Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24924 LG6 12952193 12954203 PREDICTED: zinc finger protein WIP2-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 12952306 synonymous_variant p.Ser38Ser
T/G 12952400 missense_variant p.Cys70Gly
G/A 12952523 missense_variant p.Ala111Thr
T/A 12952661 missense_variant p.Ser157Thr
G/A 12952758 intron_variant
T/C 12952897 intron_variant
T/C 12952972 intron_variant
A/G 12952995 intron_variant
A/G 12953148 intron_variant
T/C 12953164 intron_variant
A/T 12953238 intron_variant
C/T 12953239 intron_variant
T/A 12953399 intron_variant
T/C 12953447 intron_variant
A/G 12953711 intron_variant
T/A 12953718 intron_variant
C/A 12953947 missense_variant p.Pro239His
A/G 12954191 synonymous_variant p.Ser320Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24924.1
MTHPFCSNDFNAWFDLNSPFLFSSSSSPCSNPPFYFPSAFHHRQFSPPKEALPFLNLSLARGEDLESSFCAMEVNREKERESSISSNNNNNSLDDETVTVALHLGLPTTTASADSTSNTYSDREKAIACEYSPSRINKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPECKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDCFDHDDEAGSEIEQENVNEPLVSSHG*


CDS Sequence:
>Vu_24924.1
ATGACTCACCCCTTTTGCTCCAACGACTTCAATGCCTGGTTTGACCTCAATTCTCCATTCCTTTTCTCTTCTTCTTCATCACCTTGCTCCAACCCTCCATTCTATTTTCCTTCGGCTTTTCATCATCGTCAATTTTCTCCCCCCAAAGAAGCACTTCCTTTCCTTAACCTAAGCCTTGCAAGGGGTGAAGATCTTGAATCTTCCTTCTGTGCCATGGAAGTCAACAGAGAGAAGGAGAGAGAATCAAGCATATCGTCTAATAATAATAATAACTCTTTGGATGATGAAACTGTGACGGTGGCTTTGCACTTAGGGCTTCCAACCACTACTGCTTCTGCTGATTCGACTTCAAACACATACTCAGACAGAGAAAAAGCCATTGCTTGTGAGTATTCTCCTAGTAGAATTAACAAGGGTCAGTATTGGATTCCTACCCCTGCTCAAATTCTCATCGGTCCAACACAGTTCTCCTGCCCCCTTTGTTTCAAGACTTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGGCCAGAGTCTCTGAGGGGAACTCAACCAACGGCAATGCTTAGACTCCCTTGCTATTGTTGTGCTCCTGAATGCAAGAACAACATTGACCATCCAAGAGCAAAGCCTCTCAAAGACTTTAGAACCCTTCAAACTCATTACAAGAGAAAGCATGGAATCAAGCCCTTCATGTGTAGAAAATGCTGCAAAGCTTTTGCTGTTAGGGGTGATTGGAGGACCCATGAGAAGAACTGTGGGAAGCTCTGGTATTGCTCTTGTGGGTCCGATTTCAAGCACAAAAGATCCCTCAAAGATCATATCAAGGCTTTTGGGAATGGACACAAAGCTTATGGAATCGACTGTTTTGATCATGATGATGAAGCTGGCTCTGAAATTGAGCAAGAAAATGTCAATGAACCTTTAGTTTCAAGTCATGGTTGA


