Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25111 LG6 14544138 14547311 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Pathway   B 09101 Carbohydrate metabolism   C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ko00520]
SNP Position Effect Amino acid change
C/T 14544389 missense_variant p.Glu603Lys
A/G 14544390 synonymous_variant p.Tyr602Tyr
G/A 14544600 missense_variant p.Ser564Leu
C/A 14544608 stop_lost p.Ter561Tyrext*?
T/C 14544647 synonymous_variant p.Pro548Pro
A/C 14544660 missense_variant p.Met544Arg
G/C 14545062 upstream_gene_variant
T/G 14545141 upstream_gene_variant
A/G 14545144 upstream_gene_variant
A/T 14545200 upstream_gene_variant
C/G 14545222 upstream_gene_variant
T/C 14545235 upstream_gene_variant
A/G 14545238 upstream_gene_variant
G/A 14545325 upstream_gene_variant
T/A 14545334 upstream_gene_variant
T/C 14545483 upstream_gene_variant
C/T 14545489 upstream_gene_variant
T/A,* 14545528 upstream_gene_variant
T/C 14545548 splice_region_variant&intron_variant
A/T 14545563 synonymous_variant p.Thr451Thr
C/T 14545883 upstream_gene_variant
T/C 14545938 upstream_gene_variant
G/C 14545978 upstream_gene_variant
G/T 14545984 upstream_gene_variant
G/A 14546000 upstream_gene_variant
T/A 14546029 upstream_gene_variant
G/A 14546030 upstream_gene_variant
T/C 14546037 upstream_gene_variant
T/C 14546063 upstream_gene_variant
T/G 14546119 missense_variant p.Lys398Thr
A/G 14546242 missense_variant p.Ile357Thr
T/C 14546321 missense_variant p.Ile331Val
T/G 14546335 missense_variant p.Asn326Thr
A/G 14546373 synonymous_variant p.Ser313Ser
C/G 14546389 missense_variant p.Arg308Pro
G/A 14546406 synonymous_variant p.Cys302Cys
C/A 14546421 synonymous_variant p.Thr297Thr
T/A 14546476 missense_variant p.Glu279Val
A/G 14546489 missense_variant p.Trp275Arg
A/G 14546497 missense_variant p.Val272Ala
T/C 14546554 missense_variant p.Asp253Gly
C/G 14546575 missense_variant p.Gly246Ala
A/G 14546721 synonymous_variant p.Tyr197Tyr
C/A 14546726 missense_variant p.Asp196Tyr
A/G 14546751 synonymous_variant p.Asp187Asp
A/G 14546878 missense_variant p.Phe145Ser
C/T 14546882 missense_variant p.Asp144Asn
C/A 14546933 missense_variant p.Gly127Cys
