Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24970 LG6 13351805 13356210 hypothetical protein GLYMA_15G029500
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 13351924 missense_variant p.Ser330Cys
A/G 13351925 synonymous_variant p.Asn329Asn
C/T 13352058 upstream_gene_variant
T/A 13352121 upstream_gene_variant
G/A 13352134 upstream_gene_variant
C/A 13352195 upstream_gene_variant
A/C 13352326 upstream_gene_variant
T/A 13352430 upstream_gene_variant
G/A 13352450 upstream_gene_variant
A/T 13352471 upstream_gene_variant
A/G 13352561 upstream_gene_variant
C/T 13352835 synonymous_variant p.Ser234Ser
A/G 13352910 synonymous_variant p.Asp209Asp
T/A 13353034 upstream_gene_variant
C/T 13353042 upstream_gene_variant
T/A 13353143 upstream_gene_variant
T/C 13353186 upstream_gene_variant
G/A 13353344 upstream_gene_variant
C/T 13353593 synonymous_variant p.Ser120Ser
T/A 13353609 splice_region_variant&intron_variant
A/G 13354033 upstream_gene_variant
A/T 13354108 upstream_gene_variant
T/C 13354132 upstream_gene_variant
T/A 13354139 upstream_gene_variant
G/A 13354179 upstream_gene_variant
G/T 13354478 upstream_gene_variant
G/C 13354479 upstream_gene_variant
G/T 13354498 upstream_gene_variant
A/C 13354500 upstream_gene_variant
T/C 13354551 upstream_gene_variant
G/T 13354554 upstream_gene_variant
A/G 13354620 upstream_gene_variant
G/A 13354754 upstream_gene_variant
T/A 13354788 upstream_gene_variant
A/T 13354792 upstream_gene_variant
T/C 13354834 upstream_gene_variant
A/G 13354883 upstream_gene_variant
C/T 13355041 upstream_gene_variant
A/G 13355048 upstream_gene_variant
T/A 13355074 upstream_gene_variant
T/G 13355098 upstream_gene_variant
G/A 13355292 upstream_gene_variant
A/T 13355295 upstream_gene_variant
G/A 13355301 upstream_gene_variant
T/C 13355304 upstream_gene_variant
A/T 13355310 upstream_gene_variant
T/A 13355366 upstream_gene_variant
A/G 13355383 upstream_gene_variant
A/C,* 13355420 upstream_gene_variant
A/G,* 13355465 upstream_gene_variant
C/T 13355486 upstream_gene_variant
T/C 13355490 upstream_gene_variant
G/A 13355492 upstream_gene_variant
A/G 13355505 upstream_gene_variant
T/C 13355510 upstream_gene_variant