Promoter Sequence:
>Vu_24924::LG6:12950193-12952193(+)
GCAAAGTAACTAGAGAGATAACTGAAGGATGGGGAGAAGGGAAACATCATTGCTAAAAGCTAACCATTGAATAAAAGAGAGTTTCACATATTAGTTTTATATAAAAAGGTAGAAAAAAAAAACATTCTTTTAAGGGAAAAAATTGAACCATTCATTCCTAGCTTAGTCACATCTTTTTCTTCTTCCTTAAATGGATACATATTGAAGAAATGTCAATAGTCTTTAACAGCTGAAATCAGTATTTGGGCTTCTAAATTTTAACATAGTTCTTATTGACTTGTTGTCATAATTTCCCACCTTTCTTTTTGGTGAACCTTTTACTGGTAAAGTTGTGTGCCAAGATTCACTCTGTGATTCCTGATCAATTCAGAATGTAACGAGATTTTAGTCGTACGTCAACTTTACTTTATAATTTAAAAAATTGATTACTTTATGTAAAGAAATATAAACTATGCATATTCATCATAATAAAGTTACAAATAAGAAGTAATTAAAAATGAGCAGTGGCCAAAACTGTCATTCTTCCTACAATCATACTTTGCATAGTGTTTTTGTATGACTAACAAACAACTACGTATGCTTCAAACTTATAAATAGTCATTAAATATCAATGTTTGTTTGCTTCATCAGTACTTAAAATTTGCAAGAAAATTGTAAGTCTTTTACTTAATGAACTTTTTCTGTCCATTATCAGTTTTATCCCATCTAAGTTAATATTTTTATTTGTGGTACAATATAAGAATGTAAAGGAATTAATGTTTATATTTCCTTGAAGAGCAGCTAAAAATGGATAATGTTCTCTACATACGTTTGATTTGAAAAGAACAATGAAATAGACAGTGATGATTTTTATAGTTTTTATTTTGTTTTACACCATGATGTTGTGTATTGTATAACAGGCTTACAGACATTGTTGATAAAAATAAGAAAAGAAAAGTAGAGAAAGAGGGTGTTGATCATGTGGGTGACAAGGTGGTGGTCAGTGATAGCAGTTAGCCATTAACAGTATTTATGTGTAAGTGTTTGTGTGAAGCGAAAGCAGATGTTAATGTTGGTGTTCTTCCCTTAAGTCAAAAAAATGGCACTGAAGAAAACATGTGAGCAGAAGAGAAAGAGAGGTAGATCCAACAGTGAACGTTTGCATGTAACAGGTGAGAACAGTAACGGAGACACAGACTGAGTCTTTCTGCTCCTAAGATCAGCCAAACCCGACCAGAGCGTGCACCCCAAAGCACTTGTTGCTTTTTCTCCAAACTATTTGTTTCCCAATATCATCACAACGAACACCACTGTCACTCTTCTCTTAATTCCCTTTCAACCATTCAACTAATCTACTATTTCTTATACATCATATATAAATACTCATAATTAACCTCAATCTTAATCTTTCGAGAATGATTAATGATGTCTGTTATCGTCTGTAGTATGGTGTGAAATGAGAGAAGCTTGTGTTGACTGACTTTCGATTTGGCATTATTCCCCACCACCACATACACAATGGTAGGTAGAGCTGTGACCATATTTATTCTTAATGAACGTGTTACATATATAAAAGAGTATTTTATAGAAAAATCTGTGCAACCTTTTTTTGATCACTGTTCTTGCAAACGTTCTTTCAAGTCCCAAGGTAATCTCATCATCTAGGACCTGACTATTTTTTTTTTATTTTTTCTCACTCTCTCTACCTCTTTTGTATATTTATTTTGCCCGTTGTTATGTCACACTTCGCAAGTGATTTCTTGTCTCCCTTTCTTTACTTTATTGGGTCTGCTTTACCAACATTGGATTTCTAACTCCTCTTCATCCTCACTCTTCCATTATGCTTATTATTTTCTTAACTCTCAAACTTATCTTTTGCTTACCTTTATTTATCTACCTCTCCCTCCACTCCTCCTCCACCACTACCACTATCCTTCCCTTTATATCTCTTCTGTCTTTGATAATAACCTATAATCCTTTCTATACTCTCATATAGCTCTTCCTTTCTCACCCTCTCATCA


