Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25252 LG6 15599746 15603068 PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 15600047 downstream_gene_variant
C/T 15600102 downstream_gene_variant
T/C 15600257 downstream_gene_variant
G/T 15600637 downstream_gene_variant
G/A 15600774 downstream_gene_variant
C/A 15600779 downstream_gene_variant
G/A 15600874 downstream_gene_variant
A/G 15601010 downstream_gene_variant
G/A 15601030 downstream_gene_variant
T/C,* 15601048 downstream_gene_variant
C/T 15601069 downstream_gene_variant
C/A 15601154 downstream_gene_variant
T/C 15601253 downstream_gene_variant
A/T 15601302 downstream_gene_variant
C/T 15601873 missense_variant p.Gly399Asp
C/T 15601883 missense_variant p.Glu396Lys
G/C 15601885 missense_variant p.Pro395Arg
A/G 15601887 synonymous_variant p.Ile394Ile
G/A 15601891 missense_variant p.Pro393Leu
A/G 15601904 missense_variant p.Tyr389His
G/A 15601937 missense_variant p.Pro378Ser
G/A 15601954 missense_variant p.Ser372Leu
G/A 15601994 synonymous_variant p.Leu359Leu
G/A 15602003 missense_variant p.Leu356Phe
A/C 15602032 missense_variant p.Ile346Ser
A/C 15602042 missense_variant p.Phe343Val
G/A 15602057 stop_gained p.Gln338*
A/G 15602255 missense_variant p.Trp272Arg
C/A 15602257 missense_variant p.Ser271Ile
G/T 15602348 missense_variant p.Leu241Ile
A/C 15602359 missense_variant p.Phe237Cys
T/G 15602423 missense_variant p.Lys216Gln
T/G 15602629 missense_variant p.Glu147Ala
G/A 15602825 missense_variant p.Leu82Phe
A/T 15602832 missense_variant p.Phe79Leu
G/C 15602994 synonymous_variant p.Ser25Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25252.1
MSNSSTPPNECCIVTAKKASFYDQSHNMVFLQTLFLLLLVTFGHSFPRHHHHHHHPSHSLLTDRAALLEFRKTIVSDPFSSLANWDEAVPVCNFTGVECDRSHNRVIRLILYDKGLVGLLSPVLSNLTGLHNLEIVRSHLFGIIPPELSNLRRIHSIIIEGNNLHGSIPDSFAMLSKLNILVIKENNISGSLPPSIFSNCTLLNVVDFSSNSLSGKIPEEIGNCKILWSISLYNNQFTGQLPLSLTNLSLQHLDVEYNYLSGELPAKFVGSWPYLLYLHLSYNNMVSHDSNTNLDPFFTALKNNSNLEELELAGMGLGGRFTDTLPSQLTNIRTLLLQENQIFGSIPRSLANLSRLFILNLTSNLLNGTISSDIFTLPWLEQLFLSHNYFKNPIPEAIGKCLNLGLLDLSHNQFSGRIPDSLGNLVRLNSLFLNNNLLSGTIPPTLGRCSNLYRLDLSHNNLTGSIPLKLAGLREIRIFINVSHNHLEGDLPIELSKLEKVQEIDLSSNYLTGSIFPQISGCIAVSMINFSNNFLQGEIPQSLVGATDNMGNSSANLLFGSIGYIAPEKVVDPALVTASRDQSQDVRKMWEVAISELIELGLLCTQESPSTRPTMLDAADDLDRLKRYLNGDTAGTFASSLGISSSTIGGDC*


CDS Sequence:
>Vu_25252.1
