Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24913 LG6 12849375 12851609 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
T/C 12849505 missense_variant p.Thr266Ala
C/G 12849587 missense_variant p.Leu238Phe
G/C 12849639 missense_variant p.Ser221Cys
G/A 12849864 missense_variant p.Thr146Ile
T/A 12849920 missense_variant p.Gln127His
C/T 12850012 missense_variant p.Val97Ile
T/A 12850099 intron_variant
G/T 12850211 intron_variant
G/C 12850368 intron_variant
T/C 12850839 intron_variant
T/A 12850840 intron_variant
A/T 12850849 intron_variant
A/T 12850858 intron_variant
C/G 12850901 intron_variant
T/C 12850922 intron_variant
A/T 12850930 intron_variant
T/C 12850988 intron_variant
G/A 12851036 intron_variant
G/A 12851438 stop_gained p.Arg58*

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24913.1
MRKPELCSGKDSKFRKGLWSPEEDEKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSFLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSTTTASTSPNSSETSSEPSNNKDLNMGGFMPTQHHQHATFVPVFGSSPTQSMQTTVFNTMIERLDHELNMPHVGECLEGTGPCFSQNEAHNKSSYLENGVFGSVNIGIEGDMFVPPLENLNTSNNHNLSSTCKSYFDDINSILNNCNIGISGENKEGVENLFQQDAEWDFEELMKDVSSFPFVDFSF*


CDS Sequence:
>Vu_24913.1
ATGAGGAAGCCGGAACTGTGTAGTGGTAAAGACAGCAAGTTTAGAAAGGGATTGTGGTCGCCAGAAGAAGATGAGAAACTGATGAACTACATGCTGAACAATGGACAAGGTTGTTGGAGCGACGTGGCAAGAAATGCTGGCCTCCAAAGATGTGGCAAAAGTTGTCGGCTACGATGGATCAATTACCTGAGGCCTGATCTTAAGAGAGGTGCATTCTCACCCCAAGAAGAGGAACTCATCATCCACTTCCATTCCTTTCTTGGAAACAGATGGTCTCAAATAGCGGCGCGTTTGCCTGGGAGAACCGACAATGAGATAAAAAACTTTTGGAATTCAACCATAAAGAAAAGACTCAAGAACATGTCTACGACCACAGCTTCAACCTCACCAAATTCAAGTGAGACCTCGTCTGAACCAAGTAATAATAAAGACCTCAACATGGGAGGGTTTATGCCTACACAACATCATCAGCATGCAACCTTTGTGCCTGTGTTTGGTTCATCTCCAACACAATCGATGCAAACAACAGTTTTCAACACAATGATCGAAAGGTTGGATCATGAACTAAACATGCCACACGTTGGTGAATGCTTGGAAGGCACAGGGCCATGCTTTTCTCAAAATGAAGCTCACAACAAAAGTTCTTATTTAGAAAACGGAGTCTTTGGGAGTGTAAATATTGGGATTGAAGGGGATATGTTTGTTCCTCCCCTTGAGAATCTAAACACCAGCAACAATCATAACCTGAGTAGCACCTGCAAGAGTTACTTTGATGACATAAATAGTATCCTTAACAACTGCAACATTGGCATATCTGGTGAAAATAAGGAAGGAGTGGAGAATTTGTTTCAGCAAGATGCAGAATGGGACTTTGAGGAGTTGATGAAAGATGTTTCCTCCTTTCCGTTTGTTGATTTTTCATTCTGA


Promoter Sequence:
>Vu_24913::LG6:12851609-12853609(-)