T/C 13355511 upstream_gene_variant
T/C 13355517 upstream_gene_variant
C/G 13355546 upstream_gene_variant
G/A 13355559 upstream_gene_variant
G/A 13355565 upstream_gene_variant
A/G 13355576 upstream_gene_variant
T/A 13355629 upstream_gene_variant
A/T,* 13355639 upstream_gene_variant
T/A 13355686 upstream_gene_variant
A/C,* 13355709 upstream_gene_variant
C/T 13355883 downstream_gene_variant
G/A 13355884 downstream_gene_variant
C/T 13355984 missense_variant p.Gly76Glu
T/C 13356166 synonymous_variant p.Ser15Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24970.1
MRQSKVRPNAASDESPDVQHYPQLAHGGWSRRGREFCEARRAFLNSYHLSLERNNNGSFKEKLKKSVKEVNEAAMGVVLSMHQTDMQCNATSNSLSSSHALKSHPVTSFSVLNHIKYLTGFVVAQGKRTDMKIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPRCDICQDKPAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVASSSSCTKDNEKSHLEPPNRNAQQVSTKVPSQQVPSFTSSWAVDDFLELTGFESPEKKESLQFGELEWLTDVGIFGEQFTQEALAAAEVPQLPVTNNSSSVASFRTSKSYMSHKKPRIEVLNDDDDEEYFTVPDLG*


CDS Sequence:
>Vu_24970.1
ATGCGACAGTCCAAGGTTCGTCCAAATGCAGCTTCTGATGAATCACCTGATGTACAACACTATCCACAGCTTGCCCATGGAGGGTGGTCAAGGCGTGGTCGTGAGTTTTGTGAGGCGAGAAGAGCGTTTCTGAACAGTTACCATTTGAGTTTGGAAAGAAACAACAATGGAAGCTTCAAGGAAAAGTTGAAGAAATCGGTGAAGGAGGTTAACGAAGCCGCCATGGGAGTTGTTTTGAGCATGCATCAAACTGATATGCAATGCAATGCAACATCCAATTCCTTATCTTCCTCACATGCTCTCAAATCTCATCCAGTCACTTCTTTTTCTGTCCTCAACCACATTAAATACTTGACTGGTTTCGTTGTTGCACAAGGGAAAAGAACTGACATGAAAATTCAGTGTGATGTGTGTGAGAGGGCTCCGGCAACAGTGATTTGTTGCGCAGATGAGGCAGCTTTGTGTGCCAAATGTGATGTTGAAGTTCATGCTGCAAACAAACTTGCAAGCAAGCACCAAAGGCTTCTCCTTCAATGTCTATCAAACAAGCTTCCCAGATGTGACATTTGCCAAGACAAGCCAGCATTCATATTTTGTGTTGAAGACAGAGCACTCTTCTGTCAGGACTGTGATGAACCAATTCATTCAGCTGGAAGCCTTTCTGCAAACCACCAGCGCTTCCTAGCTACTGGTATCAGAGTGGCCTCGAGTTCTAGTTGCACCAAAGACAATGAAAAGAGTCACTTGGAGCCTCCCAATAGGAATGCACAACAAGTTTCCACCAAAGTTCCTTCTCAGCAAGTGCCTAGCTTCACATCCTCTTGGGCTGTTGATGACTTTTTGGAGTTAACAGGCTTTGAATCACCTGAGAAAAAGGAATCTCTACAATTTGGAGAGCTGGAATGGCTTACAGATGTGGGTATTTTTGGTGAACAATTTACTCAGGAAGCATTGGCTGCAGCTGAAGTACCTCAGCTTCCAGTAACTAATAATAGCAGCAGTGTTGCCTCATTCAGAACCTCCAAGTCCTACATGTCACACAAAAAACCTAGGATTGAAGTCCTAAATGATGATGATGATGAGGAGTACTTTACTGTGCCTGATCTTGGCTAG


Promoter Sequence:
>Vu_24970::LG6:13356210-13358210(-)
