Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24606 LG6 9695243 9697116 PREDICTED: nodulation-signaling pathway 2 protein-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 9695284 missense_variant&splice_region_variant p.Asn478Lys
A/G 9696051 synonymous_variant p.Leu356Leu
T/G 9696107 missense_variant p.His337Pro
C/G 9696420 missense_variant p.Val233Leu
G/A 9696434 missense_variant p.Ala228Val
A/G 9696446 missense_variant p.Leu224Pro
G/C 9696460 synonymous_variant p.Ala219Ala
G/T 9696511 missense_variant p.Phe202Leu
G/T 9696738 missense_variant p.Arg127Ser
T/G 9696883 missense_variant p.Gln78His
G/T 9696988 synonymous_variant p.Pro43Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24606.1
MEIDINTDIDAIHNLHFSGYTTITDTTPSSDDDYGCNWNHWSPLVNWDAFTGSHDDFHHLIDSIVSDGPAEYPSPEDQAASNSPSASITEEDDAEEETAAADDSKGLRLVHLLMAAAEALTGATKSRDLARVILVRLRDLVSHASHGSNMERLAAYFTDALQGLLEGAGGAHNNSKHHYYITCGSHHPRDDHHHQNDTLAAFQLLQDISPYVKFGHFTANQAILEAVAHERRVHIVDYDIMEGVQWASLMQALASDKTGPPGPHLRITALSRTGTGRRSIASVQETGRRLTAFAASLVQPFTFHQCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPDSIASFLSGAKELKPRLVTLVEEEVGSSVGGFVGRFMDSLHHYSAVFDSLEAGFPMQGRARALVERIFLGPRIVGSLARIYRTGEALEERRSWGEWLGAAGFRGVPMSFVNHCQAKLLLGLFNDGYRVEELGTNKLGQSYYNIIVKNI*


CDS Sequence:
>Vu_24606.1
ATGGAAATAGACATTAACACAGACATCGATGCAATCCACAACCTCCACTTCTCCGGATACACTACCATCACCGACACCACCCCCTCTTCTGACGACGACTACGGTTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGATCCCACGATGACTTCCACCACCTCATCGACTCTATCGTCTCCGACGGTCCCGCCGAGTACCCCAGCCCCGAAGACCAAGCCGCCAGTAACTCCCCCTCCGCCTCCATAACCGAGGAAGATGACGCCGAGGAAGAAACGGCTGCCGCCGACGATTCCAAGGGCCTAAGACTGGTCCATCTGCTCATGGCCGCCGCGGAGGCCCTCACCGGCGCCACCAAGAGTCGTGACCTGGCTCGAGTGATATTGGTTCGGCTCAGGGATTTGGTGTCCCACGCCTCGCACGGCTCCAACATGGAGAGACTCGCCGCCTACTTCACCGACGCACTCCAGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATAACAGCAAACATCACTACTATATCACATGTGGGTCCCACCACCCCCGCGACGATCATCATCATCAAAACGACACCCTCGCGGCCTTCCAACTGCTCCAGGACATATCTCCCTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAGGGCGTCCAGTGGGCTTCTCTCATGCAGGCCCTTGCCTCCGACAAAACAGGTCCCCCGGGCCCACACCTTCGAATCACAGCATTGTCCAGAACCGGCACCGGACGCCGCTCCATCGCCAGCGTGCAGGAGACCGGGAGGCGGTTGACGGCGTTTGCCGCATCCCTTGTGCAGCCGTTCACGTTCCACCAGTGCAGGTTGGATCCCGACGAAACGTTTAAACCTTCCTCTCTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGTATGTTAAACTTGCCGCACCTGAGTTACCGCGCGCCCGATTCGATTGCGTCGTTTTTGAGTGGAGCGAAAGAGTTGAAGCCGAGGCTGGTGACTTTGGTGGAGGAAGAGGTGGGGTCCAGTGTGGGAGGGTTCGTGGGAAGGTTCATGGACTCGCTGCATCACTACTCGGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGGGCCAGGGCCCTTGTAGAGCGGATTTTCTTAGGCCCAAGGATAGTTGGCTCGCTGGCCCGGATATATCGGACGGGTGAAGCGCTGGAGGAGAGAAGGTCATGGGGGGAGTGGTTGGGTGCGGCAGGGTTCAGGGGAGTCCCGATGAGCTTCGTCAATCATTGCCAAGCGAAGCTTCTACTGGGTCTTTTCAACGACGGATATCGGGTGGAGGAGTTGGGGACTAATAAGCTAGGACAATCATATTACAATATTATAGTCAAAAACATTTAA


Promoter Sequence:
>Vu_24606::LG6:9697116-9699116(-)
TTTTAATTCCAATGATACCTTTCACAGAGAAACCGTATTTTGAACTGCGGCAACTTCCTCCTGCATCTCCAAAACATATTTTAATTCCAATGATACCCTTCACAGAGAAACCGCAATTCGATCTGCGGAAAGCACAAACCCACCAGCGCAGTTCAAAATGCGTAAAGCACGGAGATCCCACCGCATTTCGATCTGCGGCTGAGACAAACCGCACTTCGAAGTGCGTTAGATTTTTAGGGTTTAGTTTTTTAATTTTTTTATTAGGTTAGTGTATATTTATTTTATTAGGTTTTATTTTTATTAGGTTAGTATAATAAATTTAATTTTTTATGTTAGTTGTTAAATAAAATGTTTTGTTTTAATATATTTTGAATTATTTTATTTGTTTGTTAAATTTTGTTGAATTTGTTATTTTTCAACATATTATTATTTTCTTAATATATTATTTATTATGTATTTAATTTTATTTAACTTTTTTAATTTTTTATGAAATTAAAATAATTATTAAATTGTTTATTGAATTAAATAATAATTATTATATGTAATGTTAAATATTATTTTGAATTTAAAGTGCAACAATTAATTAAAACGCACTTCGAAGTGCGATTAGGAAACAATTAAATAGATAGGAAACGCACTTCGAAGTGCGGTTAGGAAAGAAACAATTAACAATTAAATAGATAGGAAACGCACTTCGAAGTGCGGTTAGGAAAGAAACAATTAATTAAAATAGGAAACGCACTTCGAAGTGCGGTTAGAAAAAAATTAATTAAAACGTACTTCGAAGTACGGTATTAATTTTTGATTTTTTGTTAATAAAAGGTAAAGAAGTAAAATTGGAGGTGCAGGATGAAGGCAGTGAGGTGTAGGAAGAATCACTCTTAAATAAAAAGTAATTCTACATCAAATTAACTTGGCTCGTCACGTTTATTGGCGGCAGCATCGATTATTGCAACTGGGAATAACGCAATGAAAGAGCTCTAGGCATGGGTGGGATCATTTATTTAAAAACCCTAAACGAGGAGTTATGTCACTGAATACGTTATCGAAAGTATATGTGTGTGCCCTTAAAGGTAGACACTCCATAGCCCTTCGTATATTTAGAAGTTTATCTCGGTAATGAAAATTGTGTGCCCTCCTATATTCTAATTGAGCTCTGTGGAGACTTTTTGAACTTCAACCAATGGCAGAGGAGAAGACATTCCCCCCAAGTGCTGACGTGGGATGAAGATGGTCTCGGCCAATGAGAGAGCGACACTTCAAGATGACGTGGCTAGGCCACTGAGATAGGCTCGAGAGAGTTTTCAAATTTTTTTAACATTTTTCCTTTGAGATACCACTATGAGATATTGAGGCCTATATGTCTTTTTCCTTATGCATCGTATGAGGTTAAAATTAAACTTTTGAACAAAACTTAGCTTTCGTGTTGATGATTTCTATATCATGTTTATGAGGACACAAACGTATTTCATCCAAATAACTTCATCAAAATCTGTAAATATGAATAAAAAATTTAACAAATTATATTAAAAGCATAAGTAATTATATCTTTGTATATAACGCAATATTCAACTATAAATTTTTTTTGAAGATGTATTTTTTTTATAAATTAATTCTTGATTTCTTTGATTGGTAAGGAGGGAATTGCAAGATAAGTAGAAACAGAAGGAAGGGGTTATGAGTAAATTAAAAGTTAAAAAGTTGTATAAATCCATAAAAAACGGCACTAGTAATGATGAAGAATAGGTAATATTTTATTGAAATTGAAAGAAACATAAACTGGGCAGTCATCGGCCGCAAAACTCTGTAGTCACCCATCAATTTTTGGACTTCTACTGTCGCATGCTCCAGACCCTTCTTCCCTTCTTCCATCCTCAACCCCTTTATAAATCTCCCACCCCACCCCACACAACACAACACCATTTCTACATCTACCCACACCTTCTTGCTATTCTCTCTTCTTTTCTCCCCACCCACCAACATACTCAACTCCAACAACC


