Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25013 LG6 13664309 13665602 PREDICTED: transcription factor MYB26-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   anther dehiscence, anther dehiscence, anther dehiscence, plant-type secondary cell wall biogenesis, anther dehiscence
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 13664342 missense_variant p.Leu344Pro
G/C 13664343 missense_variant p.Leu344Val
T/C 13664399 missense_variant p.Lys325Arg
T/A 13664438 missense_variant p.Gln312Leu
G/C 13664789 missense_variant p.Pro195Arg
A/T 13665157 intron_variant
C/A 13665189 intron_variant
G/A 13665336 missense_variant p.Thr66Met
T/C 13665344 stop_lost p.Ter63Trpext*?
T/C 13665450 intron_variant
G/A 13665451 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25013.1
MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVVPSLATFSDIHGLANGSMESFFPLTDNTILNSHHHLDQLYLPIIPTPILQAFDHLNNDIKIDINNYHNNNNNNNPNFLHFQNPMPETVPPSNNIIPSLFELESTWSSLGCVPIHLNPNQQSQTITTKSDTTPHLILEKFINPSTWQNQAVEPTIDLVPKVCESIEDYVCSIPFSSSANSQHQHEDAVACYTPGICPQDQIAVPNQVEYIDAIIMSSLPSSTTTSSSVSLYQADK*


CDS Sequence:
>Vu_25013.1
ATGGGGCACCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGAGGACTCTGGTCACCTGAAGAAGATGAAAAACTCATCAACTACATCACAACCTATGGCCACGGTTGCTGGAGTTCCGTCCCAAAACTTGCAGGCCTGCAGAGGTGTGGAAAGAGCTGCAGATTGAGATGGATAAATTATCTAAGACCTGATTTGAAACGGGGAAGCTTTTCTCCTCAAGAAGCAGCACTCATTATAGAACTTCACAGTATCCTTGGCAACAGGTGGGCTCAGATAGCGAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAGCTGCTTTCTCATGATGTTGTTCCTTCTTTAGCCACATTTTCTGATATTCACGGTCTTGCCAATGGTTCCATGGAAAGTTTCTTCCCTTTAACTGACAACACTATCCTAAACTCCCATCATCACTTAGACCAGCTATACCTTCCCATCATCCCAACCCCAATCCTACAAGCCTTTGATCATCTCAACAATGATATCAAGATTGACATAAACAATTATCATAATAACAATAATAATAATAATCCCAATTTCCTACATTTTCAGAATCCAATGCCAGAAACAGTGCCACCATCCAACAACATTATTCCATCTTTGTTTGAATTAGAATCTACATGGTCCTCGTTGGGGTGTGTACCCATTCATCTTAATCCAAATCAACAAAGTCAAACAATCACCACCAAAAGCGATACCACCCCACACTTAATTCTTGAGAAATTCATCAATCCAAGTACATGGCAGAACCAGGCAGTGGAACCGACCATTGATCTTGTTCCAAAAGTGTGTGAGAGCATCGAGGATTATGTCTGCAGCATCCCATTTTCTTCTTCTGCCAATTCACAACATCAACACGAGGATGCTGTCGCCTGTTACACACCAGGTATTTGTCCACAAGATCAAATTGCAGTACCCAATCAAGTGGAGTACATTGATGCCATCATCATGTCATCGTTGCCATCCTCAACAACAACATCTTCATCAGTATCACTCTATCAAGCAGACAAATAG