ATTAAAAAAGGGCCAATTTTAAAAGGATATTTTTCGATTAGCAGTTTTAATTCTGCTAAAGCCCCATGAACGTTATTATTATTCAACCTTAAATATCTGTTAGTACCCCTCTTATTGATCCCACTTCATAACATGTAGCTACTTTTTTTTTTTAATTTCAAATTTAAGTCATGTTTTAGTTTTGGATCTCAACACATATCAATGTGATGTATCTTCGTAATTTTATCACTTTCCCTCTTTAAATTTATTGATTTATTTTAAAACAGTTCTGAGAAATCATGTGATTGAAACTAATCTTTATAGTTCAGTATATTTATGTATTTCATGAATCACTTAGTTTCATGATGTTTTATTTATCATGTATCAGTTTGGAAGAGATTATCAACAACCTAGTTGGACTTATGTTGTGAGTGTTTGGAAGAGTTTATGAAAATACCTTATGACTTACCAGACGATGGTTTTGGTTGATCTTAATAAGCTCCGAAGGATAAATTTATGTGAAGCTTAAAAGACCAACTCCAAATTCCAACAGGGTCAAAAATATAAAATAAGCACTGTGTGAATGATATATATATATATATAATATATATATATATATATAATATATATATATATATATATATATATATATATATATATATATAATTTTAATGAAAATATTTTGTGTTGCAGTCAAAGTTTGGTATTCAAAAAACATGCTGCTTGGTCATTCAAACTAAGCATATGCCAACTAAGTATAAAAATTCTAGATTATTACTGATTAGCGGCGTGCTTGGTCATTCTATTGATAGCGTGTCCTCATTTGACTCTATGGACCACGTAACTTAATTAGATTATATTCACATTCCATTCACTAGCTGATTGTTTCTTTACATACAGGAGAAGGATGATCCCAATCCTATTATTATTATTATTATTATTATTATTATTATTATAATTATAGTAATAATAAGAATAACAATAATAATAATTATAAAATTTTAATCTTAATAGTAAAATTTATAATTCTAAAATTAGTCATTAATTTGTTAGAAATCAATAAGACGTTATAAATAGTATATAAATATATATAAATTTTATCTTAAAAAATTGATTTTATAAAATTAAATTAGACTTAAAATTTATTATTAATATATGGAAATTTATTGAAAAGATGAAGAAAAAAATGTAAAAGATAAAAGAACAAAAAAAAGGGTTTTTTTTTTCAAATTACATTACGTGTAAATAAACTTTTTGATTCGCTTAACATCTAGAGATCTCAGAAAAAATTTGCTGTTCAAGGACAATGCCATATTTCACACATTACTAAAATATAGAATGAACTTACATGAATTTTTTTTTTTTGAAAAAAAAGGATTTCAATTCCACATGTAAATTCATCCTTAACCCTTGATATATATAGTTTTATTAATTTATAAATAATATATGTGGTATGAACAGAATTTGGAGAAACTAATTGCCATCATTGCTGACCGGTAGCGTTTGAATCACGCTTTTCCAAATTTCAACTATTTTATTGCCATTTGGCAACAGTAGTAATGGATAAGTTGCAGACTCCTTTTGCTTATTCCATGCACATGCTATGCTGAATCAAATTCAAACCTTGAAAACAAAATCAGAAACAGAAGAAAATAGCATCTAACTTTTGACCTACGTTATCCGTTCTAGAAAGGAAAACCGCACTGCAAAACTTCCTGAATCTCATTGCCTTTCAAAGGTAGTTAAAGTTATCAACGAAAATTTACATTCTCCAAAATAAATAACATGTCATTTTCAAGAACAGTTTATACGCATCAAACTTCAAGCAGGATTTGCAAATTTAATCTTCATCTTGGGTGTAACCAAGCTACCAACCATGTTACGCTAATTTCCATTACGGTTTAACCACTACACTATGTTTATCTTAAATATATGTTACTAACTATATAAACCCTTTTGTTTCTACTAATGTTTCTTCATATCCACACATGTGGTTCTCGTTGTTTCATCGTACTCTTGTA


Gene Sequence:
>Vu_24970(-)
