Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25239 LG6 15500751 15503342 PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 15500761 5_prime_UTR_variant
G/C 15500976 5_prime_UTR_premature_start_codon_gain_variant
A/C 15500979 5_prime_UTR_variant
C/G 15501016 5_prime_UTR_variant
C/A 15501022 5_prime_UTR_variant
T/A 15501120 5_prime_UTR_variant
C/T 15501175 5_prime_UTR_variant
T/A 15501184 5_prime_UTR_variant
G/A 15501190 5_prime_UTR_variant
C/A 15501204 5_prime_UTR_variant
C/T 15501208 5_prime_UTR_premature_start_codon_gain_variant
C/T,* 15501231 5_prime_UTR_premature_start_codon_gain_variant
C/T 15501259 5_prime_UTR_variant
G/C 15501291 5_prime_UTR_variant
A/T 15501295 5_prime_UTR_variant
A/C 15501300 5_prime_UTR_variant
T/G 15501301 5_prime_UTR_variant
C/T 15501319 5_prime_UTR_variant
C/T 15501320 5_prime_UTR_premature_start_codon_gain_variant
G/A 15501325 5_prime_UTR_variant
C/T 15501326 5_prime_UTR_variant
T/A 15501336 5_prime_UTR_variant
A/G 15501352 5_prime_UTR_variant
C/T 15501364 5_prime_UTR_premature_start_codon_gain_variant
G/A 15501377 missense_variant p.Gly4Arg
G/A 15501378 missense_variant p.Gly4Glu
C/T 15501382 synonymous_variant p.Ser5Ser
G/A 15501393 missense_variant p.Gly9Asp
C/T 15501410 synonymous_variant p.Leu15Leu
G/C 15501427 missense_variant p.Glu20Asp
C/T 15501440 synonymous_variant p.Leu25Leu
C/T 15501446 stop_gained p.Gln27*
A/T 15501471 missense_variant p.His35Leu
G/A 15501473 missense_variant p.Gly36Arg
A/T 15501478 missense_variant p.Arg37Ser
C/T 15501499 synonymous_variant p.Ser44Ser
C/A 15501517 synonymous_variant p.Ile50Ile
G/T,A 15501524 stop_gained p.Glu53*
G/A 15501526 synonymous_variant p.Glu53Glu
A/G 15501538 synonymous_variant p.Lys57Lys
G/A 15501543 missense_variant p.Arg59Lys
A/G 15501555 missense_variant p.Gln63Arg
G/C 15501607 synonymous_variant p.Val80Val
G/T 15501697 missense_variant p.Lys110Asn
T/C 15501791 synonymous_variant p.Leu142Leu
C/T 15501797 missense_variant p.Pro144Ser
G/T 15501800 stop_gained p.Glu145*
T/A 15501839 missense_variant p.Ser158Thr
G/A 15501857 missense_variant p.Ala164Thr
G/A 15501862 synonymous_variant p.Leu165Leu
C/T 15501872 missense_variant p.Arg169Cys
C/A 15501900 missense_variant p.Pro178Gln
C/T 15501912 missense_variant p.Pro182Leu
G/T 15501914 missense_variant p.Ala183Ser
C/T 15501919 synonymous_variant p.Tyr184Tyr
G/A 15501925 synonymous_variant p.Ala186Ala
G/A 15501928 synonymous_variant p.Pro187Pro
T/C 15501955 synonymous_variant p.Asp196Asp
T/C 15502036 synonymous_variant p.Asn223Asn
C/T 15502072 synonymous_variant p.Asp235Asp
T/G 15502111 synonymous_variant p.Arg248Arg