ATGTCAAACTCTTCAACTCCCCCAAATGAGTGTTGCATTGTCACTGCTAAAAAAGCCAGCTTTTATGACCAATCCCACAACATGGTTTTCTTACAAACCTTGTTCCTCCTTTTACTTGTAACATTTGGTCACTCCTTTCCAAGGCACCACCACCACCACCACCACCCTTCTCATTCTTTACTCACCGATAGAGCTGCGCTTCTGGAATTCAGAAAAACAATCGTATCAGACCCGTTTTCCTCACTTGCAAACTGGGATGAAGCTGTTCCTGTGTGCAACTTCACGGGTGTTGAATGTGACAGATCCCATAACCGTGTTATACGACTAATCCTATATGATAAAGGTCTTGTGGGGCTCCTTTCACCTGTTCTTTCCAATCTCACTGGACTGCATAACCTTGAGATAGTTCGAAGTCACCTATTTGGTATTATTCCCCCTGAACTATCCAACCTCAGACGCATTCACAGCATCATCATTGAAGGGAATAATTTGCATGGCTCAATACCAGACTCCTTTGCCATGCTTTCCAAGCTTAACATTCTAGTCATTAAGGAAAATAACATATCGGGTTCGCTTCCTCCATCTATCTTTTCAAACTGCACTCTGCTAAATGTTGTAGACTTCTCCAGCAACTCATTAAGTGGTAAAATCCCTGAAGAGATTGGAAACTGCAAAATCCTGTGGAGTATCAGTTTATACAATAATCAATTCACTGGTCAGCTTCCTCTCTCGCTGACCAATCTATCGCTTCAACATTTAGATGTGGAGTACAATTATCTATCTGGCGAATTACCTGCTAAGTTTGTTGGCAGCTGGCCTTATCTCCTTTACCTTCATTTATCATACAACAATATGGTAAGCCATGATAGCAACACCAATCTCGATCCATTTTTCACTGCTCTCAAAAACAACAGTAATCTAGAGGAACTTGAATTGGCGGGAATGGGGCTTGGGGGAAGGTTCACCGATACTCTCCCCAGCCAACTCACCAACATAAGAACCCTGTTACTGCAGGAAAACCAAATTTTTGGATCAATTCCTCGCAGCTTAGCCAACCTTTCAAGGCTTTTCATTCTGAATTTAACATCCAATCTTCTGAATGGAACTATATCCTCAGATATATTCACATTGCCATGGTTGGAACAACTTTTCTTGTCACACAACTATTTCAAAAATCCAATTCCAGAAGCAATAGGCAAGTGTCTCAATCTGGGTCTATTGGATCTGTCCCATAACCAATTCTCAGGTAGGATTCCAGACAGTTTGGGAAATTTGGTTAGACTAAATTCATTGTTTCTCAACAATAATCTTCTCTCAGGAACAATACCTCCCACATTGGGACGGTGCAGTAATCTGTACAGGCTTGATTTATCCCACAATAATTTAACAGGAAGCATCCCACTGAAATTGGCAGGCTTGCGTGAGATCAGAATTTTCATAAATGTTTCTCATAACCACCTTGAAGGTGACCTGCCAATTGAGCTCAGCAAATTAGAAAAGGTTCAGGAGATAGATCTTTCGTCGAACTACCTGACTGGAAGTATCTTCCCTCAGATATCAGGATGTATTGCTGTTTCAATGATTAATTTTTCGAACAACTTTCTTCAAGGGGAGATCCCTCAGTCCTTGGTTGGGGCTACCGATAACATGGGCAACTCTAGTGCAAATTTGCTTTTTGGATCTATTGGATACATTGCACCAGAAAAAGTGGTAGATCCTGCTTTGGTGACAGCCTCAAGAGATCAATCCCAAGATGTTAGAAAAATGTGGGAAGTTGCTATTTCAGAGTTAATCGAGTTGGGACTTCTCTGCACACAAGAGTCTCCTTCGACAAGACCAACCATGCTTGATGCAGCAGATGACTTAGATCGTCTCAAGAGATACCTTAATGGAGACACAGCAGGAACTTTTGCCTCGTCTCTAGGAATTTCATCTTCCACAATAGGTGGTGACTGCTGA


Promoter Sequence:
>Vu_25252::LG6:15603068-15605068(-)
ATATTGTGTGTATAGGAAAGGGTTGTAATGCATGTTATTAAAATGGCATCCCACGCATAAGCTTGGTGGTTTTTTTTGTTTTGGATTAGAAGAAGCAGGTAGTAAAGTAATAAATGACTATGCCACTATAAGTATATGCGATAAACAAACATGGCGTACCTCATCTATTAGGCAACCAAAACCTTTAACCATACTAAACAATGCAAATGTTCCTTAAACAAATCCTTTCTCGGCAATATACACTTGTGCCATATATAGTTAATCACCAAACACCAACATCGTTAGAACCACGTACAGACTTTTGCTTAGAATATATTGGACATATTTTTTCCTATACTAAAATTTGCATAAAAACTACATGGCTGATTTTATATATACCAATTTAAATTCTATTTGTAACATTTTCAAAATATATACTATTTTTTTTTATAAAATAAAGCTAAGAAGAGAGAAGAGGAAAGGAAGAACAAAAACAAAGGTAAATTCTCATTTTCTAGATATATATATTTTTAGAAAAAGTCTTATTTATAATTCAAAATATAATTCAAGAGTTACAAATAGTTAATACAAATAACTAAATTAATCATAAATAACAAATCAATAGACAATCATTTATCCATAATACAAATAGCTAAGCATCACTTTATTATGGTTTAGTTATGCATATGTTGAATACCATTTTCTAATGATTTAACCATACACCACCTTAAATGTTGAACAAAGTTAATTCTGGATCTTTCCATGAATGTCTTTTTGGAGCTCAACTTCATATTTATGGAGCATAGCGGCATCCTCTTTGATTTCTTGAGAAATGGTCACAAAATTATCCAAAATTCATCATTTTTCTATTTTTTTTCTTTTCTTTTTTGCTTATAATATTTCATTATATAATTACAAGCTAAAAAATTCTTTATTTACAAAATATGATCAATTAAAACATAATAAATATCAAATTTATATGAAAAGTTTTTCTATTCTAGACACTTATTCTTAGATCAAAAGCTATAATTGTTAATTAAGATACAACTCATTTTACTGAAAAGCGTAATAGTCAAACATCATAATTCGATTTTGATTCGGATTACTTTATCTCCATCACAAAACAATTAATATCACTCACAATATATATATATATATATATATATATATATATATATATATATATATATATATATAACCAAAAAATATATACCTACTTTAATAATGCAATAATATATAAATAGTATAAGAATAGATTCTTCTCTTTCTCGAGGAACGAGATGAACAAAATATGACGAAAGTGAAGAAGAGTATATTTCTTCCAAGTAAATATTTGTCTCATTGTTGTAAATAATGTTCTAAGTAAAATTTGTTATCAATGTGATGTTTTCATCTTATGTGATTTAGAAGATATAGCGTAATATTAAAGACACGAGAAGAATAAACATTATTATAAGAATTTAAACTAAAATTTTATAATGTATTAAATACTTAATAAAGGAAAACAAATGAAAAAAATATGTAATTTCGCGAGTCCATAGAACTTACACGACGCTGAGTTGACGCATCCAACCACCTTAGTACCGAGGTTTTGTGTTCTTGTACGAATTCCACTGAAACAGTGACCCCAAGCAATTGTTTAGGCATATTAAGATTGTCAACTTCGTTTTCGTACTATGCTATGTGACGTTTGTGACAAACGCATGCTTTGCACAAGGGAAAAAAAATCTGCTATTTCTTTTAATATTTTTGGGTGCTTTGCAGCCATTCTTGCAATTTAAAATTTCTACTGGAAGGGAGTGTTCTTGAGTGCGCCACTGTTGAAAGCAGAAGCAAAGATTGCAAGCTGCGTTGGAAATTTGATGCGCAAAACAAAATGTTTGAGTTGAGATCATCTCCATCTTCTGTCTCCTCCCAACTTAGTTGAGAATCTACTCATCACCAGTCATGGATTTTTCTTCTTCAAATCATCATTGCATCTGCTCAATGTTTTCCACCATGCGACCATTTCCACCCGCGTA


Gene Sequence:
>Vu_25252(-)
ATGTCAAACTCTTCAACTCCCCCAAATGAGTGTTGCATTGTCACTGCTAAAAAAGCCAGCTTTTATGACCAATCCCACAACATGGTTTTCTTACAAACCTTGTTCCTCCTTTTACTTGTAACATTTGGTCACTCCTTTCCAAGGCACCACCACCACCACCACCACCCTTCTCATTCTTTACTCACCGATAGAGCTGCGCTTCTGGAATTCAGAAAAACAATCGTATCAGACCCGTTTTCCTCACTTGCAAACTGGGATGAAGCTGTTCCTGTGTGCAACTTCACGGGTGTTGAATGTGACAGATCCCATAACCGTGTTATACGACTAATCCTATATGATAAAGGTCTTGTGGGGCTCCTTTCACCTGTTCTTTCCAATCTCACTGGACTGCATAACCTTGAGATAGTTCGAAGTCACCTATTTGGTATTATTCCCCCTGAACTATCCAACCTCAGACGCATTCACAGCATCATCATTGAAGGGAATAATTTGCATGGCTCAATACCAGACTCCTTTGCCATGCTTTCCAAGCTTAACATTCTAGTCATTAAGGAAAATAACATATCGGGTTCGCTTCCTCCATCTATCTTTTCAAACTGCACTCTGCTAAATGTTGTAGACTTCTCCAGCAACTCATTAAGTGGTAAAATCCCTGAAGAGATTGGAAACTGCAAAATCCTGTGGAGTATCAGTTTATACAATAATCAATTCACTGGTCAGCTTCCTCTCTCGCTGACCAATCTATCGCTTCAACATTTAGATGTGGAGTACAATTATCTATCTGGCGAATTACCTGCTAAGTTTGTTGGCAGCTGGCCTTATCTCCTTTACCTTCATTTATCATACAACAATATGGTAAGCCATGATAGCAACACCAATCTCGATCCATTTTTCACTGCTCTCAAAAACAACAGTAATCTAGAGGAACTTGAATTGGCGGGAATGGGGCTTGGGGGAAGGTTCACCGATACTCTCCCCAGCCAACTCACCAACATAAGAACCCTGTTACTGCAGGAAAACCAAATTTTTGGATCAATTCCTCGCAGCTTAGCCAACCTTTCAAGGCTTTTCATTCTGAATTTAACATCCAATCTTCTGAATGGAACTATATCCTCAGATATATTCACATTGCCATGGTTGGAACAACTTTTCTTGTCACACAACTATTTCAAAAATCCAATTCCAGAAGCAATAGGCAAGTGTCTCAATCTGGGTCTATTGGATCTGTCCCATAACCAATTCTCAGGTAGGATTCCAGACAGTTTGGGAAATTTGGTTAGACTAAATTCATTGTTTCTCAACAATAATCTTCTCTCAGGAACAATACCTCCCACATTGGGACGGTGCAGTAATCTGTACAGGCTTGATTTATCCCACAATAATTTAACAGGAAGCATCCCACTGAAATTGGCAGGCTTGCGTGAGATCAGAATTTTCATAAATGTTTCTCATAACCACCTTGAAGGTGACCTGCCAATTGAGCTCAGCAAATTAGAAAAGGTTCAGGAGATAGATCTTTCGTCGAACTACCTGACTGGAAGTATCTTCCCTCAGATATCAGGATGTATTGCTGTTTCAATGATTAATTTTTCGAACAACTTTCTTCAAGGGGAGATCCCTCAGTCCTTGGGTGATCTGAGGAACCTTGAATCTTTTGATGTTTCACGAAATCAATTATCTGGATTGATACCAGCAAAACTTGGTAAAATTGAAACGCTCACTTTTCTCAATTTATCATTTAACAATCTGGAAGGAAAGATTCCATCTGGTGGTATCTTTAATTCAGTTTCAAACTTGTCATTCTTAGGGAATCCAAAACTCTGTGGGACGATTGAAGGCATATCTTTGTGCTCTCAAAGGAGAAGATGGAGTCATGCTCGTTTGTTATTGATTATATTGATTTTGGTGATCTTTGTATCAACCTTGTTGTCAATAATTTGCTGTGTAATTGGATGCAAGCATCTTAAAGTAATGATCAGCTCTCAGAGGACTGAGGCAAGCAAAAATGCAGCTAGAACAGAGTTGATTAGTAACTTCCCAAGAATCACGTACAAGGAATTGTCAGATGCCACTGGAGGATTTGACAATCAGAGACTTGTTGGATCAGGTAGTTATGGACATGTCTATAGAGGTGTTCTCGCGGATGGAACACCAGTAGCAGTCAAGGTGCTGCATTTGCAATCCGGAAATTCTACCAAGAGCTTCAATAGAGAATGCCAAGTTTTGAAAAGAATTAGACACAGGAATCTTATAAGGATTATCACAGCATGTAGCCTACCCGATTTTAAGGCTCTCGTTCTACCTTATATGGCCAATGGCAGCTTGGAGAGTCGCCTCTATCCTTCTTCTGGATCATCAGACTTGAGTATTGTCCAGAGGGTGAATATTTGCAGTGATATAGCTGAAGGGATGGCCTATTTGCATCATCATTCTCCTGTCAGAGTCATACACTGTGATCTAAAACCAAGCAATTGTCTCCTCAATGATGACATGACAGCTCTTGTCTCTGATTTTGGGGTTGCAAGGCTGCTTATGAGTGCTGGAGTTGGGGCTACCGATAACATGGGCAACTCTAGTGCAAATTTGCTTTTTGGATCTATTGGATACATTGCACCAGGTAATCTGTGTATCTTGCAAAATTAAGCGCAAGAAGCAACATTAAACCAAGCTCAGTTAAATTTGAAAATGGACTTTCACCGTTTTACTAACAGGAGCCAAGCAATTTAACTAGTCTAGATCAGTCAAAAGTTAACACTAATAAAATGTGTTACATAATGTTTTGGTGACTGTATTATCTCATACATATACTAGACAGATGACACTCTTGTTTGCCATGCATTTTGCTGCAATATTTTCCACTAGTTCAAATAATAAGTCATCAGTGCTCTTCCATAATTTCTGATGCAGAATATGGGTTTGGATCCAGTTCATCTATCAAAGGAGATGTCTATAGCTTTGGCATTCTAGTTCTTGAGATGGTGACTAGAAGAAGACCAATAGATGACATGTTTGTTGGTGGGTTAAGTCTGCACAAATGGGTAAAGTTTTATTTTCATGGAAGGTTAGAAAAAGTGGTAGATCCTGCTTTGGTGACAGCCTCAAGAGATCAATCCCAAGATGTTAGAAAAATGTGGGAAGTTGCTATTTCAGAGTTAATCGAGTTGGGACTTCTCTGCACACAAGAGTCTCCTTCGACAAGACCAACCATGCTTGATGCAGCAGATGACTTAGATCGTCTCAAGAGATACCTTAATGGAGACACAGCAGGAACTTTTGCCTCGTCTCTAGGAATTTCATCTTCCACAATAGGTGGTGACTGCTGA