Gene Sequence:
>Vu_24606(-)
ATGGAAATAGACATTAACACAGACATCGATGCAATCCACAACCTCCACTTCTCCGGATACACTACCATCACCGACACCACCCCCTCTTCTGACGACGACTACGGTTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGATCCCACGATGACTTCCACCACCTCATCGACTCTATCGTCTCCGACGGTCCCGCCGAGTACCCCAGCCCCGAAGACCAAGCCGCCAGTAACTCCCCCTCCGCCTCCATAACCGAGGAAGATGACGCCGAGGAAGAAACGGCTGCCGCCGACGATTCCAAGGGCCTAAGACTGGTCCATCTGCTCATGGCCGCCGCGGAGGCCCTCACCGGCGCCACCAAGAGTCGTGACCTGGCTCGAGTGATATTGGTTCGGCTCAGGGATTTGGTGTCCCACGCCTCGCACGGCTCCAACATGGAGAGACTCGCCGCCTACTTCACCGACGCACTCCAGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATAACAGCAAACATCACTACTATATCACATGTGGGTCCCACCACCCCCGCGACGATCATCATCATCAAAACGACACCCTCGCGGCCTTCCAACTGCTCCAGGACATATCTCCCTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAGGGCGTCCAGTGGGCTTCTCTCATGCAGGCCCTTGCCTCCGACAAAACAGGTCCCCCGGGCCCACACCTTCGAATCACAGCATTGTCCAGAACCGGCACCGGACGCCGCTCCATCGCCAGCGTGCAGGAGACCGGGAGGCGGTTGACGGCGTTTGCCGCATCCCTTGTGCAGCCGTTCACGTTCCACCAGTGCAGGTTGGATCCCGACGAAACGTTTAAACCTTCCTCTCTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGTATGTTAAACTTGCCGCACCTGAGTTACCGCGCGCCCGATTCGATTGCGTCGTTTTTGAGTGGAGCGAAAGAGTTGAAGCCGAGGCTGGTGACTTTGGTGGAGGAAGAGGTGGGGTCCAGTGTGGGAGGGTTCGTGGGAAGGTTCATGGACTCGCTGCATCACTACTCGGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGGGCCAGGGCCCTTGTAGAGCGGATTTTCTTAGGCCCAAGGATAGTTGGCTCGCTGGCCCGGATATATCGGACGGGTGAAGCGCTGGAGGAGAGAAGGTCATGGGGGGAGTGGTTGGGTGCGGCAGGGTTCAGGGGAGTCCCGATGAGCTTCGTCAATCATTGCCAAGCGAAGCTTCTACTGGGTCTTTTCAACGACGGATATCGGGTGGAGGAGTTGGGGACTAATAAGTTGGTGTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCCTCCCTTTGGACTTCTTCTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTCTTTTTCCTCAGACTCCCATTAATTTATTTCTTCCTACGAATTAAGCTAATTATTTCATATATGAGGCTCTCTTTCGATAGTTACCAGTCATACAGGAATGAGTAAAAACATCAATTATTCGCATGACGCAACTTTTCATCTCCTTTGTGATACCAACTTACTCAACATGCAACAAACTCATCACAACTTCCAAACATATATTATATTTCCAACCTTAAAAACAACACATTCTCTATCTCTTCTTTAATCTACTTTTTCAAATTTAATCTGTTTGGTATACTGGACTTGATTTTTCAATTCAGGCTAGGACAATCATATTACAATATTATAGTCAAAAACATTTAA