLTLRHNTDSDIASWVNTMITEKRTSDMFDVEMGGIGNCKAELLKLLKIGLSCCEENVERRLDIKEALEQIEDLKERENDAINGEYSSTLMTTERNTYRAV*


CDS Sequence:
>Vu_25277.1
ATGGGGGCGCGCTCTGCTTCGGTGGTGCGCGCACCATTCATGAATGTGAAGCTGAAGCTGTGGTTGAACATGGTTAAGGGTAACGTAGTTGTGTTGGTATTGGCATCAATATTAATATCATCAAGCTGGTGCACATCAGCCAAAGCCATGTATTCTGATGCGGAGGCGCTGGTGAAGTTCAAGAAGTCGTTGACAAACACAGTGGCCTTGAAAAGTTGGGATGCAACCACAAACTCAAAGCCACCTTGCTCTGGAAACATTCCAAACTGGGTGGGCTTGTTTTGTTTGAGGGACAAGGTTTGGGGGTTGCGACTCGAGAACATGGGCCTAACAGGCAATATCGATATAATGACTCTGGCTTCCATCCCCGCTCTCCGCTCTGTTAGCCTGATGAACAACACCTTTGTGGGTCCCTTACCTAGCGTAAGGTTGCTGCCAAATCTCAAGGCCCTCTACCTCTCCTACAATCATTTCTCAGGACAGATTCCCGACGATGAATTTAAGGGTTTGCATAAATTGAGGAAACTTTATTTGTCCAATAATGAGTTCACAGGTCAAATTCCTTCCTCCATTGCCACCTTGCCTTCTCTCCTCATCCTCCGTCTCGACTCAAACAAGTTTCAAGGTCAAATCCCCCTCTTCCAGCACTTTAATACTACTAGTTATTATCCTTTGAGGATCATCAACTTTTCTAACAATCAGTTGGAGGGTCCCATTCCGCCCAGTCTAATCACCTTCGGCGCCTCCCCATTTAGCGGTAACCCTGGACTATGCGGGGCGCCCCTCAAGAATGTGTGCCAAGAGGTAGCCACTCCGTCCAAAATGCGTCTTCTAAAAATTTTACTAGCTATTGTCACGAGTGCATTGATTGTAGCCATCCTGGTTATAGTATTGGTGATATATCGGTTGAGGTCATTGACATCCCAACTGCAACAACAATCTTCAGCAGAAGATCATATGGCTTCAACGTTGCAGGGCCAGGTCCAGGTTCCTCCCATTTATGTCAAAACTAAAAGCCTAGCGGATCACTACGATGCTAGTCCCAGGCAAGCGTCATCATTTCAGGGTCTTGGACGTGCACGTTCCAGGAGGGTGGAACCAGGCAAACTCATATTCCTCAGGCCTCAAGAACCTATGTTTGATTTGCAGGATTTGCTAAGGTCCTCCGCTGAAATTCTTGGAAGTGCAGGATTTGGGTCCTCCTACAAGGCCGTCATTTTAGACGGTTACCCCGTTGTTGTCAAGAGGTACAAGCATATGAACAATTTGCCCAGAGAGGAGTTCCACGAGCACATGCGAAGACTAGCCAATCTCAACCATCCCAATCTTCTCCCTCTCCTCGCCTATTATTATAAAAGGGAAGAAAAGCTTCTCCTCTCTGCCTTTGTTCACAACGGTTGCTTGGCCAGTCATCTTCATGGCAATCATAACTCCCAAAAGCTTGGACTTGACTGGCCAACTCGTTTGAAAATCGTGAAAGGTATAGCCAGGGGTTTGGCTTACCTATACAGTGCACTCCCAAGTGTAATTGTGCCTCATGGTCATCTCAAATCTTCCAACGTCCTTTTGGATGAATCCTTCGAGCCCCTTCTCACTGATTATGCCCTCAGCCCTGTCATCAACCTTGACCATGCCCAAAAAGTTATCTTGCCTTACAAATCTCCAGAATATGCTCAACTTGGGCGCATTACAAAGAAGACTGATGTGTGGAGTTTTGGAATTCTGATTCTGGAGATCTTGACGGGCAAATTCCCTGAGAACTATCTCACACTTAGGCATAATACTGATTCTGACATAGCCAGTTGGGTCAATACCATGATTACTGAGAAACGCACCAGTGACATGTTTGACGTAGAGATGGGAGGAATTGGAAATTGTAAAGCTGAATTACTCAAACTCCTGAAGATTGGCTTGAGTTGTTGTGAGGAGAATGTGGAAAGAAGGCTTGATATCAAGGAAGCTCTTGAGCAAATTGAAGACTTGAAAGAGAGGGAAAATGATGCTATTAATGGAGAATACTCCTCCACTCTCATGACCACAGAAAGAAATACTTACAGAGCTGTCTGA


