Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24784 LG6 11678042 11680627 PREDICTED: serine/threonine-protein kinase CDL1-like isoform X2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 11678397 upstream_gene_variant
G/T 11678440 upstream_gene_variant
T/A 11678729 upstream_gene_variant
C/T 11678785 upstream_gene_variant
T/C 11678989 missense_variant p.Trp109Arg
C/T 11679040 missense_variant p.His126Tyr
G/T 11679132 upstream_gene_variant
C/G 11679134 upstream_gene_variant
T/C 11679278 missense_variant p.Phe174Leu
G/A 11679489 upstream_gene_variant
A/C 11679499 upstream_gene_variant
A/G 11679576 missense_variant p.Ile240Met
A/T 11679584 missense_variant p.Tyr243Phe
G/T 11679715 upstream_gene_variant
G/T 11679734 upstream_gene_variant
C/T 11679735 upstream_gene_variant
T/A 11679761 missense_variant p.Cys272Ser
C/A 11680035 stop_gained p.Ser335*
G/A 11680036 synonymous_variant p.Ser335Ser
A/T 11680163 splice_region_variant&intron_variant
G/T 11680168 splice_region_variant&intron_variant
G/A 11680169 splice_acceptor_variant&intron_variant
A/G 11680269 synonymous_variant p.Thr382Thr
C/T 11680381 upstream_gene_variant
G/A 11680507 synonymous_variant p.Arg432Arg
A/G 11680576 synonymous_variant p.Gln455Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24784.1
MFTMRLLWGLRLPLLIILIHLLFPNRSTYKFHAEALITFKGSLGGPQQLGCSIVKYPCQMQWPCLDCYKLKDPGGVTTKIDGNNDIPTLTPLPETQDRKPGGRRSSAVIGSVIAAIVVVVILVTVYICLMRVKKSMRQTSEVASSMPSPTVEMGRVNTQHVTAFSPQNTRQLTILELEQATQNFSRNNIIGEGGFGVVYKGLLQDGSIVAIKRRLFSLTKDFFLNVKQIAHIHHIHLVKLIGYYEDSHQQLLVYEYLPNGNVGSHLYDSEGLPVGRLNLWRRLSIALGASKGVEHLHSLVPPLVHTNLRTSNVLLDENFTAKVSDYGFCKLQTQVDRAGSSSNVDCFLDPELSFPQNFSEKSDVYSFGVFLLELICGCEAHNKNMLHPDENIAFQVKNSVDLDKFVDMTLGYKEKHGARRILMLALQCVDATRRRPSMAQIVLELERIQREIAPMYPQFNDEIGAVTLGSELFQ*


CDS Sequence:
>Vu_24784.1