A/T 14546951 missense_variant p.Leu121Met
T/A 14546988 synonymous_variant p.Ile108Ile
A/C 14547015 missense_variant p.Ile99Met
G/A 14547023 missense_variant p.Leu97Phe
G/C 14547145 missense_variant p.Thr56Ser
T/G 14547146 missense_variant p.Thr56Pro
G/T 14547147 synonymous_variant p.Ser55Ser
A/G 14547153 synonymous_variant p.Phe53Phe
C/A 14547219 missense_variant p.Lys31Asn
G/T 14547269 missense_variant p.Leu15Ile
C/T 14547299 missense_variant p.Val5Met
T/C 14547301 missense_variant p.Asn4Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25111.1
MRRNVLPSLLFFLCLLQPSEGEHIGIYWGQKANEGNLTETCATGKYSYVNIAFLSTFGNGQTPKLNLAGHCDASTNGCTEMGREIRNCQKQGIKVMLSIGGGTDDYSITSLEDAKNVSDYLWDNFLGGSSSSRPFGDVVLDGIDFDIQAGESSFLGNLSLQLISYSQTRKVYLSAAPQCPFPDARLDSVLATGVFDYVWIQFYNNPPCQYTDNNFDNLLKAWNLWSTSLKAGKMFLGLPADQTAAGSGYVPADVLVSKILPEIKKSSNYGGVMLWSRYEDETSGYSSYIQNFHINQTVDSLCTQQSLRACRSSEGGFVESFGNMSNVGIQIYAGSNGTQCCEIICRNNCSCQAYAPINRKNNTGCQIWLKGTEFVRASADKSLPIYVSVALLPEDKGKSRFPTTTVNRWYIWLIVGVAAAFAIPVIFSSWRALWRNYKAKVERKKMQEKLLLDIGDSTRKNLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDHEMNPKISDFGMARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLETLSGKKNNSRYDSDRPLNLIGYAWELWNEGRALGLIDPDSYELCPQNAVLRCIHIGLLCVQDQATDRPTMEDIVSFLSNDTMQLPQPKQPAFFINVVVEDSVLPYSRQELHSSNDLTLSSTHGR*


CDS Sequence:
>Vu_25111.1
ATGAGGAGAAATGTGCTTCCCTCTCTATTGTTCTTCCTCTGTCTACTTCAGCCCTCTGAAGGTGAACACATTGGCATTTACTGGGGTCAAAAGGCCAATGAGGGAAACCTGACAGAAACGTGTGCAACAGGAAAATACTCCTACGTCAACATAGCCTTTCTTTCCACCTTTGGGAATGGCCAAACCCCAAAACTGAACCTGGCTGGTCATTGTGACGCATCTACTAATGGGTGCACTGAGATGGGAAGAGAAATTAGAAATTGTCAAAAGCAAGGGATCAAGGTGATGCTTTCTATTGGAGGAGGAACTGATGATTACTCTATAACTTCCCTTGAGGATGCCAAGAATGTTTCCGACTACTTGTGGGACAATTTCCTGGGTGGTTCATCCTCATCACGCCCATTTGGGGATGTTGTCTTAGATGGCATTGACTTTGACATACAGGCAGGTGAATCATCATTCCTGGGAAACCTTTCTCTTCAACTCATTTCATATTCACAGACACGTAAAGTGTACCTGTCAGCAGCTCCTCAGTGTCCATTTCCTGATGCTAGGCTGGATTCAGTCCTTGCTACTGGCGTTTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGCCAATATACCGACAACAATTTCGACAACCTCCTTAAAGCATGGAACCTTTGGTCCACCTCATTGAAGGCAGGGAAAATGTTTCTGGGGTTACCAGCAGATCAAACTGCAGCTGGAAGCGGTTATGTTCCGGCTGATGTATTAGTTTCTAAGATCTTGCCTGAGATTAAAAAGTCATCAAATTATGGAGGTGTTATGTTGTGGTCAAGGTACGAGGATGAAACGAGTGGATACAGCTCCTACATTCAAAATTTTCACATAAATCAGACGGTAGATTCTCTATGCACACAGCAAAGCCTTCGTGCATGCAGGAGCTCTGAAGGTGGTTTTGTGGAAAGTTTTGGTAACATGTCCAACGTTGGCATACAAATTTATGCCGGCAGCAATGGTACGCAGTGCTGTGAGATCATATGTAGGAACAATTGTTCGTGTCAAGCATATGCCCCAATAAACCGCAAAAACAATACCGGATGCCAGATATGGCTCAAAGGAACAGAATTCGTTAGAGCTTCTGCAGACAAATCACTGCCTATCTATGTTTCTGTTGCACTGCTCCCAGAAGACAAAGGTAAGTCCAGATTCCCTACCACCACAGTAAACCGGTGGTACATATGGCTCATCGTTGGGGTGGCAGCAGCATTTGCAATACCTGTAATTTTCTCTTCATGGCGTGCCTTGTGGAGAAACTACAAAGCTAAAGTGGAGAGAAAGAAGATGCAGGAGAAGTTATTACTTGATATTGGAGATTCAACTAGAAAGAATTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTGCACAAGTACTCGAGACTAAAGGTGATACATCGAGATCTGAAAGCAGGTAATATATTACTTGATCACGAGATGAATCCTAAGATATCTGACTTTGGCATGGCTCGAATATTCGGTGTAAGAGCATCAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGATACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCCATCAAAATAGATGTATTCAGCTTTGGTGTGCTGCTGCTAGAAACACTCAGTGGCAAGAAAAATAACAGTCGTTATGATTCGGATCGTCCACTCAACCTCATAGGATACGCGTGGGAGCTCTGGAATGAAGGCAGAGCTCTGGGGTTGATAGACCCAGATTCGTATGAACTATGTCCTCAGAATGCAGTTTTGAGATGTATTCATATCGGCCTGCTGTGTGTACAAGATCAAGCAACAGATAGACCAACCATGGAAGACATTGTTTCATTTCTATCAAATGATACAATGCAACTTCCCCAACCAAAGCAGCCAGCGTTCTTCATCAATGTGGTTGTGGAAGACTCTGTGCTTCCTTACAGCAGACAAGAACTTCATTCCTCAAATGACTTAACACTTTCTAGCACACATGGAAGATAA


Promoter Sequence:
>Vu_25111::LG6:14547311-14549311(-)
GAACTAAACTGTTTTTTGATTTATCAACTATACTAAATTGTACTAAACTACAATATAAACTAAATTGAACTGCTAACTATACTAATTTTAAACTGAATTATACTAATTTTAAACTCAATTGTAGTAGTTTTTAAACTGAATTGTACTAGTTTTTAAACTGAATAGTATAATAATACATATTCTTTTTAAATGAATTTTTTTTAATATTTATTTTATTTTATTCATAAGTGTCTTACAAATTAACTTTTTAATTATTTGATATTATTATTTTCTATTTTATTTATATTTCTTTTATTATTATATGTGTATGAAACTTATTTTATTATTTATTTTATTTTATTTTATTTTATTTTTTATTTTTTATTTATATTTATTTTGTCATGAATATTATTTTACTTTTATATTTATTTTTTTAATTTTTTATTTATATTTTTTTGTTTTATATGTGTATATAATTTATTTTATCTTTTTATCTACTTATTTTATTTTAAAATAATTTTTTATTTATATTTATTTTATTCCCTCGTAAAATTGTTTTTTTAATCAATTATTTATTATTTATATTTTATTACGTAAAAATTAAACTAATATTTATTAATTATTATAATATAATAAAAGATGATACTAGAAAAATTACTCTTAATAAACATTTGTTAATTTTTTTGTCATTTGATATTTCTATAATATTAATTATTTTTGCTACATTATTATTTTTTTATGATATTTCATTATATATTCATTTAATAAAATTTAACGTTAAAAAATATATTTTAGTTTTAGTATGTAAAATACTATCATTTAAAAATATTAATATTGATATTTATTTTAAAGTAAGTTAATTTTTAAAATAAATAGTTATTTTAGTGTGTGCGCTTACACACATTTTAATATCATTAAAAGTTTTTTTTAACATATTTTTACATATATTAATAATATGTTAAAGAATATAATATATTTAAAGTATTATTTTTTTATATAGTCTTTTTTTATGATTTATATTACTTAATCATTTAATAAAATTAAATTTAAAAAAATATATTTTACTTTTATTACTTAAAATAATATTATTTAAAAAGTAATACATGTTTATTGATGAAAAAATATAAAAATTTGTGATAAAAATATTTTGTCTTAAAAAAATTCATTATTAATTTTTTATTTGAACGGTTTCTTTTATTAATATTTTATTATTAAATAACATTTTCTTAACAAGACGGAACAATTGAACGAAAACTAGAGAAGAGAAAAGAGTAGATACACAGTTAACTGAATCGAAACTGTTATATGTTTAGTTTTTAAAAACTAAACCATAAAATAGTATACTGAACTTTTAGTAAAAGTGGATCAGTTTTTTTAAGTATAATATAGTATAGTTAACTATAGTACAGTACAGATCAATTATTTTTTGTCCAGCCCTAGTTTTTGAGGTTTAATGATAAGAATGCACTCTTTATATCATCAAATGGCTATAGTAAAAATCTTGGTGCAAAAAAAAATTATTATGATTAGTTTTTAAGCAAACCAAGTTTGATGATGAAAGTTGACTAAGTTGGTGCTTGGTGCTAGATTTGGAAAATATTCAAATTCTTGTTCACTCAACATGCATGGATGTTTTTAGTTTCGGAGTATTGATGCTTGAGATTATCAGTGGTAAAAAGAATTCTAATTCGGACCAGACCACCCGATCAATCTCATAGGACATGTAAGTTCTATTTTGGTGGACGCGCTTTTGCACCGTCTATGCAAACACATTACATTGTTCTGAGCTCTACAGTATGTAGAGAGATCGTTAGTCAAAGTCAATGGTTATCGTGGTAAAGAAAGTAGAAAAGAGATAGAAAAGGGTTGGTAGACGTGTATGAATTTGCAAGCGTTAGAACAAGAACAAAAACGCGTGAAGGGTAAAGTTGGAGGATTGCAGCCATAGATAATGCATATTAGGTTGGATATCGGTCGATTGATACCAAGAAAAAAAACAGTGATAAAAGAAAGAGAGCAAG


Gene Sequence:
>Vu_25111(-)
ATGAGGAGAAATGTGCTTCCCTCTCTATTGTTCTTCCTCTGTCTACTTCAGCCCTCTGAAGGTGAACACATTGGCATTTACTGGGGTCAAAAGGCCAATGAGGGAAACCTGACAGAAACGTGTGCAACAGGAAAATACTCCTACGTCAACATAGCCTTTCTTTCCACCTTTGGGAATGGCCAAACCCCAAAACTGAACCTGGCTGGTCATTGTGACGCATCTACTAATGGGTGCACTGAGATGGGAAGAGAAATTAGAAATTGTCAAAAGCAAGGGATCAAGGTGATGCTTTCTATTGGAGGAGGAACTGATGATTACTCTATAACTTCCCTTGAGGATGCCAAGAATGTTTCCGACTACTTGTGGGACAATTTCCTGGGTGGTTCATCCTCATCACGCCCATTTGGGGATGTTGTCTTAGATGGCATTGACTTTGACATACAGGCAGGTGAATCATCATTCCTGGGAAACCTTTCTCTTCAACTCATTTCATATTCACAGACACGTAAAGTGTACCTGTCAGCAGCTCCTCAGTGTCCATTTCCTGATGCTAGGCTGGATTCAGTCCTTGCTACTGGCGTTTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGCCAATATACCGACAACAATTTCGACAACCTCCTTAAAGCATGGAACCTTTGGTCCACCTCATTGAAGGCAGGGAAAATGTTTCTGGGGTTACCAGCAGATCAAACTGCAGCTGGAAGCGGTTATGTTCCGGCTGATGTATTAGTTTCTAAGATCTTGCCTGAGATTAAAAAGTCATCAAATTATGGAGGTGTTATGTTGTGGTCAAGGTACGAGGATGAAACGAGTGGATACAGCTCCTACATTCAAAATTTTCACATAAATCAGACGGTAGATTCTCTATGCACACAGCAAAGCCTTCGTGCATGCAGGAGCTCTGAAGGTGGTTTTGTGGAAAGTTTTGGTAACATGTCCAACGTTGGCATACAAATTTATGCCGGCAGCAATGGTACGCAGTGCTGTGAGATCATATGTAGGAACAATTGTTCGTGTCAAGCATATGCCCCAATAAACCGCAAAAACAATACCGGATGCCAGATATGGCTCAAAGGAACAGAATTCGTTAGAGCTTCTGCAGACAAATCACTGCCTATCTATGTTTCTGTTGCACTGCTCCCAGAAGACAAAGGTAAGTCCAGATTCCCTACCACCACAGGTGACAATGTCCTTTGCTTCTTGTCCTAGAACAAGGAAATAAAACATTTAATGGAATTACAATGACAAGAGAATGTTTAGAGTAGTTTTCCCGTACAATACAGAAAAATGACGTTTTCATAAGCTAAAATTACTAGTCATTGGGTCCTGGTAAGTTGATTATCATTCTTGATTCTTTGAAAGTATTTTCATAAGGTACCTTGCATAGGATATGGAGTAAGAATACATGAGTAATAAACCCTCTAATTACCATCTAAACAATTTTCAGCCACCTTTTCAGAGTAGTAAATTATCCATCTGTGAGTTGCAGTAAACCGGTGGTACATATGGCTCATCGTTGGGGTGGCAGCAGCATTTGCAATACCTGTAATTTTCTCTTCATGGCGTGCCTTGTGGAGAAACTACAAAGCTAAAGGTAACTGTCATAATTTGGATATGGTTTAGTGAGTTTAAGTCTGCAAGACCTTTTCATAACTTACATGTTCATGTCTCACCACCAGTGGAGAGAAAGAAGATGCAGGAGAAGTTATTACTTGATATTGGAGGTAATTCTAGAAAAAGTAAGAACAAGGGAAAGACAAGCAATGGGGTTGAAATATTCACCTTTGAAACCATTGTTGCTGCAACAGAGAATTTCTCAGCGGCCAATAAGCTAGGAGAGGGTGGATTTGGTCCTGTTTATAAGGTACTTTGAAACCATAAATCTGCATAACAATTAATTAACTTTCTTGCTTAAATTTGAAACTGTCTGGATAAGAACTGATACAATGACCTTCAGGGAACACTGCGTGATCAGCAAGAAGTAGCAATCAAGCGACTTTCTAAAAGTTCAGGACAAGGGGTGATAGAATTTAAGAATGAAGCCAAACTTATGGCCAAACTCCAACACACTCATCTTGTAAAGCTTCTAGGGTTCTGCATCCAGAGAGATGAAAGAATATTGGTTTATGAATACATGCCTAACAAGAGCTTAGATTTCTACCTATTTGGTAAGCTTTCTTTTGTCTCTTAACGAAGGTATTGCCAAGGTAAGACTGTGCCAGATGTTAGCATGAAGTATCATTTTAACAGCCATGCTGACTTCATAACAGATTCAACTAGAAAGAATTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTGCACAAGTACTCGAGACTAAAGGTGATACATCGAGATCTGAAAGCAGGTAATATATTACTTGATCACGAGATGAATCCTAAGATATCTGACTTTGGCATGGCTCGAATATTCGGTGTAAGAGCATCAGAAGAAAACACAAACAGAGTTGTTGGTACATAGTAAGTTTATAACTGGGTCATGCATTTTCAAAACTCTTCCCTTTCATCCATCCTTACGCAAGATTCGATCTTTTCAGTGGATACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCCATCAAAATAGATGTATTCAGCTTTGGTGTGCTGCTGCTAGAAACACTCAGTGGCAAGAAAAATAACAGTCGTTATGATTCGGATCGTCCACTCAACCTCATAGGATACGTAAGTTTCTCATTATCAAATGATTAGTTCATTAAATTTATGCTTATAAAAGGTTAAAAGTTTTATTTGGATGCTGGGATGCTTGTATTGTAGGCGTGGGAGCTCTGGAATGAAGGCAGAGCTCTGGGGTTGATAGACCCAGATTCGTATGAACTATGTCCTCAGAATGCAGTTTTGAGATGTATTCATATCGGCCTGCTGTGTGTACAAGATCAAGCAACAGATAGACCAACCATGGAAGACATTGTTTCATTTCTATCAAATGATACAATGCAACTTCCCCAACCAAAGCAGCCAGCGTTCTTCATCAATGTGGTTGTGGAAGACTCTGTGCTTCCTTACAGCAGACAAGAACTTCATTCCTCAAATGACTTAACACTTTCTAGCACACATGGAAGATAA