ATGCGACAGTCCAAGGTTCGTCCAAATGCAGCTTCTGATGAATCACCTGATGTACAACACTATCCACAGCTTGCCCATGGAGGGTGGTCAAGGCGTGGTCGTGAGTTTTGTGAGGCGAGAAGAGCGTTTCTGAACAGTTACCATTTGAGTTTGGAAAGAAACAACAATGGAAGCTTCAAGGAAAAGTTGAAGAAATCGGTGAAGGAGGTTAACGAAGCCGCCATGGGAGTTGTTTTGAGCATGCATCGTAGGGTGCTGTCTAAGAGACGACTTAAAATAAGAGTTTTTAGGATCAGAATGATGTCACACTCGCTGGCTCTTGTTACCGTTAGATGTTTCATTCCATGGATCAACAAAAATGACATCATCATGTGAACATCATGTTTCTAATGTTGTTTAATTACAAATTATACTTCATCTCAACAATAATATACATGTATTATTATCCTTCCATGCAAACTTTTAGAACAATAATTGATTCACACATTTTTACACTTATTTTAGAGATAATATAAAAATAAAATATCATAAAAAACTAAAATTTTATATATTTTTTTAAAAAAACAAGTAATAAACAAAAAAAATAATAATATCGAATTAATGTAATAGATTGGTTTAATTTTTTACTATAAATTTCAAATAGGTCTCTCGCTTTTTTTTTCGTGTTGCATCTTATTTTCGTAAAATATTTACAATTAGAATCTATAATTAAATTATGCTAATTGTATTTTTTTAAATGATATGATTCGTTATTATGTTAATTAGGTGATTCTCATATGTAAATTAATAATTTTTAATTAAAGAAATTGGGAAAATTTTAATTAAACTTAGTATATTTTTTTTAATTAGGAATTGTGAAAAGAAATTGAAGGAAAACTACGAGTGTTTCTTAAACTCATGTGAAATAATCATTTCTCACACTTTTAATATAAGGATTTCATTTTCTAAATAAAAAATAATGCAAAGAATTTTTTTGTATATTATATATATGTGATATGTGATATCCACTTACCTTTTATGTGGACGTAATCAAGTTTTAGGATGATGGGTTTCTAGTTGTTCAAGTGTTGCCAACAAGATTTGTGACATTGCATTTACTGAAATAAATTTCAACAAAATTTGTTGTACACTAATTTATCCATTCACTAATACATATTTTTAATTGATATGTACAAAATAATGAGTATGATTATTTAATTATTTGTTTTTTATGAATAAATATAAGTATTATGATATTCAATTCGTAAATATCAGCTGACTACTACTTACTCTTAATTATTGATAAATTTCATATTAATAATTTTTAAAAATTAAGTGATCAAAATAATGTTATATATATATCTATTTGTTTATTTGGATAATCTTATCTTTTAAAAAATTAAGTTTAAATTTAGGTGCAACTCATTCAAATTTATTTTTAAAAAAATAAATTTATTCACTTTAATATTTTAATATACAATTTTTATTTATAATATACTTTAAAATTAATTTTTTCATATAAATGTATATTTTAAAGAATAAAAAATACATCCATTGATATTTTTTCACGTCCAACTGGTTGATTTTCTTAACATACACGACCCAACCTCTTGTAATTTCTACCCACAATCATTATATTTTAGATTATTTTCAAGATATAAATTAAATAATTATCTTCTTAAAATTTCGAATTATTAATTATAAGATACTTTTTGAAAATAACAAGTTTTCTACAAACAATGTTATATGTGGCCTGATTTTGACGATTCATTCCATCCAATTGGATTTGTCAATTTGTTGACTTAAATATCAAATGCACGAACGTTTACTTAATCACACGTCTTCAAATATTTATAATTTCAGTTTTGATTTTTATTTTTAATTGACTGCTATTCTTAATTTGCACTAAAATATTAATTTTTAATTTATTTACATTAATTTTCATATTTATAGTAAACAAAAAAGATGTATTTATCAAGATAATAGAATTATTTTAATAACATTATTTCAATAAATAACACTCATTATTATTAATTTTATTTCTAATGGGTGCAAAAAAAATTAAAGAACAGATATTTAATATTACATCAAGAGAGAGTACAGTATCTGTAAATTCTGAAAAATTGGGAGACACAATTATTCAAAAAGAAGTAGTTGTATGAGATTTTGAAAAGATAGATTGCAGCTGTTTTTAAGTGTCTTGTTATTTTAGAGAAGATAGAATGAATATGAAGGAAATATAGTGTCCACTCAAAAATGGCTTGTACTTGTTGATGCATCATCCACAGCCACACATACCATTGACAAAGTAACCCCACTAATCCCTGTTGGTTTTATTGTTGTTGCAGAAACTGATATGCAATGCAATGCAACATCCAATTCCTTATCTTCCTCACATGCTCTCAAATCTCATCCAGTCACTTCTTTTTCTGTCCTCAACCACATTAAATACTTGTTCTGTTCAGTACTTCAATAGTTAATCGTGTTATCTTTTTGTTCTCTTCTCTACAGCTTGTCCTAATCTTTCTACTCCATGATTGTCCTTGTTTTGGCTTTGCAAAGTCCTGTCTGCTAAAGGGTTCTGAGAATTTCTTTTTGTGAGAATTTGTTGTTTTTCTGATAAAGAAGGACTGGTTTCGTTGTTGCACAAGGGAAAAGAACTGACATGAAAATTCAGTGTGATGTGTGTGAGAGGGCTCCGGCAACAGTGATTTGTTGCGCAGATGAGGCAGCTTTGTGTGCCAAATGTGATGTTGAAGTTCATGCTGCAAACAAACTTGCAAGCAAGCACCAAAGGCTTCTCCTTCAATGTCTATCAAACAAGCTTCCCAGATGTGACATTTGCCAAGTAAGAACATCAAATTTCTGTGTCTCTAGTTTTATGATTCCTTAAATAATTCGATGACCTGGTTTTATGCTAATAGACATGCTAATAATGATGTTATACATGCCCCAGTTGAACCTATTAAACACTGGACAAGTCTTATTTTATTTCTTGAAGACATATCAAGAGTTGATTAAACTTTCTGGTGGTGTGTGATGAGAATGTTACTTGCTATTTTCTATGTTCTTATTCGATGTAGACACTAGTTAAACTAGGATCTTGAGCTAGGTTAACTGATGGGACATAGTTTAGGAGAGTTAACACCTTTGCTGAAATGGGAATACAATTGTCTGATGAATCTGATGGATGTTGGAATTGTAAAAGCTTCAAAAATCTTTGTTGCTCATTTTGTCTTCTTCTTTTTCTCTCCACCAATAGGACAAGCCAGCATTCATATTTTGTGTTGAAGACAGAGCACTCTTCTGTCAGGACTGTGATGAACCAATTCATTCAGCTGGAAGCCTTTCTGCAAACCACCAGCGCTTCCTAGCTACTGGTATCAGAGTGGCCTCGAGTTCTAGTTGCACCAAAGACAATGAAAAGAGTCACTTGGAGCCTCCCAATAGGAATGCACAACAAGTTTCCACCAAAGTTCCTTCTCAGCAAGTGCCTAGCTTCACATCCTCTTGGGCTGTTGATGACTTTTTGGAGTTAACAGGCTTTGAATCACCTGAGAAAGTAAGTGGCAGCTTTGTTTCATAATGATTTAGTTGCATGTGTATATAATGAACTAACTCACAAAGTAATTAGAGTGTTATAGCTGAAATAAGTTAGTAGCATTACATGTTTCATTTGTTGTCCCTTTGGACATCTTTGAATTGCCACATGAAATAATAACATGGTTGTAGCCAATCATCATGGTACATGTGAAAATTTTGATTTATGCTGAAGACACCCCAGCATATAGAAAATTCTTTAACTAGGTTATTGGTCTTCTAGAATATATCCCATCATTGACAATCCTCTTAGCCTGATAGCCTGATGCAAGTGTCAGATCAATGCAGTTTGGTTTTCATTGATTTTTTCCTGATCAAGAAATTGATAAGGACAAGAATTACACTGAAGAATTTGTCTTGAATTAATGCTGCACAAAATTGTTTTCTTCCTTATTTTGATACATGCCATCACTTAATCAAGCATTCATTTTTTTATGAGAGATAACCATATGTTTATACATAACATTGTATTAAACTCTGGTCCTTGATTTCAGCTTCTTCTTCCTTTTTATGTTTTTCTATTATTGTTACTCAACAATATTGTGATTTGCCTCTTCTTGTGATTCTGGTTTTGTGACTGTGCTCAGAAGGAATCTCTACAATTTGGAGAGCTGGAATGGCTTACAGATGTGGGTATTTTTGGTGAACAATTTACTCAGGAAGCATTGGCTGCAGCTGAAGTACCTCAGCTTCCAGTAACTAATAATAGCAGCAGTGTTGCCTCATTCAGAACCTCCAAGTCCTACATGTCACACAAAAAACCTAGGATTGAAGTCCTAAATGATGATGATGATGAGGAGTACTTTACTGTGCCTGATCTTGGCTAG