Promoter Sequence:
>Vu_25013::LG6:13665602-13667602(-)
CATAAATAGTGACTCTTTTATAATATTGTGATAGATTCTTACTTAATTGGACTTAAGTTAAATCGGTTAAGTTTTAGAATGTTTTAATCTTTCATTATGTTAAACTTAAATTGTTTTAATCCAGTAATTTTATTTTAAGAAATAATTCTATAATACGATGTCGGTGTACATAAGTTAAAAATCATTGCAGGTTAATTGTGTTTTTTTTTTTTAAATTTCGTGTAGTATTTATACTTATTAGCTTTGATGGATTCATCATCACGATATAGGACCACTTAATTTGTACTGTATATGGATGTAAATTCTCTATTATATATTTTTCAAATAATTAGCTTATTTACTTTATTATATATATATGGTATTGTTATAAAATTTGTTATAAGATTTTAGTATATATATGATATGGAAGCTCGTATATTTGGCTGAAAAAGGAACACGTGATGATTAAGTAATCCAGCAAATAATTACTATCTTTGACCGCGTTTGGTGGCAATTTTGCAAAGTTCACACACACCACTCTTTCACTCCTTTGAGCAGTTCCCCCAAACATTTTCCTAAGAAACATAACTGTTTCTAAATGAACATATTCCTTTGTTACATAAACTAATAACAATGTTAAAATGTCAAACAGTTATCTCGTAATGCATGGATGGATATACATTATTAAAATATTTAGCAAATACATGAAAACAAAAGGCCAAACACCAACGTTTATATAATAGTAGAAATTTTGACATTATGTAAAACCAGCTCGAAAAACTTTTAGATGTGTGTGCCAGTTTGGTCTGATATATAGCCTGTTCGTGAAATTACACACATACCTGCTTCTACTTTCAGGTTTTTGAACGTAAAAATCTCTTTTCATCAATACTACACTTGCGGTGTGGCCCTTAATCATCTCTGTTGTTGATTGGATTCTTAAAATACATGGCGCTGAAAAACAAAAGCTTTACGAATTAGACTGAAATAATTATGCATAGCTACTATATATATATATATATATATATATATAATCTGTAAAATGTGTTGTGGAGGGCCAAGTTGCTGGAAGTGCATGCACAAACTTTTGCACAGAGATTAAAAAATTGATTTCATCATAAATAGCATATCATAGAGGACCTTGGCCACCTCTAGCTTTAATTTCATGCTTTTCATTGAAAATCTTTGAGAACTTTATATACATGCATGCAGAATTAATATATATTCAACAATATAAAACTGGCATATCTGATATGAAATAGCTGATGACATGAGGAAAGAAACGGTTATTATTTTTTTGTCACACAATTACCAAAGTTATTTTTTACACTCTGTGGTTGTTGAAGTCCAATGATTGAAAAAGTGATCCCTAAGAAGTGAATTCACCATTGCAATTATGCATAGTTACCGCTCTCAAAGGAACAAAAAGGGAAAACCAGAGAGGTAATTAACTAATGAAATTGGTAAGGCATCAATCTACGATATAAAGCAATTGAGATGCAAGTGTCACCAACCAACCCGGTTGAAAATAATTTCTTTATCTGCGTGTGTCCAACGTGAATCTGATAAAAGTGTGGGCCCCACCACCCTGCATGTGTGCCACGTGTACAATCCAGCCCATCTCAGAGTGAGCTCACAAGGATCCATTATAAGGCCTACAATTGTTGCAGTGTAACACTGCACATTTTAGCTCTTTGCTACAAACCCTAACTGGGCCACAATGGTACAGCTTCTCTCATTAAATTCACCACCTCAGTGTACTCACACCTTCACCATATCATCCATTTTCTGTTCACTCTTCTCTCACCACCATTCCTTTCACATTTCCATATACCCTCTTCAAACCTAGGGCTAAACCTACTGCCTACTACTTCCCTAATCTTTCATATATTATTCAAAATTCAAACATACTACCAAAAACTGATCTTTCTTTGCCCATTGCCTCTGTCTACCACTGCTTTTAATTTCAGTCTGAGGAATAACATAGCCACACTCACACAAAGAAAAAGGAAATTCAAGAT


Gene Sequence:
>Vu_25013(-)
ATGGGGCACCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGAGGACTCTGGTCACCTGAAGAAGATGAAAAACTCATCAACTACATCACAACCTATGGCCACGGTTGCTGGAGTTCCGTCCCAAAACTTGCAGGTAATTTTATTCATTCAGCAGTTTATAAGTGTTCTGTATGGTTAATTATATATTTTCTCAAAGTGCAGGCCTGCAGAGGTGTGGAAAGAGCTGCAGATTGAGATGGATAAATTATCTAAGACCTGATTTGAAACGGGGAAGCTTTTCTCCTCAAGAAGCAGCACTCATTATAGAACTTCACAGTATCCTTGGCAACAGGTTTTGTTTTTGTTTTTCTTCTTTTGTTTTGAGTTCTCCTTAATAATGATGATTTCCCCCGTTAATTGCTCTTTTTGATGATGATCAAAGGGAGCATTATTATATGAAAAAGTTTTGTTTGTTCACTTTTCTTAGCAAGAGGGCATTGTTTTGGACAGGTGGGCTCAGATAGCGAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAGCTGCTTTCTCATGATGTTGTTCCTTCTTTAGCCACATTTTCTGATATTCACGGTCTTGCCAATGGTTCCATGGAAAGTTTCTTCCCTTTAACTGACAACACTATCCTAAACTCCCATCATCACTTAGACCAGCTATACCTTCCCATCATCCCAACCCCAATCCTACAAGCCTTTGATCATCTCAACAATGATATCAAGATTGACATAAACAATTATCATAATAACAATAATAATAATAATCCCAATTTCCTACATTTTCAGAATCCAATGCCAGAAACAGTGCCACCATCCAACAACATTATTCCATCTTTGTTTGAATTAGAATCTACATGGTCCTCGTTGGGGTGTGTACCCATTCATCTTAATCCAAATCAACAAAGTCAAACAATCACCACCAAAAGCGATACCACCCCACACTTAATTCTTGAGAAATTCATCAATCCAAGTACATGGCAGAACCAGGCAGTGGAACCGACCATTGATCTTGTTCCAAAAGTGTGTGAGAGCATCGAGGATTATGTCTGCAGCATCCCATTTTCTTCTTCTGCCAATTCACAACATCAACACGAGGATGCTGTCGCCTGTTACACACCAGGTATTTGTCCACAAGATCAAATTGCAGTACCCAATCAAGTGGAGTACATTGATGCCATCATCATGTCATCGTTGCCATCCTCAACAACAACATCTTCATCAGTATCACTCTATCAAGCAGACAAATAG