ACTTTTTGAGAATAAAAAGAACAATCATAATAAATTTCTCCAGAATGAATATGTAAATGTCATCCATTTTTGTTTTTTTTTTCAAATTTAATTTCCTTTTACTGTTGAAGGAATGAGTCTATTTGGTATATCCATAATGTAATAAAAGCATAAACAAAGTAGATTTTGGTCTTCCCAATTGAAGTTTGGTTTTGCATCTTTTAGGCCCTCTTCTCTTGAGTGGATTTGAGGGAATGAATTTGAGGAGATTTGAGAAGATTTGAAGATAATTTTTTTTATCGTTTTTTTGAGCAAATTTGGAGGTAAATGAGAGTGAATTTAAAAATAATTTTTTTTAATACGTCATGTCAATACAATTCTATACTAATTCTCACAAATTTTATTTTCAAATTCATTCTCATTTACTTCCAAATTCGCTCAAAAAAACGATAAAAAAAATTATTTTCAAATCCTCTCAAATCCCCTCAAATCCATTCCCTCAAATCCACTCAAGAGAACAGGGCCTTAATTCTGCACAAATTGGCAATAGATTTTGTTGTCCTTGAATTAAAAAGATGGTTTGCGAAGTCAATATTCTGTTGCACCATTTCTTTCTTTCTTTTTCTCACATGATTCATCTTTGTTTGTAAAGAATGTGCGTGACAAAAACAGAGAAGGCTTAAAGTGTCCCACTTCCTTCAATCACAATTTAATAATATAACCACCTTTTGATTACTATTTCAGAAAGTGATTAGTCTCTTACATGTGCTTGATATCCATGTACATGTATGTAATATGCATAAATGTTAATTCACTAAATTTAATCTAAAATTTTAAGAAAATAAATTTGTGATTCTTTTTATAATTTTTAATTTTTATTCAATGTTAAATTAAGATTCACACTTAAACTTTTAACCATTTTTTTTAAGGATAAGTTTTTTCAACATTGATACATTTCCTTGGAAGAAAAGTATGTCAATTATAAACATATAAATAGTGAATTCCTTATATTGTCGTTTGACAAGGTATCTTCATTTTTTTAGAATGTTTTTCATTCTTATTTATCTGAACCGATTATCAAAACAAACTATCAAATATAGTATTATTGATGAGTCTTTCAAGAAAAAATTATTAGAGAAATACAACATTAATAAAACCTGACCTTTAATTTAAAATGTCATAACAATGAATCTATAAATTTTATTACTTACTTAATAATGTAAAACTTATAGTTACGTTTAATTTTTAACTATTCATACTAAATCAAATAACTACAAAATCAATTATGTAAATGAACGAGTAACCTTATTTTTTGGTTAGTGAAAGTGGGATTCTATACAGTTTATAATAAAGCTCCAAAGTTCTCACATAGTTTTCAGGGAAAATAATGGCTGTATATCGATAATACATCGATTTCACAGATTTGAGTCTGTTTTACCTTTTCTTTTTATATGGTTGCAACACAAGCATGTGGATATTATGCTAGAAATGAAATGAACATAATACATAAATATGCAATGGATGCATTATTGTATGGTGTTCTGGCTTTCATTCATATACATATATATCTTGAACTACACGTGTAAGGAGATTATGTGAAGTGGAAGCAAATAAGTTGGCTTGGTGATAAAACAAACTGGTATATACGTTTAACATATATTTTGTCTGGCCCCTTATGCTTGATGTGTGTGTGTGATGATAACCTTGTGAGTGAAGAAAAATTAGAAAAGAAAAAGACAAAGCCATGGAGTCAAAGACAAGACGACCACCATCTTTCTCAATGCCTTAGGTCCCTCTCCAAACCGTTTTCTACTAGACTCGTCAACCAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCACTCTTCCCTATTTTGTAAGCAAACCCTGTAACCATCACCATCATCATCATGGTCATCATTGATTGCCTCCCCATGAAGCTTCTTTCTAATCTTTCCTGCTTTATATAGCCTTTCCCTTGTGTAGATATCAGAGCAGCAGAAGA


Gene Sequence:
>Vu_24913(-)