C/A 15502205 missense_variant p.Pro280Thr
C/T 15502230 missense_variant p.Thr288Met
C/T 15502233 missense_variant p.Ala289Val
C/T 15502234 synonymous_variant p.Ala289Ala
G/T 15502393 synonymous_variant p.Ser342Ser
C/T 15502394 synonymous_variant p.Leu343Leu
C/T 15502402 synonymous_variant p.His345His
G/A 15502404 missense_variant p.Gly346Glu
C/T 15502408 synonymous_variant p.Phe347Phe
C/T 15502412 synonymous_variant p.Leu349Leu
C/A 15502421 missense_variant p.Leu352Met
C/T 15502426 synonymous_variant p.Phe353Phe
C/T 15502443 missense_variant p.Ser359Leu
C/T 15502445 missense_variant p.Pro360Ser
G/A 15502471 synonymous_variant p.Ser368Ser
G/A 15502474 synonymous_variant p.Ala369Ala
G/A 15502477 synonymous_variant p.Ser370Ser
G/A 15502481 missense_variant p.Val372Met
A/T 15502497 missense_variant p.Glu377Val
G/T 15502564 synonymous_variant p.Gly399Gly
A/T 15502714 missense_variant p.Lys449Asn
C/G,* 15503029 3_prime_UTR_variant
C/G 15503126 3_prime_UTR_variant
C/G 15503148 3_prime_UTR_variant
G/T 15503166 3_prime_UTR_variant
A/T 15503171 3_prime_UTR_variant
C/T 15503193 3_prime_UTR_variant
C/T 15503248 3_prime_UTR_variant
T/C 15503298 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25239.1
MDRGSNGTGGSRNILFNKYEIGKLLGQGNFAKVYHGRNLSTNDSVAIKVIKKEKLQKDRLVKQIKREVSVMRLVRHPHIVELREVMANKAKIFLVVDYVKGGELFAKVAKGKMKEEIARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLSGYLPFQGENVMRIYSKSFKADYAFPEWISPGARRLISNLLVVDPEKRYSMSDIMKDPWFQVGFMRPIAFSMKETAVEINIDFNGDESGGSGNVSGSEDGNGSSNNHSGELVGAKPARPSYNAFEIISSLSHGFDLSNLFETRKRSPSMFISKHSASSVMAKLEAVAKKLNFRVTGKKQFTVRMQGATEGRKGKLGMTVEVFEVAPEVAVVEFSKSAGDTLEYIKLCEEEVRPSLKDIVWSWQGDSNSRQ*


CDS Sequence:
>Vu_25239.1
ATGGATCGCGGATCCAATGGCACGGGTGGCAGCAGGAACATCCTGTTCAACAAGTACGAGATAGGGAAGCTGCTGGGGCAGGGGAACTTCGCCAAAGTGTACCACGGGAGAAACCTCAGCACAAACGACAGCGTGGCCATCAAGGTCATCAAAAAAGAGAAGCTTCAGAAAGATAGGCTGGTGAAACAGATAAAGCGCGAGGTCTCCGTCATGCGCTTGGTGCGTCACCCCCACATCGTGGAACTCAGAGAGGTTATGGCCAACAAAGCCAAGATCTTCTTGGTCGTCGATTACGTCAAGGGAGGAGAACTCTTCGCCAAGGTGGCCAAGGGAAAGATGAAGGAAGAAATCGCCCGGAAGTACTTTCAACAGCTGATCAGCGCCGTCGACTTCTGCCACAGTCGTGGCGTCACCCACCGTGATTTGAAGCCGGAGAATCTGCTCCTCGACGAGAACGAAGACCTGAAAGTGTCAGACTTCGGCTTGTCTGCGCTGCCTGACCAGCGCAGATCTGACGGGATGCTCGTGACGCCGTGCGGCACGCCGGCCTACGTGGCGCCGGAGGTTCTGAAGAAGAAGGGCTACGATGGGTCGAAGGCAGATATATGGTCGTGTGGGGTGATCCTCTTCGCGCTTCTTTCTGGGTATTTGCCCTTTCAGGGTGAGAATGTGATGAGGATTTACAGCAAGTCTTTCAAAGCCGACTATGCATTCCCGGAATGGATTTCGCCCGGGGCGAGACGTTTGATCTCTAATTTACTGGTCGTGGACCCAGAAAAGAGGTATTCCATGTCTGACATCATGAAGGATCCTTGGTTCCAAGTTGGGTTCATGCGCCCCATTGCGTTTTCCATGAAGGAGACGGCCGTGGAGATTAACATCGACTTCAACGGGGACGAATCCGGTGGCAGTGGAAACGTTAGCGGCAGCGAAGACGGTAACGGCAGCAGCAACAACCATTCTGGGGAACTGGTCGGGGCCAAGCCGGCTCGTCCGTCTTACAATGCTTTCGAGATAATATCCTCGCTGTCGCACGGGTTCGATCTGAGTAATCTGTTCGAGACGAGGAAGCGGTCGCCGTCGATGTTCATATCGAAGCACTCGGCGTCGTCGGTGATGGCGAAGCTGGAGGCGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGCAGTTCACGGTGAGAATGCAGGGGGCGACGGAAGGGAGGAAAGGGAAGCTGGGGATGACAGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCGAAGTCTGCCGGAGACACGCTTGAATACATAAAGCTATGCGAGGAAGAAGTGAGGCCTTCGCTGAAAGACATCGTGTGGAGTTGGCAAGGGGACAGCAATTCCCGCCAGTGA


Promoter Sequence:
>Vu_25239::LG6:15498751-15500751(+)
TTTTATACCATACGAGATCATATTAATTTTTATTTTTTTATTAAGGGTATTACGAGAATTTTAAAAAATACGGGGTTGCAGAAAGTAATAACCCAAATCAAATTTGCCAGATATTTTAGGTCCAGAATATTTTTTTCCCACTAGTTAGATATTGCTTGTGTTTTTTGGGTATTTCTTCCTGCCCCTTCGTAATGTCTTACTTCACCTGCTACATTTCAATTTTATCTCCTTTCATTTTCAATTTTGAAATAATCAATCCGAAAATGTTTTGAAATATACAATCTGATATAAAATTTATATTTTTATTATACAATTCAAAATGTAAATAAAAAATGCATATAAAAGCTATAATACAAATTTTATTCTGAATGGATTTCACATTTTAGACTTTTCATTTACAATCCAAAACATAAAATATCATATATTTTGCATAATTCAAAATATATTTATTAATTGTAGAATTCAAAATATACAAATTAAATGTATTTTCAAATCATCAAATCCGAAAATTCACGATATAATATCTGACCACGTAATTTATAATATATTTTTGATTACATAATTTAAATATATTTTTTAATTTGAAAATTTATTTTACACTATTACAAAACAGAGAAAACGAGATGTATTGAAGCATTTTGCAATTAATTTGCTTAGACTATAAATGTAACGTAAACATGAAAATCTTGAGTAGTAGAAGAATGTCACTAACTTACGTTTTTGTTTACTTTGCGTTGAGCTAATAAAGTTTAAGTAATTAGGCGGGAGAAGTAACTAGAGTTTTAGAAGGATCAAATTAATATTAACGACAAACTTTAAACACTTAATGTGATTTTAATAAGTATTTTCAAAAATTAAATTAAAATTAAAAATAATTTATATTTAATGTGCTTAGGAATTAGTATTTGAAAAATGAAGAAATAATATTTTCACATGACTCTAATAATACCCCTAAATTAGTTAGTTGTATATATAATTTTTGGCAATATAAATAAATAATTTTTTTAATAAAATATTCGGCCCAAATAAATCTGTACGATCGATAGAAACTTGAAATGGGTGATAAATAACAATTTCGTCACGTTTTAACAAAATATCTACATAAATTATTTTTTAAGTATCTATTTGCGTGCGTTATACGACGTCTTCCGCGGCATTAAAATTTTATATTTTCCGAAATTATTAACAAAGTTAAATTATCAATTTGATCATATAAAAACAAAATCATGATTAATACAGACGTAGCAATTTCTAGACCACGATGTATTGTTAAATAAAAAATAGTTTAATGGCCACAGAAAAAAGTACTTTAAAAAAATAATAAATTTGGCGAAAATCTTCAGCAGCCGTAATCAAGATTTCTGTCAGTACGAGTTCTCTTTTTTTAATTTCTTATCATAACATTAAATCAGATTTCATATCGATTTTCCATATAAAAGTATATGGTAAGAAATATGAATATATTATTATTCAGCGTTAAATAAGAATTAGTTTGAAAAATATAATAAACAAGAACAGAAAGAAACGGTGTGTGGAGAAATCCGTTTACTGAAATCCCATGGATTTGCGAAACGGGTCGGGTTATATTGCATAAAGATAAGCGGGTTGGTCTCGTGTTTTGCGTGGTTGACGTTGGACAGCCGTTCAAAGCACGCGTATCCAATAAAATAAAGTTGCAATTTGGTAGGTTTAGGTTTTGATAATTTGGTCAAAACCTTACAGAAACCACGAGCAGTACCTAGCTAGCTGTATTCGACTCACATCCACGTCACCACTCATCATTCACCTCCAATCATCAACCTTATCTTTCTCTATTTTTTCCTTTTTCTATTTTTTATTTATTCTTGCATTTATTATATTCATTAATATCAATTTCAACAGATCTTCTTTATGGTAAATTTTTGTTTATAGCATTTTCAAAATTACAAAGCAATTATTTATCACATGGGTATTAAAAATATATTTATCTAAACATTTTAGTGTGTAATTAGACTTGGTGA


Gene Sequence:
>Vu_25239(+)
