Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24969 LG6 13349619 13350785 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction
SNP Position Effect Amino acid change
T/A 13349739 synonymous_variant p.Ser349Ser
G/C 13349810 missense_variant p.Leu326Val
T/C 13349823 synonymous_variant p.Glu321Glu
G/A 13349861 synonymous_variant p.Leu309Leu
T/C 13350084 synonymous_variant p.Leu234Leu
G/T 13350104 missense_variant p.Leu228Ile
C/T 13350261 synonymous_variant p.Ala175Ala
A/T 13350282 missense_variant p.Ser168Arg
G/T 13350329 missense_variant p.Leu153Ile
G/C 13350436 missense_variant p.Thr117Ser
G/A 13350486 synonymous_variant p.Asn100Asn
T/A 13350487 missense_variant p.Asn100Ile
G/T 13350696 synonymous_variant p.Thr30Thr
G/A 13350705 synonymous_variant p.Asn27Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24969.1
MPSQTKSSTLQDDTLSLLAIKNAIDPNSITPSSYLSTWDFSVDPCESTGSQFLGILCYLPLDNSSSRVTEVDLDAIGYEGFLTPAIGNLSELTVLNLNNNKFRGPIPETIGKLRKLTSLTMSQNFFTGAIPQAITGLNNVRYIDLSGNRLSGLIPTDITALRTLSYLSLSNNEFAGRIPNLTGLWQLNTLDLSFNQFYGDLPNLPVSLRNMYFRHNILSGHLTPLKGLIHMKWLDVSDNRLSGAINGNVFSLRNVVHLNVSFNRFTALDVINYSLLEPSLQVLEAQGNHLKGHLPVNLVSFVNLTSINLANNQFSGSIPLEYGTKLKSSWRSLHLDYNFLTGNLPREFSHSTNVKGSLAKNCLKCPTNVGLCQGRQRPSSECVGQHNV*


CDS Sequence:
>Vu_24969.1
ATGCCATCACAAACCAAATCCTCAACCCTCCAAGATGACACTCTTTCCCTTCTTGCTATAAAAAATGCCATTGATCCCAACTCAATCACCCCCTCTTCCTATCTCAGCACCTGGGACTTCTCAGTGGATCCATGTGAAAGCACTGGCTCACAATTCCTAGGAATATTGTGCTACTTGCCCCTTGATAACTCCTCTAGTAGAGTAACAGAAGTTGACCTCGATGCCATTGGCTATGAAGGATTTTTGACACCAGCAATAGGGAACCTCTCAGAGTTAACAGTCCTCAACCTCAACAATAACAAATTCCGTGGTCCAATACCAGAAACCATTGGCAAACTAAGAAAACTAACCAGCCTCACAATGTCACAGAACTTTTTCACTGGGGCAATTCCACAAGCAATCACAGGACTCAATAACGTTAGATATATAGATCTTTCAGGGAACAGGCTCTCAGGTCTAATCCCCACTGATATCACTGCTCTGAGAACCTTATCATACTTGAGTCTGTCAAACAATGAATTTGCGGGAAGAATTCCAAACCTCACAGGGTTGTGGCAACTTAACACATTAGACCTCAGTTTCAACCAGTTTTATGGGGATCTTCCAAACCTTCCAGTGAGTTTGAGAAACATGTATTTTCGCCATAACATTCTTTCAGGGCACTTGACACCCCTCAAGGGACTCATACACATGAAATGGTTAGATGTGAGTGACAACAGACTCTCAGGTGCCATCAATGGGAATGTTTTTTCTTTGAGAAATGTTGTTCACCTCAATGTTTCTTTCAACCGTTTCACAGCATTAGATGTTATCAACTATTCTCTGCTAGAGCCAAGTCTTCAAGTGCTTGAGGCTCAAGGGAACCATCTGAAGGGTCATTTGCCAGTGAATTTGGTTAGTTTTGTGAACTTGACCTCGATCAATCTGGCCAACAATCAATTCTCTGGTTCAATTCCCTTGGAATATGGCACAAAACTGAAGTCATCATGGAGAAGCCTGCACTTAGATTACAACTTTCTAACGGGAAATCTTCCTCGGGAGTTTTCACATTCCACAAACGTTAAAGGTAGCCTTGCAAAGAACTGTCTAAAGTGCCCAACAAATGTTGGTCTTTGCCAGGGGAGACAGAGACCATCTTCAGAATGTGTCGGCCAACACAACGTATGA


