Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24865 LG6 12526471 12527820 PREDICTED: dof zinc finger protein DOF3.6-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 12526586 intron_variant
A/G 12526760 synonymous_variant p.Glu42Glu
T/C 12526821 missense_variant p.Ser63Pro
G/T,* 12526832 synonymous_variant p.Pro66Pro
C/T 12526834 missense_variant p.Ala67Val
C/A 12527100 synonymous_variant p.Arg156Arg
T/A 12527162 synonymous_variant p.Ala176Ala
G/C 12527250 missense_variant p.Ala206Pro
C/A 12527337 missense_variant p.Pro235Thr
T/A 12527388 missense_variant p.Ser252Thr
G/A 12527450 synonymous_variant p.Ser272Ser
G/C 12527554 intron_variant
G/A 12527697 intron_variant
G/T 12527766 missense_variant p.Gly310Val
G/A 12527775 missense_variant p.Arg313His
T/A 12527776 synonymous_variant p.Arg313Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24865.1
MVFSSIPVYLDPPNWQQQQNQHQANGSNSPQMLPTMPQHPQEPHVGVHEAAGSIRPGLMADRSKIPAQEGALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPVPTEKSSLPNPTNAMPELIGRFPQPFMASLQSMNRYGAGNAGVNLREMQAQNGSHMGFQIGGQGHGSSVTAAGGGLEQWRFQQFPFLNGFDSASAVSSYPFQTESVEGLVGDIAASSRVTQLPPRVKLEYNGGLNLSRSPLSVSENSNHYYSWTDLSGLASSSASHLFSRMAALRVPPSSRVSVNRNQAGRI*


CDS Sequence:
>Vu_24865.1
ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAACAACAAAATCAACATCAGGCAAATGGCAGTAACAGTCCTCAGATGCTTCCCACCATGCCTCAACACCCACAGGAACCTCACGTCGGAGTTCATGAAGCTGCAGGCTCAATCCGGCCCGGTTTGATGGCGGATCGGTCTAAGATTCCGGCCCAGGAAGGAGCTCTCAAGTGTCCTCGCTGTGAATCCACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCGCGGCACTTTTGCAAGACTTGTAGGCGTTATTGGACAAGAGGTGGCGCTCTCAGGAACGTTCCTGTCGGTGGAGGATGCCGTAGGAACAAGAAGAACAAAAGGAGTCGCTCCAAATCTCCGGTTCCTACTGAGAAATCATCACTTCCCAATCCCACAAACGCTATGCCTGAGCTTATTGGTCGATTCCCACAACCTTTCATGGCCTCTCTTCAGAGTATGAACCGCTATGGTGCAGGGAACGCTGGTGTTAACTTGCGTGAGATGCAAGCTCAGAACGGTTCGCATATGGGGTTTCAAATTGGTGGTCAGGGTCATGGTTCAAGTGTTACTGCTGCTGGAGGAGGATTGGAACAGTGGCGGTTTCAGCAATTTCCTTTCTTGAATGGTTTTGACTCAGCTTCTGCTGTTTCTTCCTACCCTTTTCAAACTGAAAGTGTTGAAGGTCTGGTTGGAGATATTGCCGCAAGTTCTAGGGTTACTCAGCTGCCACCACGAGTTAAATTGGAATACAACGGTGGTTTGAATTTGTCGAGATCTCCTTTGAGTGTGTCAGAAAATAGTAACCATTACTACTCATGGACGGATTTATCCGGTCTTGCATCTTCTTCCGCTAGTCATCTCTTTTCTAGGATGGCAGCACTCCGGGTTCCACCGTCTTCACGCGTCAGTGTTAACAGAAATCAGGCTGGTAGAATTTAG


