Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24514 LG6 8561183 8563706 PREDICTED: transcription repressor MYB6-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/G 8561423 missense_variant p.Glu255Gln
C/G 8561473 missense_variant p.Ser238Thr
G/A 8561510 missense_variant p.Pro226Ser
T/A 8561534 stop_gained p.Arg218*
A/G 8561539 missense_variant p.Phe216Ser
T/A 8561931 upstream_gene_variant
A/T 8561932 upstream_gene_variant
T/A 8562070 upstream_gene_variant
C/A 8562077 upstream_gene_variant
T/C 8562128 upstream_gene_variant
C/T 8562132 upstream_gene_variant
C/T 8562467 upstream_gene_variant
T/A 8562760 upstream_gene_variant
T/A 8562763 upstream_gene_variant
A/T 8562850 upstream_gene_variant
T/C,* 8562856 upstream_gene_variant
G/A 8562897 upstream_gene_variant
T/C 8562898 upstream_gene_variant
C/T 8563016 upstream_gene_variant
G/C 8563150 upstream_gene_variant
T/C 8563265 upstream_gene_variant
C/T 8563275 upstream_gene_variant
A/C 8563300 upstream_gene_variant
C/T 8563305 upstream_gene_variant
T/A 8563317 upstream_gene_variant
G/A 8563318 upstream_gene_variant
C/T 8563328 upstream_gene_variant
G/A 8563343 upstream_gene_variant
A/G 8563390 upstream_gene_variant
G/A 8563404 upstream_gene_variant
G/A 8563426 upstream_gene_variant
T/C 8563446 upstream_gene_variant
T/C 8563530 missense_variant p.Ile59Met
C/T 8563533 synonymous_variant p.Gln58Gln
C/T 8563653 synonymous_variant p.Arg18Arg
C/T 8563667 missense_variant p.Ala14Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24514.1
MVALVCLGKWFDMANDFRLRFAKEIRGERLVVLDEHNKRDILIPGTGGVTIKAVSELQISELLNQKLTVKEKVPSITEMRTPSWDNRGLKKGTWTPEEDRKLVAYVTRYGSWNWRQLPRFADNEIKNHWHTTLKKRLGKKAVYTETNVKASKSNSFGSNPDKDCIQNNGFFLEASHSPTVSKASDPDPLSPELSSSEFSSSDYTTRQNLFLEDGFDFLDAYLADMNQNISTESFHISQVTSQANGIDNFHGSDAPKTMECVRPESPLSYYNENSLVENDDFGFLEAIEPITEHSWTEAFVADMSLIPNELLVPLVNESESYFSSAYDVDDIWCV*


CDS Sequence:
>Vu_24514.1
ATGGTGGCATTGGTGTGTCTGGGGAAATGGTTCGATATGGCCAATGATTTTCGGTTGAGGTTTGCAAAGGAGATTCGTGGAGAGAGGTTAGTGGTGCTTGATGAACATAACAAAAGGGATATCTTGATTCCTGGAACTGGAGGAGTTACCATTAAAGCGGTTTCTGAGTTACAGATATCGGAGTTGCTTAATCAGAAATTGACAGTAAAAGAGAAAGTTCCTAGCATAACAGAGATGAGGACCCCTTCCTGGGACAACAGAGGACTTAAGAAAGGCACCTGGACTCCAGAGGAAGATAGAAAGCTAGTAGCTTATGTCACTCGATATGGCTCTTGGAATTGGCGCCAACTCCCAAGATTTGCTGATAACGAAATAAAGAACCACTGGCACACCACTCTCAAAAAGCGTTTGGGAAAGAAGGCAGTTTACACTGAAACAAATGTGAAAGCCTCAAAATCAAACAGTTTTGGGTCCAACCCGGACAAGGATTGCATTCAGAACAATGGTTTCTTCCTCGAAGCTTCTCACTCTCCGACAGTTTCTAAAGCCTCTGATCCTGACCCTTTGTCCCCGGAATTATCCTCAAGCGAATTCTCGTCCTCGGATTATACCACTCGCCAAAATTTGTTTCTTGAAGATGGGTTCGATTTTCTAGATGCATACTTAGCGGACATGAACCAGAATATTTCGACAGAATCATTTCACATTTCTCAAGTCACATCACAAGCCAATGGTATCGACAATTTTCATGGTTCAGACGCACCGAAAACCATGGAATGTGTTCGGCCAGAGTCTCCTCTTTCTTACTATAATGAAAATTCCCTTGTGGAAAATGACGACTTTGGCTTTCTAGAAGCAATAGAACCAATAACTGAACATTCTTGGACGGAAGCATTCGTGGCAGATATGTCTCTTATTCCGAACGAATTACTTGTTCCTTTGGTGAACGAATCCGAATCGTACTTTTCTTCTGCGTATGACGTGGATGATATCTGGTGTGTCTGA


Promoter Sequence:
>Vu_24514::LG6:8563706-8565706(-)
TGATATCACAACTTTTACATTTCTTTACTTATTTAATTTATTTTTAGTTTATGTTACTAATTTTTATACCTATATTAATTTTATCTAACTTCTCTAATTATTTTTACTTCATTCAACCAGATAAAATTTATTAGTTTATTTATCTATATTGAAATCATCTTTTTACTCCCATTACATCTATAAAATCTTTAGCTTTTAATGTATTTTACATTGGCATACTTATAATAAAGTCACTTTAATTATTTTTACTATTTCTTAGAATTCTTTTTTATTCTACTATTTTTCTTCTTGGAACACATGTTTTATCATAAAATTATAAAATAATAAAAAATATTAAGTTTTCTTACACCTTTTCTATCCAAATGCTAATTTATTGCAATCACAAATATATATTTTGATTGTATTAAGTATGTATTATATATGTTCCTTTTAAGTCTAAATTTTTTTAAAGGAAAATTACAATCTAAATTATACTTATATTATATGTTATTTTAAAGTATGTACTTTTTTTCTAAAATTCTTTCTTTGATTTTCTAGAAGACTTTTTAAAAATGAATATCTTACGAAATCATCAAATTTCAAAAGAATGGTGATTAATTGCAACCATCTTTGGATTGAGATAGCTCCAATAAGTTTGGGAATGATCTCTGAGTGAGGAGGTATTCGTTTTCCAACGTTTTTTTTATATAAATTTTATAAATTTATATATAAATAAAAATATTTTTTTAAATTTTAATATATTATATATTTAGTATTTAATATATATATATATATATATATATATTTAAAAAATTACATGTTTAAAATATTTCTTTTTGGAGATCCACCACTTAATAAAAGTACACCATGTTCTCTACAAACAAAGTTAACTTTTTTGTTCTTTTATAGGTTAAACCCCTTTAGTTGTCTCTATTTTTGTGGATTTTTTCTAGTTTGATCCTCGTTTTATTAAAATTGTCAATTTAGTCCTAAAAAATGCTAATTTGAGTCAATGAGTCACTGCCGTTAAATTGGCTTAACGGAGTTAAGTTTTTTATGAGAAAGGACGTTGACGTGGCCAGTTTTTGTCACATCACTCCTGCCACGTCAGCATCATCTTCCATAATAAGGGAAACCCTAATTCCCTCAAGAGTGAAACCCTAGTCACCGCGAGCAAACCCTAGTGTCACCACCGTAAAGCCGTTGTGAAGCCTTCAGTCTCGCCGTCGCCAGCTTGCTGCGAAGCCTTCAGCCATCGAATGTCGACATCCCGTAACATCCAAAATCAAACCCCAAATCTGCAAGAGAACCAGATCGGAACAGAAACCACATCGCGGCCAAGTGCGAGCACCATCACGCCAACCAGAAGCAAGAGAAGACCATATCTGAACCGGAAAACCTAAACCTCTTCTCCCTCTTTCGCAAGTCACCATTAGTGGTAGAAACCACCACCAAACCCACTGTCAGTCACACATTCAACCTACAGGAAACCAAAAAACAACAAAACGAAGGCCACCACTGGTCGTGCCTCTGTCGTCGCGAGAATGAGGACTATTGTGACGTAGCGCCGTCGTAACTCAACTTCTACATATCTAAACCTACGAATAAGGACCAACACGACCCTCCATCGTCTCATCAACGTTGTTGCGCGAATAAGTGCAAGCCGCCATGAAACCCCAAGACATCGTGACGAAAGCCGTGAAGAACCCCGGTTACCCTCTTCTTGCCTTTAGCAGGCGACAAACCAGCAACCTAATGTTGTTGCGAACACCACTGCCTGAAACCGGGATGTCGGCATTCGCAGCCTTAAATCTCCTCGTCGCCACGAGAGGAAGAGAACTTATTGTCCACGAGAGAGGAACTCAAAGATTTGGGAGAAAATAAAATCTGAGTTGCATGAATAGTCTATCAGGAAACTAATCTAGGGTTCACTTCTGATCCCATTCCTAATCCAACAACCCTAAATTCAGCGAACCCAAAGGCACACTCCACTTATTCCAAACCTCTCCCAGAGTGTTGAG


Gene Sequence:
>Vu_24514(-)