Promoter Sequence:
>Vu_24969::LG6:13350785-13352785(-)
ATAGGAATGCACAACAAGTTTCCACCAAAGTTCCTTCTCAGCAAGTGCCTAGCTTCACATCCTCTTGGGCTGTTGATGACTTTTTGGAGTTAACAGGCTTTGAATCACCTGAGAAAGTAAGTGGCAGCTTTGTTTCATAATGATTTAGTTGCATGTGTATATAATGAACTAACTCACAAAGTAATTAGAGTGTTATAGCTGAAATAAGTTAGTAGCATTACATGTTTCATTTGTTGTCCCTTTGGACATCTTTGAATTGCCACATGAAATAATAACATGGTTGTAGCCAATCATCATGGTACATGTGAAAATTTTGATTTATGCTGAAGACACCCCAGCATATAGAAAATTCTTTAACTAGGTTATTGGTCTTCTAGAATATATCCCATCATTGACAATCCTCTTAGCCTGATAGCCTGATGCAAGTGTCAGATCAATGCAGTTTGGTTTTCATTGATTTTTTCCTGATCAAGAAATTGATAAGGACAAGAATTACACTGAAGAATTTGTCTTGAATTAATGCTGCACAAAATTGTTTTCTTCCTTATTTTGATACATGCCATCACTTAATCAAGCATTCATTTTTTTATGAGAGATAACCATATGTTTATACATAACATTGTATTAAACTCTGGTCCTTGATTTCAGCTTCTTCTTCCTTTTTATGTTTTTCTATTATTGTTACTCAACAATATTGTGATTTGCCTCTTCTTGTGATTCTGGTTTTGTGACTGTGCTCAGAAGGAATCTCTACAATTTGGAGAGCTGGAATGGCTTACAGATGTGGGTATTTTTGGTGAACAATTTACTCAGGAAGCATTGGCTGCAGCTGAAGTACCTCAGCTTCCAGTAACTAATAATAGCAGCAGTGTTGCCTCATTCAGAACCTCCAAGTCCTACATGTCACACAAAAAACCTAGGATTGAAGTCCTAAATGATGATGATGATGAGGAGTACTTTACTGTGCCTGATCTTGGCTAGGAACACAGATTCCATTTGGGGTGTTACATGCATGATTGGAAAGACTAATTATGAGGAAAAAATGTTTTTTTTCTTCTGCAAAAGCTCTTTCAGTGAAATGTCGACAAAGATTATTATTTTCTCAAAAATAAACTATTTCAACCAGACACGATGATATGGTGTATATTCAATCATTCATACTTCACTAAAGACAATCATTTTTGCAACTTGTGTGTGGAGTTGATAAGTATTGTACTTTAGGTGTTTTTCTGCTGGATAACATAGAATTCCATGCTTTTGGAGAATGAAATTTTCATGTCCTTAGTCACTGTGCATGCTTCAATACACTAGGGATTCTCCCACTGTCACATCTTCCTAATTGATTCCAATAATTTGAGTTCATTTTGTTTGTATGCAACAAACAATGCTATTTAATTTTACTCATTATTACTAGTTGGTATAGTTTATAGTTAATTAGTAAATACGATTTTCTTATAGGTAATTAGTAAGTTACTTTTTTCATTTTTTTTAGGTTCCTATTCTTTTCTGTTACTGTTTCAAAGATCATGCCCAATTGAACCTTATTATAAAGTTACTTTTTTTATTTTTCTTAAGCCAACAATAAATTGGATATATCATCACTATTATTTAAAGTGTAATTTGGCAGAAACAACTTAGAAAAGTTAAAACTACTACAAAAACAAGACTACAAAATTCTCTGAAACAAGATTACAAGAGTTGTGTCCAAAGTTCAGTTGGTTCAGCTGCTTAATCTTTATGATATGTATCTAGGTAGACCAAGTTCTTGGCGTGGCTGAAGGCATTTGTATCACTTAGAAAATAATACTTTGTTCTGGAATGACCATGTTCTTGCCTCATCATGCACCTATCCCTCAGGGCTCTTATAAAAAAGCATTTCGAAATTCTTATCCACAAACAACATCAGAACTAAACCAAATTTCTCTGATATGATGGAGAAAAGAACACCTACTAAAATCCTCTTTCCTCTGTATTCCATCTTAACCATAATTCTCTGTCTC


Gene Sequence:
>Vu_24969(-)
ATGCCATCACAAACCAAATCCTCAACCCTCCAAGATGACACTCTTTCCCTTCTTGCTATAAAAAATGCCATTGATCCCAACTCAATCACCCCCTCTTCCTATCTCAGCACCTGGGACTTCTCAGTGGATCCATGTGAAAGCACTGGCTCACAATTCCTAGGAATATTGTGCTACTTGCCCCTTGATAACTCCTCTAGTAGAGTAACAGAAGTTGACCTCGATGCCATTGGCTATGAAGGATTTTTGACACCAGCAATAGGGAACCTCTCAGAGTTAACAGTCCTCAACCTCAACAATAACAAATTCCGTGGTCCAATACCAGAAACCATTGGCAAACTAAGAAAACTAACCAGCCTCACAATGTCACAGAACTTTTTCACTGGGGCAATTCCACAAGCAATCACAGGACTCAATAACGTTAGATATATAGATCTTTCAGGGAACAGGCTCTCAGGTCTAATCCCCACTGATATCACTGCTCTGAGAACCTTATCATACTTGAGTCTGTCAAACAATGAATTTGCGGGAAGAATTCCAAACCTCACAGGGTTGTGGCAACTTAACACATTAGACCTCAGTTTCAACCAGTTTTATGGGGATCTTCCAAACCTTCCAGTGAGTTTGAGAAACATGTATTTTCGCCATAACATTCTTTCAGGGCACTTGACACCCCTCAAGGGACTCATACACATGAAATGGTTAGATGTGAGTGACAACAGACTCTCAGGTGCCATCAATGGGAATGTTTTTTCTTTGAGAAATGTTGTTCACCTCAATGTTTCTTTCAACCGTTTCACAGCATTAGATGTTATCAACTATTCTCTGCTAGAGCCAAGTCTTCAAGTGCTTGAGGCTCAAGGGAACCATCTGAAGGGTCATTTGCCAGTGAATTTGGTTAGTTTTGTGAACTTGACCTCGATCAATCTGGCCAACAATCAATTCTCTGGTTCAATTCCCTTGGAATATGGCACAAAACTGAAGTCATCATGGAGAAGCCTGCACTTAGATTACAACTTTCTAACGGGAAATCTTCCTCGGGAGTTTTCACATTCCACAAACGTTAAAGGTAGCCTTGCAAAGAACTGTCTAAAGTGCCCAACAAATGTTGGTCTTTGCCAGGGGAGACAGAGACCATCTTCAGAATGTGTCGGCCAACACAACGTATGA