AAGGAAAAAAAAGAATTAATTTAGAAGAAAGGAAGTTTTGGTACCCTCATAGGTGTAGTTGTTCCATTTATCTTAATTTAGGTTTTTTCCAGATATTTTGTGGCGTTATGTTGTGTTTGGATACGATCTCTTCCAACCGCTCCTCATAAAACGGCATTCTCCTCTTCTCGCCCAACACCACAGAAACCTGAAACCTGAAACAAATCACTGTCTCTCTGGTTCTGCGTGATAGCCGCGTTCTCCGTCTTCTTCCACCGTCCTCCACCACTTCCGATACTTTATTTATTCTGTTTTACAACCCACTTTCAGTTCGGGCTTGTTCCCCTAATCGGGTCTTGGAACTCAAACACAAATCTAAGCACATCATCCTCACCCTTTTTCCTCTCCCTCCCCCGCATGCAACCATGAAGATTTTCAACCCATCCAAATCTTTTCTCCAGAACGTGGTGTGTCCATTCGACACCCTCTTCATTATAAGGACGAAGCCCTTCGATCTGGGTCTCTCCCACCTCCACCAATTCCAATTCAAAGCCTACAATTGAAAACCCTATAGTAGAAACCAAAACCACCGACAGCGTTAGGTAATACTGGTTCGGTCAACAATCCCCGCCGCCGAGATGGATCGCGGATCCAATGGCACGGGTGGCAGCAGGAACATCCTGTTCAACAAGTACGAGATAGGGAAGCTGCTGGGGCAGGGGAACTTCGCCAAAGTGTACCACGGGAGAAACCTCAGCACAAACGACAGCGTGGCCATCAAGGTCATCAAAAAAGAGAAGCTTCAGAAAGATAGGCTGGTGAAACAGATAAAGCGCGAGGTCTCCGTCATGCGCTTGGTGCGTCACCCCCACATCGTGGAACTCAGAGAGGTTATGGCCAACAAAGCCAAGATCTTCTTGGTCGTCGATTACGTCAAGGGAGGAGAACTCTTCGCCAAGGTGGCCAAGGGAAAGATGAAGGAAGAAATCGCCCGGAAGTACTTTCAACAGCTGATCAGCGCCGTCGACTTCTGCCACAGTCGTGGCGTCACCCACCGTGATTTGAAGCCGGAGAATCTGCTCCTCGACGAGAACGAAGACCTGAAAGTGTCAGACTTCGGCTTGTCTGCGCTGCCTGACCAGCGCAGATCTGACGGGATGCTCGTGACGCCGTGCGGCACGCCGGCCTACGTGGCGCCGGAGGTTCTGAAGAAGAAGGGCTACGATGGGTCGAAGGCAGATATATGGTCGTGTGGGGTGATCCTCTTCGCGCTTCTTTCTGGGTATTTGCCCTTTCAGGGTGAGAATGTGATGAGGATTTACAGCAAGTCTTTCAAAGCCGACTATGCATTCCCGGAATGGATTTCGCCCGGGGCGAGACGTTTGATCTCTAATTTACTGGTCGTGGACCCAGAAAAGAGGTATTCCATGTCTGACATCATGAAGGATCCTTGGTTCCAAGTTGGGTTCATGCGCCCCATTGCGTTTTCCATGAAGGAGACGGCCGTGGAGATTAACATCGACTTCAACGGGGACGAATCCGGTGGCAGTGGAAACGTTAGCGGCAGCGAAGACGGTAACGGCAGCAGCAACAACCATTCTGGGGAACTGGTCGGGGCCAAGCCGGCTCGTCCGTCTTACAATGCTTTCGAGATAATATCCTCGCTGTCGCACGGGTTCGATCTGAGTAATCTGTTCGAGACGAGGAAGCGGTCGCCGTCGATGTTCATATCGAAGCACTCGGCGTCGTCGGTGATGGCGAAGCTGGAGGCGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGCAGTTCACGGTGAGAATGCAGGGGGCGACGGAAGGGAGGAAAGGGAAGCTGGGGATGACAGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCGAAGTCTGCCGGAGACACGCTTGAATACATAAAGCTATGCGAGGAAGAAGTGAGGCCTTCGCTGAAAGACATCGTGTGGAGTTGGCAAGGGGACAGCAATTCCCGCCAGTGAATATTCCAAATATTATTATTATTATTATTATTAAAATTATGTTTGCGCATTCCCTTGGAAAGACGAGAACCAAAATAGCTAGGTAGTGAAATTATCTTAGTTGTTTTCGTTATGAGTCCCTTTGGGTTTAGATTTTATGTATATGCACATACTGCATATGTCTCCTTGTTTATCACACCACCACCCGGTTATTACAACAATTTCTGCAACTCAACCATTTCTGCATATCAACTTACTATGAATTTTGCATAAGTTCCTTATATAAACTTCATACACTTGCTGGAAAAAACAATCTTAAGAGTTATATAAAAGAGTCTAGTATAAATCTCCCACTACATTCCTCAGAATTCAAAACATCTTTTTTTCCAAGGAAAAGGAAAATGAATCTCTGTGTTGAGCTGAGAGGGAAGCAAAAAACCAATGATGTGGGGTACGGTGAGAGGTTGGTATTGGAAGGTAGCAACAAAAGGTGACTGGGATCATACGCACCCTTTGGAATGCATGCTGCTGCTGTATCCTTCTCTCCAATATTTAATAATATTTTTTGATAACATTACGCAAGTCATTCTATGATTGATTTATT