ATGGTGGCATTGGTGTGTCTGGGGAAATGGTTCGATATGGCCAATGATTTTCGGTTGAGGTTTGCAAAGGAGATTCGTGGAGAGAGGTTAGTGGTGCTTGATGAACATAACAAAAGGGATATCTTGATTCCTGGAACTGGAGGAGTTACCATTAAAGCGGTTTCTGAGTTACAGATATCGGAGTTGCTTAATCAGAAATTGACAGTAAAAGAGAAAGTTCCTAGGTATTTTAATAAGATTTTTTTAAAATTATATATTCCACGTACAAAGTATGAGAATGCCATGTTTCAAAAAATGACCCACGTCAACGTCCTATTTCATAAAAAAACTTAACCCTGTTAAGTCAATTTAACAGCAGAGATCCAATTGACTCAAATTGGCATTTTTTCAAAACTAAATTAGAAATTTTAATAAAACGGGGATCAAACTTGGAAAAACCCGACAAATATAGGGTTTAACCTTTTTTATATTAAAGTTCTTTTTTATTATATTGAGTTCAAATACTTTTGCGACCTGATTTGTTGATTGAGACTTTAAACATTATTATTAAATAACTCTTTAATATATCAGTTTGAACCTGTAATAATATTATCATTCATCCTTACACTGTATAAGGAATAGTAACTTCTTTTCTTTTTCATGTATACACTCAGATAAACTCTATATCAAGAAGAAAAATTAAAAATCTTTGCATAAATAAAAAAAGGTTAAGTTAAATATTACACATTACATTAAAACGGTAAACCAGTCCGCTATTATTATTTGTCAGAGGTGAAGATTGAACTGAATTAGATAAACTTTATCATGTACAAAAAATTTCAGTTTATAAATTCTCTTTATGGTTGAGATGATTGAGTGCTTTCAGTTATTGGTATGTGTTTTTTTTTTAAGAATTGATATTAGTATGTAATTAAATATAAATGTAATTTTCTATTTTGTAATAAAAAAATAAGATTTTTTAGAGTGAAAACATCATATAGTAATTAATCTACGTGATTTTTGATGATAAATTCTACTTATTACTCCACTAAAAAAATGTTTATTTATTAATTATGATCAGTTTTTCCTATCATAATCTAACAAGTAACTGATATTTTTGTCATTAAAAAAGTTAGTTTTTATATTTATATGTAGAGAAATAAAAAGGTAAAATAACAAATATAAAATGTGTGTAAAAAAATGTCAAAATAATATATTCTTAGTTTTGGAATTATATTGATGAAGCATGAAACACATGTCGACTACTGTAACGCATGCAAATGCGAATATAAATAAGCAAAGGTTTCAATGATTTGGGGTCTGATTACAGAGGAAAGAGCATCGACAAAAAATAATGATTATCTCAGTGTAATTTGTGACTGAAACTACATTGCGAACACAGCATAACAGAGATGAGGACCCCTTCCTGGGACAACAGAGGACTTAAGAAAGGCACCTGGACTCCAGAGGAAGATAGAAAGCTAGTAGCTTATGTCACTCGATATGGCTCTTGGAATTGGCGCCAACTCCCAAGATTTGCTGGTAATTCAACATATTCATCATTCTTCTTATAACTGATACTTCTTCCATGAAATGAAAAGGTTGAATAAGTTCAGCGTTCTGCAATTTCATCGGTGCATTGATTTTCAGGTCTGGCAAGATGTGGAAAGAGCTGCAGACTTAGATGGCTCAATTATCTCAAGCCCAACATAAAAAGAGGAAACTACACTGACAAAGAAGAAGAAACTATAATCAAACTGCACGAAAAGCTCGGTAACAGGTACGTCCACTTTTTTAAAAAAAAAACTTCCTTGGAAAATTCCATTTTATTTACTTAATGTTTGTGTTTTCTTTTCTCCCTTGTAGATGGTCTGTTATTGCCACTCATTTACCCGGAAGAACAGATAACGAAATAAAGAACCACTGGCACACCACTCTCAAAAAGCGTTTGGGAAAGAAGGCAGTTTACACTGAAACAAATGTGAAAGCCTCAAAATCAAACAGTTTTGGGTCCAACCCGGACAAGGATTGCATTCAGAACAATGGTTTCTTCCTCGAAGCTTCTCACTCTCCGACAGTTTCTAAAGCCTCTGATCCTGACCCTTTGTCCCCGGAATTATCCTCAAGCGAATTCTCGTCCTCGGATTATACCACTCGCCAAAATTTGTTTCTTGAAGATGGGTTCGATTTTCTAGATGCATACTTAGCGGACATGAACCAGAATATTTCGACAGAATCATTTCACATTTCTCAAGTCACATCACAAGCCAATGGTATCGACAATTTTCATGGTTCAGACGCACCGAAAACCATGGAATGTGTTCGGCCAGAGTCTCCTCTTTCTTACTATAATGAAAATTCCCTTGTGGAAAATGACGACTTTGGCTTTCTAGAAGCAATAGAACCAATAACTGAACATTCTTGGACGGAAGCATTCGTGGCAGATATGTCTCTTATTCCGAACGAATTACTTGTTCCTTTGGTGAACGAATCCGAATCGTACTTTTCTTCTGCGTATGACGTGGATGATATCTGGTGTGTCTGA