ATGTTTACAATGCGATTGCTATGGGGGTTAAGGCTGCCTCTACTCATAATACTGATTCATCTTTTATTTCCCAACAGATCAACCTACAAATTCCACGCTGAGGCTTTGATCACTTTCAAGGGTTCGCTTGGAGGTCCACAGCAATTAGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACTAAAAGATCCAGGTGGAGTAACAACAAAGATAGATGGGAATAATGACATTCCAACACTTACACCTCTTCCAGAAACTCAAGACAGAAAACCAGGTGGAAGAAGGAGTTCTGCCGTAATTGGTAGCGTTATTGCTGCCATAGTTGTCGTTGTAATCCTGGTGACTGTCTACATCTGCTTGATGCGTGTTAAAAAATCTATGAGGCAAACATCTGAGGTTGCTTCTTCTATGCCATCTCCCACCGTTGAGATGGGAAGAGTCAACACGCAGCATGTCACTGCTTTCTCTCCACAAAACACAAGGCAGTTAACAATTTTGGAACTGGAACAAGCAACACAGAATTTCAGTCGTAATAATATCATTGGTGAAGGTGGATTTGGTGTTGTGTACAAGGGCTTGCTTCAAGATGGTTCTATTGTGGCCATAAAAAGGCGTCTATTTTCTCTGACAAAAGATTTCTTCCTAAATGTGAAACAGATAGCTCATATTCACCACATCCACCTGGTCAAGCTCATAGGATATTATGAAGATAGCCATCAACAATTACTTGTATATGAATATCTCCCTAACGGCAATGTAGGGAGTCACCTATATGACAGTGAAGGTTTACCTGTTGGAAGGTTAAACTTGTGGCGAAGGTTGTCTATTGCTTTAGGCGCATCCAAAGGAGTGGAACATCTTCACAGTTTGGTTCCTCCTTTGGTTCACACAAACCTTAGAACTAGCAATGTTCTGTTAGATGAAAATTTTACTGCCAAGGTTTCTGATTATGGATTCTGCAAACTGCAAACACAAGTTGATCGGGCAGGCTCGTCTTCAAATGTAGACTGTTTTCTTGACCCAGAGTTGAGCTTTCCGCAAAACTTTTCGGAGAAGAGTGATGTATACAGCTTCGGGGTGTTCTTGCTAGAGTTGATTTGTGGCTGTGAAGCACATAACAAAAACATGTTACACCCAGATGAAAATATAGCATTTCAGGTAAAAAATAGTGTTGACTTGGACAAATTTGTTGACATGACACTGGGATACAAAGAAAAACATGGTGCTAGACGAATTTTGATGTTGGCATTGCAGTGTGTGGATGCTACTCGCAGAAGGCCATCAATGGCGCAAATTGTGCTAGAGCTGGAGCGGATTCAAAGAGAAATTGCTCCCATGTATCCTCAATTCAACGATGAGATTGGTGCCGTGACTCTTGGGAGTGAGCTCTTTCAATGA


Promoter Sequence:
>Vu_24784::LG6:11676042-11678042(+)
CAGACCACTCCGTTCAATCCAAAAGTCCCATGGTCCTTTCGTTTTAGGATCAAGGATGTTCCTTTCCCTCTTCTGTCTCCATCCTTTCTTCTCAACCATCATTTTAATACAACAACACCATGCACACCTATTCCCATGTTATTGGACACACCACCACCTTCATTCTCACCTTAATAACCAACACTCACACCAAAACCAAAACCAGATTAATCAAAGTGGAAACTTTGCATTTCCTGTTTTTCTTAACTTACTCTCTATCTTAACTGTTTAAGCTACAACCTAAGGTTTACTAGCTTCAGGGCACTTCCCAAGGGCACGTGAAACAAGGTAGAAATTCAAAGTTCTTATTCTCAACTGGTCATGATTCAGGATTGATATAATGAGTTGTGTGAACGAACCATAAATGAATAAGATTGTCTGCACCATTTCTAGTGGCTGCTATCTGGGAAGTGGGAACCCTTTTCCTAATTTTCTCCAATGCTAATGCGTAAGCAAAGCACTCAATGTGGTCTTCTGTGGGATCTATAGATATTAGGAATAAGAATTTTGCTTTGTGACACAAAATAAATAAAAGGGTATAGACAAAATTAAAAGAAAAACAGAAAACAGCTATTAGGATTAGGCCCTCTGCAACACTAGAAGAGCCTGTACTGCATTGATGAACAGATTCTCTCCCTGTTTGTTTGTCTCCTCTTACTGTTTCTGTTATGCAATGAGTCCTGTAAATGGTGACCCTTTCTTTGTCTTGGGATTATATCTCTCAACTCAGTTCTAGACCCAACCTGAATTATCATCACAATTTGACACTTTCTAGTTGTACTGTACTTGCTTTAGCCTCAACTCTTTCTAGAGATCTAAAATTCCACGAGCTTTTCCTGACAAAGATCATGTTTTTGGCTTTTGTAGTTTACCTTCCTAAGAATCACCACTTTATGCTTTTACCATGGTCCACACTCACCACATTGTTCTCCTCTCATTGCACTTTGCAGTATGAACAATGCTGTTCTGCTGTTAAAAAACAAAGTAAGATCCTGATTTTGCTTTTGCAAAACTGTTTACGCTTTGCTGAATCAGTGAATATAATTTCAATTCCTTGCAGGTAATTGAGGATGTGCCTGGAAAATAATTCTGAAAACCAGTTTGGTATAGAGGTAAATGATGTTTGGGTAGCTGAAAATACTGTCTTGTTTCACCAGCTCTTGAAAAACTCTTGGCTCTTAGTCCAGGTTTTGAGATTCCTTGGGAATATTTTGGGATTTGGAACTCCATTTCCCTGCTATGGAAATTTATGGGCGTAACAATGTTCAATAGAAAGCAGCAATTCCACCTGTCCATTTGAATGAAGACAACCTGTTTAAAGCGTTTTCCAGCTTTTCTTGTGGCCTTTCTTAGCTGTATAGTATAGTTATAGTCAACCAAGACCACTGCTTGGATTTTTGGGAAGCTAATGCTATAGACTAGAGTCTTACACTAACCTTCCCTTTTCAATAACTTTTACAATTATTTCTACTACTTCCAGATCTCCTTGGTAAATATGTAACTTACTCTAGAAGCATGCAAAGTGTGAATTCAATTCTTTTCCCCTCAATTTTGACCGCTATATAAATCAGTTTGCTGTGTCTATAATATATTCCCATTATGGCAGTTCATTACACTTCTTGGTATGTTCACTTTTCACTCGTGAACTTTGTCCCTCGTGCTATTTCTGGTTAGCTAATCCACTTCCTTTGTCACTTTGGATCTTGGTTTACATTGTGGTATCTCCATTATTTCATGCTAGTTTTTCAGTGGAATTTGACTGATACTTATGAATATGAGCATACTTTACTATGTTTTTTCATGAGATTATGGGGTGAGATTTTCTTCTTAACATTTAATGACTGTGTTTTGAAACTGTGTAGGGGTGGGCTAGGAAGGTCTCAGAGGCGAGTTTGATGTCTTTGCTTCTCAAATCAAGAAGCAGAAACTGAGAATTCATAAGGACGTCCTTGGGTGATGCA


Gene Sequence:
>Vu_24784(+)
ATGTTTACAATGCGATTGCTATGGGGGTTAAGGCTGCCTCTACTCATAATACTGATTCATCTTTTATTTCCCAACAGATCAACCTACAAATTCCACGGTACGGTTTTCTTGTTTTTTGTTTTTATATAACATTCTTGAAAAAGTTTTCTGTATCAAAAAGTTTCAGGGGACTTCAGATTGAAAAAGAGTAAATTTTCCATGAATGTAGTTCTTGATTCACTGAATTCCAAGTGCTGCTGGCTTGATATTTCTATTTGCACGTTATGAATGTACCTACCTGCTACATACGATCAATGTTTCCTTTTTCACATGGAAGTACACAAGGTCCATCATGTCACATATCAATAGTTTAAGAAGACATAGAATGTGGGAGAGGCAATGATTGAGCTTGTTGCAGTGACTGAATTATACACTTGATGATTGCAGCTGAGGCTTTGATCACTTTCAAGGGTTCGCTTGGAGGTCCACAGCAATTAGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACTAAAAGATCCAGGTGCTTTTTTCTCAAATTCTCTGTAAGCTCCTTCTCTCCGTCTCTCTGAATTTTTGAGAGTAGCCATTGATTGATAAAACTGAGTCAAACATTGAGATTCACTCCAGAATTTAATTGATGAGGATATAGGAGTGATTTTTTATCCACACTTTTTTTCAATTTTGGTAACATAAAGTTTTGGGATATTAAACCTCCACATATAAAAAATTTCACTTTTCACTTCAAATGTTTTCCTTGAAAACCTCAGCTCAATCATAAGAGTTGTAAGAAAAACTCTCCACTTGAGAAACAGGTGGAGTAACAACAAAGATAGATGGGAATAATGACATTCCAACACTTACACCTCTTCCAGAAACTCAAGACAGAAAACCAGGTGGAAGAAGGAGTTCTGCCGTAATTGGTAGCGTTATTGCTGCCATAGTTGTCGTTGTAATCCTGGTGACTGTCTACATCTGCTTGATGCGTGTTAAAAAATCTATGAGGCAAACATCTGAGGTTGCTTCTTCTATGCCATCTCCCACCGGTTAGTTCATTTCATCTCGTCAATGAATTGATAAAATTAACTACTCAGTGTTGTGATTCATTTTGTTAGAATAACATGACATTATCTTTTACAGTTGAGATGGGAAGAGTCAACACGCAGCATGTCACTGCTTTCTCTCCACAAAACACAAGGCAGTTAACAATTTTGGAACTGGAACAAGCAACACAGAATTTCAGTCGTAATAATATCATTGGTGAAGGTGGATTTGGTGTTGTGTACAAGGGCTTGCTTCAAGATGGTTCTATTGTGGCCATAAAAAGGCGTCTATTTTCTCTGACAAAAGATTTCTTCCTAAATGTAATCAAATATCTCTTTTTTTGTTCTGATATATTGCCACATAAGAAGGTTTAGAAGGCCTTTACCAAGTATTTTGATTTCTTTCAACGGATAGCAGGTGAAACAGATAGCTCATATTCACCACATCCACCTGGTCAAGCTCATAGGATATTATGAAGATAGCCATCAACAATTACTTGTATATGAATATCTCCCTAACGGCAATGTAGGGAGTCACCTATATGGTAATCTTCCCCCTCCATGTTTACGTGAGATTTGTTGCATCTTGAGTTGTGTATTTTATGCTTCGTGCTTCTGTTTATGCAATATGCAGACAGTGAAGGTTTACCTGTTGGAAGGTTAAACTTGTGGCGAAGGTTGTCTATTGCTTTAGGCGCATCCAAAGGTAAACCAATTTTGGCTACGCTTTTTATTATCTTGTTTCTTTTGGAATTCAAAACTCACTCAGTTCAGTCTTACTTTGTATCAGGAGTGGAACATCTTCACAGTTTGGTTCCTCCTTTGGTTCACACAAACCTTAGAACTAGCAATGTTCTGTTAGATGAAAATTTTACTGCCAAGGTTTCTGATTATGGATTCTGCAAACTGCAAACACAAGTTGATCGGGCAGGCTCGTCTTCAAATGTAGACTGTTTTCTTGACCCAGAGTACGCTAAAACTTCAAATGTAGAATCTGAACAATTTTAACTTTCCTTGTTGATTGAAACTAAACGAGTTTTTAATTTCCATGAACAAAGGTTGAGCTTTCCGCAAAACTTTTCGGAGAAGAGTGATGTATACAGCTTCGGGGTGTTCTTGCTAGAGTTGATTTGTGGCTGTGAAGCACATAACAAAAACATGTTACACCCAGATGAAAATATAGCATTTCAGGTATATCTATGCTTCCAAACTTGATGGATCTTGTTCTTGGACTTTCCAACTCAGGCTTACTAATCCCAACTTTAACAAACTTGAAGGTAAAAAATAGTGTTGACTTGGACAAATTTGTTGACATGACACTGGGATACAAAGAAAAACATGGTGCTAGACGAATTTTGATGTTGGCATTGCAGTGTGTGGATGCTACTCGCAGAAGGCCATCAATGGCGCAAATTGTGCTAGAGCTGGAGCGGATTCAAAGAGAAATTGCTCCCATGTATCCTCAATTCAACGATGAGATTGGTGCCGTGACTCTTGGGAGTGAGCTCTTTCAATGA