Promoter Sequence:
>Vu_25277::LG6:15804614-15806614(-)
AAAGAGGTGTCATGTTTCAGTTGATTTTTTTGATTTTTGAAGTATTTTATTTTTTATTTATTTTTAATTTTTTTTAAATGTTACATGTCAAACTAATATTATACCATGTGACAAGTGTGACATGACACTGACAGTACACGTGTCATTGTAAGGTCACGTGTCATTGCATTAGTCTGGTTCCTGTATTTTTATTGTGTCTCAATTTGAACCATGTATTTTTATTTTGTCTCAATTTAGTCTTAATTTTAAAAATTAAACAATTTTGTTCTTCCTCAAATTCAAACAAAATTTAAATTGTTTATAAATCTTAACAAATATTGATGTGAAATTTCACTCTTTTTTTTAAATAAAAAATTGAAGAAAGTTTTTGTGAAAATAGTAATTAAAGATGGTTTTTTCTTTCATGATCTTCCATGAAAATTCACACCAGCATGTTATGTCACTCTTTTTTTAAATTCTTAAAGGTATATTTAAAAATAAAAATAGAGAGACTAAACTGAAACAAAATAAAAATACAATGACCAAACTGAGACTAATGCAATGACATGTGGTCTGATAGTGACATGTGGCACTGTCAGTGCCATGTCACACTATCATAGCCACGTGGCACAACATCAACTTGACATGTGTCATTTTTATTTTATTTTTTTAAAAAAATAAAAATAAATAAAAAAATAAAAACAAAAAATAAATAAAAAATATAAAACAAAAAATAAATATAAAATAATTCAAAAATTCAAAAAATCCAGTAACTGACATGTGATACCTCCTTTAACGGTGTTAGTACGAAAATAACGCTAATGACTTAATTGCTTTAATTTTTCAAAAATAAAAACTCAATTAAAAATAATAACTGAGAACGTAATTTAAACTTCTCAGCAAAATTAGAGACTCGAAAATGATTAAACCTCAATTTTATTATTTGAAAAAGCTGTAATGAACACATAAAAAGGTGATTTCTTTTAAAAAGAAATCATTGGTGGAAAATCTTAAACAAAGGGACCCATGATTTTAAATAAACACAAATTATTGCTTTAGTAAAGCTTTATTTTATTAATCACTGAAAATAAAATGATATAAATTTTAAAGAAAAATGAATATGATAAAGGGTCTCACAAAAATACGAGATATGGAAATCATCTTTTTTATAATAGATAATAAATTATTATTAGTATTATCTAGTTTTATTGACTTCACAACTAACTATTATATAATAGATGTTTATCTATGGCTTTTTTTTTAATTACTTGTTCTTTTGTATAAACATTATAAATTGATTGTGATATTTTTAGTATAAACAAAATCATTATGAGCAAACAGTTTTGACTGTACACCATTTACAGTTTATTGTAAATAAAACCATGTAAAATGTTGTTTATTTCTTACAATTTGAAGAAGATGGATATATAAAGGTAAAGTGGTATTGTGGTGCTCTTCCAATAAAAAATACCTCCGTTAATAATATAGTAATATATATTATATATTAGTAGTTTAAGTTACAAAATAAAAATAAAAAATAAAAAAAAATAATGCTATTTTGAGTTGTAAAAAGTGAGTTTCTTTCTCTCTTTTTTGAAAGAGCATGCGTGAAAAGGATATGGTAAATTTGGATGAGAATGGGTGGTTTGGTTGAAATTAGAAAAATGCATTGTAATGTAATCTAATAATGGAAAATGGAATTTCAATGAAAGACAAATAGCATGGGCTGAAAGAAAGAAGGAACAAAATCAGAGGACCTCCTTAGACCTCTCGCCCAAAATGAAGCTGTACTGAGACGCAAAAAAAGAATAGCACATTCTAAGCCTATTCCTTCTCATTTCTTCTCAATCTCTTCTTACTGCCCTCTCTGTTAGTCCTAACAGTTCCGTCACCATTGGCCTTCTCTGGCCACTAATGATCAAAGATGGTGCTGTATAGTAATAAAAATAAAAATAATAAAAAATAATAGTAAAAATGATGGTGATACAACTATCATTGTGATTCTGATTGGGAGGGTGAAA


Gene Sequence:
>Vu_25277(-)