ATGAGGAAGCCGGAACTGTGTAGTGGTAAAGACAGCAAGTTTAGAAAGGGATTGTGGTCGCCAGAAGAAGATGAGAAACTGATGAACTACATGCTGAACAATGGACAAGGTTGTTGGAGCGACGTGGCAAGAAATGCTGGCCTCCAAAGATGTGGCAAAAGTTGTCGGCTACGATGGATCAATTACCTGAGGCCTGATCTTAAGAGAGGTGCATTCTCACCCCAAGAAGAGGAACTCATCATCCACTTCCATTCCTTTCTTGGAAACAGGTTCGTCTATCTTCACCTACTTTCAGATCCATGCATCATTAACAACTGCTAATTAGACGACACTGCTGCTTTATACCAAGTAATGTTTTTTAAGGTTTTCTTTCTTTTAAGTACTCACACTACAAAGATCCATCATGTCTTTAAAGCTAAGCCATTCATTCTAACTTGAACAATAATTCTAAAATAACACTATTTTATGAGGTTTGTGTTTGTAAGTTAGCATACCAGACAATAAAAGCTTTTCTAAGATATCTTCATTTTTTTAATTGCGAAAACCTAGCTATAGTCCTACAGCAATGTTAATCAGTATAGTAGTGAAATTACTTGTACGAATTTACATGAATTCAAAACAATTCAAGAAGTTGCTTGAAGATTTCAGATAGAAAGAGTTAATAAATACCACCTCCAAATATTTGACATACCAAATTCTTGAGCATTCGGATATTAACATTTAAATTAATGTTTTCTTTTTTCTACTTTTTTAATAAATTTGCAAACCCAATTCTTGAGCATTCAGATTATATACATTTAATTAAATTAATGTTTTTAATACTTTTTTTCTCTCAGAAACAACTAAAAAAGCACGCATATAACAATTAATATATATATATAATTAAGTGGTAGTGGGTGCTTTATTTTTTATCATTGTTCTTTAACAAAAGACAAAAAGAAGAGTAAATAATATGTTTTCATGTATTATTATTCTTATTATGGTATACATACTCACATTTTAGTCTTCTTTTTTTCCCTATTTATTAATGTCTACCAATTTTCCATAATTTAAAAGGAGCTTACTTACGAATCATTACTCCGTAGAAAAAAATGTTAAGATATATCCATTTTCCTTGTATTTATTTTTTTCATTCCATTTACTTTACATATATCTCTATCTTTGTTTTGCTGGTCACAGATCACTCATTACTTTCTTTTTTCTTCATTTCTTGTTTTTTTTTTCTCCCATTATTTGCAAACCCTACATGCAAAGTGCATTGTAGGTTTATGAGGTTCGCTTCTCCATTTTTGAGTAATATTGTTTAATTAGCAAACCCTGGTTTGCAAAAGATGAAGAAAATTTAGGAAGGACCACACATATTTTGAAGTTCAAATAACAACAGCATAAATATACAAACAAACACGCCCAAAGCAAGAACTTCGATTTGAAGGCACTTCATATCTGTTTTTTTTTTATAGTTTCTTTTTGGTTTATCTGAGAAAAAGAAAAACACGCAGACATCAATTTGAGGTTACTTTTGTCTACATACGTGAATTCATTGACCTGACATATTGTAGCATGTTTCACTGTTGAAGATGGTCTCAAATAGCGGCGCGTTTGCCTGGGAGAACCGACAATGAGATAAAAAACTTTTGGAATTCAACCATAAAGAAAAGACTCAAGAACATGTCTACGACCACAGCTTCAACCTCACCAAATTCAAGTGAGACCTCGTCTGAACCAAGTAATAATAAAGACCTCAACATGGGAGGGTTTATGCCTACACAACATCATCAGCATGCAACCTTTGTGCCTGTGTTTGGTTCATCTCCAACACAATCGATGCAAACAACAGTTTTCAACACAATGATCGAAAGGTTGGATCATGAACTAAACATGCCACACGTTGGTGAATGCTTGGAAGGCACAGGGCCATGCTTTTCTCAAAATGAAGCTCACAACAAAAGTTCTTATTTAGAAAACGGAGTCTTTGGGAGTGTAAATATTGGGATTGAAGGGGATATGTTTGTTCCTCCCCTTGAGAATCTAAACACCAGCAACAATCATAACCTGAGTAGCACCTGCAAGAGTTACTTTGATGACATAAATAGTATCCTTAACAACTGCAACATTGGCATATCTGGTGAAAATAAGGAAGGAGTGGAGAATTTGTTTCAGCAAGATGCAGAATGGGACTTTGAGGAGTTGATGAAAGATGTTTCCTCCTTTCCGTTTGTTGATTTTTCATTCTGA