Gene Sequence:
>Vu_24924(+)
ATGACTCACCCCTTTTGCTCCAACGACTTCAATGCCTGGTTTGACCTCAATTCTCCATTCCTTTTCTCTTCTTCTTCATCACCTTGCTCCAACCCTCCATTCTATTTTCCTTCGGCTTTTCATCATCGTCAATTTTCTCCCCCCAAAGAAGCACTTCCTTTCCTTAACCTAAGCCTTGCAAGGGGTGAAGATCTTGAATCTTCCTTCTGTGCCATGGAAGTCAACAGAGAGAAGGAGAGAGAATCAAGCATATCGTCTAATAATAATAATAACTCTTTGGATGATGAAACTGTGACGGTGGCTTTGCACTTAGGGCTTCCAACCACTACTGCTTCTGCTGATTCGACTTCAAACACATACTCAGACAGAGAAAAAGCCATTGCTTGTGAGTATTCTCCTAGTAGAATTAACAAGGGTCAGTATTGGATTCCTACCCCTGCTCAAATTCTCATCGGTCCAACACAGTTCTCCTGCCCCCTTTGTTTCAAGACTTTCAACAGATACAACAACATGCAGGTAACCATTAATTCAAGATGGTTCATATAGAGAGAAAGAAAAAAACATCGCTTTCTTTCTTTTAATTACTTTTTTCACTCCTACAATCCTACCACATACTTTCCCAGATCTTACTTTTGAGCAAAATTGTTGAAAAGGAAATTTCCATTTGTAAATATCACCACTTTGATTATTTTTAGCCTATAACCTATGTTGTCTTCAATTCGTTTGTGTGTAGTGTGTAATTTAGGGTTTTTGTAACAACTGTTGCATGTCCTTTTTTTTTTATCTTAAGCTAATCAATCTCAAAGGTTTTACCATGACCCTTTTGTAGTCGAAGAGACGAAAATGGAAAAATCCCACTCCAATGAAAGATGAGTACTATTTAAGGCTATATATTTTTGTGGACCTGCAAAGTGTTATTAACTGGTGTTAAACAGAAAACAGGAGGAAGTAAACTATTGATATCTAGGGCTTATTAAATCTTAAGCTAAAGATGTTATAGAGAGAACAACGTTAGCAGCAACAGGAGGTGACATAAAGTGAAAGAACATGAATAAATTAAGTTTTCATTTCAGAAGTGTATAGTACAACACGCATGGAGTGAGGTTTTATTTTGATCTCTACAAAACATAAACAAAAATAGCTGTCCAATATTCCCTTGTTGGGCTTCCGAGCTACTACTTTATTAGGATGCCCTACATTGTTACCTTTTTCTTTACTCCTAGACCGTAGGTGACTAAGAAGTATTGAAACATGTTGAAAAAGACGCGGGTCCTTGATTATCCTTAGGCTTTCTGACTCAAAATCTTGGCCTGTTCGGGAAAATAATTCTTGATCTTAACAATGTTACATGCAATGCAACAAAGATAGTGTTTGTAGGGAATGCGATTTCACAGTGAGGCTTTTGGACTCTATCGATGGTTCCAAATATTTTACATGTGAATGCGAGTGAGTGAATGATTTTCATTCTTCCCAACCCCACATCGATCCCTTTTGAACTGTTTACCTATTTGCTCTTGAATGATGATGATGTTGCTCCAAAAATTAACCTATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGGCCAGAGTCTCTGAGGGGAACTCAACCAACGGCAATGCTTAGACTCCCTTGCTATTGTTGTGCTCCTGAATGCAAGAACAACATTGACCATCCAAGAGCAAAGCCTCTCAAAGACTTTAGAACCCTTCAAACTCATTACAAGAGAAAGCATGGAATCAAGCCCTTCATGTGTAGAAAATGCTGCAAAGCTTTTGCTGTTAGGGGTGATTGGAGGACCCATGAGAAGAACTGTGGGAAGCTCTGGTATTGCTCTTGTGGGTCCGATTTCAAGCACAAAAGATCCCTCAAAGATCATATCAAGGCTTTTGGGAATGGACACAAAGCTTATGGAATCGACTGTTTTGATCATGATGATGAAGCTGGCTCTGAAATTGAGCAAGAAAATGTCAATGAACCTTTAGTTTCAAGTCATGGTTGA