ATGGGGGCGCGCTCTGCTTCGGTGGTGCGCGCACCATTCATGAATGTGAAGCTGAAGCTGTGGTTGAACATGGTTAAGGGTAACGTAGTTGTGTTGGTATTGGCATCAATATTAATATCATCAAGCTGGTGCACATCAGCCAAAGCCATGTATTCTGATGCGGAGGCGCTGGTGAAGTTCAAGAAGTCGTTGACAAACACAGTGGCCTTGAAAAGTTGGGATGCAACCACAAACTCAAAGCCACCTTGCTCTGGAAACATTCCAAACTGGGTGGGCTTGTTTTGTTTGAGGGACAAGGTTTGGGGGTTGCGACTCGAGAACATGGGCCTAACAGGCAATATCGATATAATGACTCTGGCTTCCATCCCCGCTCTCCGCTCTGTTAGCCTGATGAACAACACCTTTGTGGGTCCCTTACCTAGCGTAAGGTTGCTGCCAAATCTCAAGGCCCTCTACCTCTCCTACAATCATTTCTCAGGACAGATTCCCGACGATGAATTTAAGGGTTTGCATAAATTGAGGAAACTTTATTTGTCCAATAATGAGTTCACAGGTCAAATTCCTTCCTCCATTGCCACCTTGCCTTCTCTCCTCATCCTCCGTCTCGACTCAAACAAGTTTCAAGGTCAAATCCCCCTCTTCCAGCACTTTAATACTACTAGTTATTATCCTTTGAGGATCATCAACTTTTCTAACAATCAGTTGGAGGGTCCCATTCCGCCCAGTCTAATCACCTTCGGCGCCTCCCCATTTAGCGGTCGGTACCTTATAATGTTTCTCATTCATTTCATTACAATTTGGAATATGGAATAACTGAATCAATCTATCTATCTATCTAATAGGTAACCCTGGACTATGCGGGGCGCCCCTCAAGAATGTGTGCCAAGAGGTAGCCACTCCGTCCAAAATGCGTCTTCTAAAAATTTTACTAGCTATTGTCACGAGTGCATTGATTGTAGCCATCCTGGTTATAGTATTGGTGATATATCGGTTGAGGTCATTGACATCCCAACTGCAACAACAATCTTCAGCAGAAGATCATATGGCTTCAACGTTGCAGGGCCAGGTCCAGGTTCCTCCCATTTATGTCAAAACTAAAAGCCTAGCGGATCACTACGATGCTAGTCCCAGGCAAGCGTCATCATTTCAGGGTCTTGGACGTGCACGTTCCAGGAGGGTGGAACCAGGCAAACTCATATTCCTCAGGCCTCAAGAACCTATGTTTGATTTGCAGGATTTGCTAAGGTCCTCCGCTGAAATTCTTGGAAGTGCAGGATTTGGGTCCTCCTACAAGGCCGTCATTTTAGACGGTTACCCCGTTGTTGTCAAGAGGTACAAGCATATGAACAATTTGCCCAGAGAGGAGTTCCACGAGCACATGCGAAGACTAGCCAATCTCAACCATCCCAATCTTCTCCCTCTCCTCGCCTATTATTATAAAAGGGAAGAAAAGCTTCTCCTCTCTGCCTTTGTTCACAACGGTTGCTTGGCCAGTCATCTTCATGGTAATTATTACTTTGTTTAACTCCCTCTTTGCATCACTTTTCAGCTTGGGTATATATGTAGTAACAATGTTATTGTAATTACTAATCATGCAGGCAATCATAACTCCCAAAAGCTTGGACTTGACTGGCCAACTCGTTTGAAAATCGTGAAAGGTATAGCCAGGGGTTTGGCTTACCTATACAGTGCACTCCCAAGTGTAATTGTGCCTCATGGTCATCTCAAATCTTCCAACGTCCTTTTGGATGAATCCTTCGAGCCCCTTCTCACTGATTATGCCCTCAGCCCTGTCATCAACCTTGACCATGCCCAAAAAGTTATCTTGCCTTACAAATCTCCAGAATATGCTCAACTTGGGCGCATTACAAAGAAGACTGATGTGTGGAGTTTTGGAATTCTGATTCTGGAGATCTTGACGGGCAAATTCCCTGAGAACTATCTCACACTTAGGCATAATACTGATTCTGACATAGCCAGTTGGGTCAATACCATGATTACTGAGAAACGCACCAGTGACATGTTTGACGTAGAGATGGGAGGAATTGGAAATTGTAAAGCTGAATTACTCAAACTCCTGAAGATTGGCTTGAGTTGTTGTGAGGAGAATGTGGAAAGAAGGCTTGATATCAAGGAAGCTCTTGAGCAAATTGAAGACTTGAAAGAGAGGGAAAATGATGCTATTAATGGAGAATACTCCTCCACTCTCATGACCACAGAAAGAAATACTTACAGAGCTGTCTGA