Promoter Sequence:
>Vu_24865::LG6:12524471-12526471(+)
TAATTAAACAATAATCTTCCAAATTAGTTCTCAGCTGGTCATTCTAACATGTCATTATAACACTCAATGACATGAATAGAAATCATCATCTTCTAATTTCTATATCAGAAAAAAAAACCTTGGAGCTGGAAAAAAAACATTTATTATAAGAAATTCCAATAAATTAGACCAAAAGTTGTGAACATGTGGGCATTCACAATATATATATATATATATATCCTTTACTTTTAAGAAGTAGACAAAATGTTGTTGTGGCTCAAATTTTAGTGCCCTTAAGACATAAAATTTGTGACGTTGAATTAATAAATTTGGCATGTTTTTTCTTTGAGGAATATCTGAATTGTTTACTTTGTCTTTTATCAGTAGTTTATAGCTTACTGAGTGATGTCACTGGTGTTGGTGCTGTGCCCAAAAAGGATCTAACCACAACTTTAAGCCACTGCTTTACTGGGCCTAAGTATGAAAAAAGTAAAGCAATTACAGGCTAGCTAGTGCCAATTACTTTATATTTTAGGGTTTTGCTTTGCAACTCTTTTTTTTTTTCAATCTGCATTTTCCCTCTCAATTACCACTTTACTGGTTTTCTTTAATTATTGTTCCTTGGACCACAATCTTTGCAAATCACGATTTTTCTGTCAATTGATCAAATCTTTGTGGTAGTGTGTGAAATTGATTTCATAAACTTAAACATGACGAATGCTCTTACACTGTCTGTGTTTACACCTTTGTGCATTTTACTCTTAAACATGTTCCAAAAGGTAATTGGAACAGACAACTATGGATAAAACAAGAGGAAAAAAAAGCTTCAAGTTAGAAGTTTGAAAGATAACTTAATATATACCAGTGCTTCATGACATTCACATATTATATATTTTTTGTTACACTACCTTTTAACTTTTTGAAATTAAAAAAAAAAATACACTGCAATTTTATTGTTAGTTCTTGATTTTGAATGAAAAAATATTGAGAAAATGATGTTGTTCTATATTTCATCTTTATCTTATGAACCTGATATAATGGTGAAATTACTATTTTAATAATAATTTGAAGGTCGCAAATCTTAAAACTGTCGATTTTTTGGTTGGGAATGAAAGACACCATCATTATTTATGGTTAATACGTGTTTATGAATTTCGGATTATTATGGTTAATCACTGTGCTGTGAAAGAGGAAGAAGTCAAAAAGTACTGCAACATGTGTACGAGATTATTACTATTCTTGCATGATTAAGAATTATTCATCTTTCGACATTTTTACAATTTTAATAGTCTGTATAATTCATTTTTCTTTTGTTATGTAGACTTTAATAATTGGTTTCAAATTTAATTTGTTAATCTATACAAAAGATAACAGCATGTATATAAATTTCCATTCTTATAGTAGTAATATATAACTTTTATTTGTTTTTTTTAGTGGGGGCCAATTTTAAAATTAAATAACATAAAGGGAAAAACTGGAAACAAGTTACTGCAAATTACTTTTACCTTTGTGTTGTGAACTTTATAGAGAATTATGCAGCAGAAGAAACTGGTGTAATATTGAGCAGTAAGTTGAAGGTTCTTAGAAGCAACGACTAGTATTGAATAGAATGAGAAATAGCATTGAATTTTGAGAAGAGTATGATATATATTATTATACGGCGTGGTGTTTTCATGCATGGGAGCCACCATGGCTTTTCTACGAACAAAAATTGAGAGGAAGAACGCGTGAAAAAGAAGCTTACAGGTTAAGATAGTTGCTCCACTTAAAACCCTAAAATATAATAAAACAAAAAGAGATGAGAATGGGAGAATAAGCGCAAAGCAAACAAAGTAAAGCCTCTTCTTGCTTTCCTCTCCTCCATCCTCTTCTTTTTCTCTTACTTTCTTGCCTCTGCTATTCCCTCTACCTAGTGCGATTCTACCTCCACCTTCTCCCTAAAGACCCATCAAACTTTATAAAAAAGAAACAAAAAAAAAAAAAACAAACACTCTCACACACACAAAAGGATCGAAGCACCA


Gene Sequence:
>Vu_24865(+)
ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAAGTAAGGTTTCAATTCCCTCAAATCTCAGCCACAGTTTTCTAAACCCTAAAACCAAATCACAAAAAGATAAATCGTTAATATTCCTATTCCTTCTTTGCAATCTAATCTTCCTGAATATACCAGATTTTTTTTCATACTATTTCTCTCTTTCTTTTGCTCTGCAGCAACAAAATCAACATCAGGCAAATGGCAGTAACAGTCCTCAGATGCTTCCCACCATGCCTCAACACCCACAGGAACCTCACGTCGGAGTTCATGAAGCTGCAGGCTCAATCCGGCCCGGTTTGATGGCGGATCGGTCTAAGATTCCGGCCCAGGAAGGAGCTCTCAAGTGTCCTCGCTGTGAATCCACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCGCGGCACTTTTGCAAGACTTGTAGGCGTTATTGGACAAGAGGTGGCGCTCTCAGGAACGTTCCTGTCGGTGGAGGATGCCGTAGGAACAAGAAGAACAAAAGGAGTCGCTCCAAATCTCCGGTTCCTACTGAGAAATCATCACTTCCCAATCCCACAAACGCTATGCCTGAGCTTATTGGTCGATTCCCACAACCTTTCATGGCCTCTCTTCAGAGTATGAACCGCTATGGTGCAGGGAACGCTGGTGTTAACTTGCGTGAGATGCAAGCTCAGAACGGTTCGCATATGGGGTTTCAAATTGGTGGTCAGGGTCATGGTTCAAGTGTTACTGCTGCTGGAGGAGGATTGGAACAGTGGCGGTTTCAGCAATTTCCTTTCTTGAATGGTTTTGACTCAGCTTCTGCTGTTTCTTCCTACCCTTTTCAAACTGAAAGTGTTGAAGGTCTGGTTGGAGATATTGCCGCAAGTTCTAGGGTTACTCAGCTGCCACCACGAGTTAAATTGGAATACAACGGTGGTTTGAATTTGTCGAGATCTCCTTTGAGTGTGTCAGAAAATAGTAACCATTACTACTCATGGACGGATTTATCCGGTCTTGCATCTTCTTCCGCTAGTCATCTCTTGTAACTTTGATGGGTTAGAGAAAAGAGAAATTCTACGGTAGACACAGAAATGTAAGGGTTTTGGTACTGTTATTTTTTTTTATCAATAGTTGAATGAGTTTCCATCTAATCAAGTCACTCTCTCTGCTGACATGATTGAACTCGTTTAGTTATTGATCCAAAAAATAACTGTACCATTAAACTCTTACATTTTTTATATCAGTTCTAGGATGGCAGCACTCCGGGTTCCACCGTCTTCACGCGTCAGTGTTAACAGAAATCAGGCTGGTAGAATTTAG