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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24473 LG6 8087525 8090049 PREDICTED: basic leucine zipper 34-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/G 8088684 intron_variant
A/T 8088844 intron_variant
T/A 8088880 missense_variant p.Gln226His
T/G 8088881 missense_variant p.Gln226Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24473.1
MAQLPPKIPNLSPGWPDFSSQHQKMPLPPLINDTTTTTHQNQNPSWVDEFLDFSSARRGAHRRSVSDSITYLDAPMRCGENNNHNNSNGNGNEFDRFDDEQFMSMFTDEVVLSGVPLPPPTTLSSSNPSSPSDQNFFHDEKESSRKERKLQKEEEEHHHQLKNEAAEVESQCMQEIAQPPNDTNTSSSNERISDPKRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYQQQRLKKMENAAESGPLPLCDVQREKEVQLLNV*


CDS Sequence:
>Vu_24473.1
ATGGCGCAATTGCCTCCAAAGATCCCAAACCTGTCACCGGGTTGGCCGGACTTCTCTTCTCAACACCAGAAGATGCCATTGCCACCTCTTATCAACGACACCACCACCACCACCCATCAAAATCAAAACCCTTCTTGGGTGGACGAGTTCCTCGACTTCTCCTCCGCCCGCCGCGGCGCTCACAGGCGGTCGGTGAGCGACTCCATCACCTACTTGGACGCACCGATGAGGTGTGGTGAGAACAACAACCATAACAATAGTAATGGCAATGGCAATGAGTTTGACAGGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCCACCACCGACTACCTTGTCCTCCTCTAACCCTTCTAGCCCTTCCGATCAGAACTTCTTCCATGATGAGAAAGAGAGCAGCCGGAAGGAGAGGAAGCTGCAGAAGGAGGAAGAGGAGCACCACCACCAACTGAAAAATGAAGCAGCCGAGGTTGAAAGCCAATGCATGCAGGAAATTGCGCAGCCTCCAAATGACACCAATACTTCTTCTTCCAATGAGAGAATTAGTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGCAACTTCATTACAGGCTGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCACCAACGTTTGCTTCTAAATGTGGACAACAGTGCTCTCAAGCAAAGGATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTTTATCAGCAGCAGAGGCTGAAGAAGATGGAAAATGCAGCAGAATCAGGTCCATTACCATTATGTGATGTTCAAAGAGAAAAGGAAGTACAACTTCTGAACGTTTGA


Promoter Sequence:
>Vu_24473::LG6:8090049-8092049(-)
TAGAAGAAAAAAAATAAAGAAGTAATAATTTTACTAAATAGCGAATCAAACTTGTGTTATTTTTAAAAAAAATGTAAATTTTAACTTATAATAAAAATAAAAGACTCAATTTTGAACAATCTATTTTCATTAGTCAAACTTAAATTTCAAATGTCTGACTCGGTTCAGTTAGACTTTTTTACAGTCGTATTAATCCTTACAATTTTACTCGTTTTGATAAATAAAGATGAAATAGAACTATATACATACAAAGAAAGTTATTGATGGAAAAATGTTGGATGTTAGGATTATTTTTATCACTATAGTTTTATCTAATATATATATAATTAATATGGATATTATATTAACGATGGATATATATTTACAGTACATATCAATTTTTAATATAAGGCAACAAATTTTTCATACCTTTAAAATTGTGTCATACTATATATTAGAGAACTTCTATCCCTATACAATAATTTAATAAACAAAATATACTAACATAAACTAACATAAACTAATTTAGTACCAAACTTTTTACGATGCAATAAATTTCTTAGGGTGCATTTGTTATCTTTATCACTTAGCTTGAATTGCAATGCTATGAAGTGGTTAAGGGCATAAATGCATGTGTGAAGTCTATTATTATAACTTGTAGGTATATAGTAAGCACATAGTATTAATTTGTAGGGTGGGGTATGACCAAAAAAAAAAATAAAAGTATAGGATTGAGATAATGATTAAGGTAGGAGGGGAAGGCAAGGCCTAATAAAGAACCATATATATTGTATTAATAATATAAAGTTCATCCATTAAGATAGTTCTAATCATATTAAGCTTTGATAAATACTTTTTTATTTAATTAAAAACTAATTAATTAATTTCAAAAGAAGAAGATATCGGGAAAGAAACAAAAATGATATTTGAAACATAATTTTTTTTATATTAATTTATTTTTTTTTTTACATTTTATTTTCTGGTTTTTTTAAAAATATAAAAAAATAATTTTTTTAAATATTTTACTCTTACGATTATAAATGATAAATGTGTATTATGGTATGTTTATTTCATAAATGAATAAAAACACATAGAATTAGATGTTGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGAGGCATATACCCTACATGTGAGAATGGTTTGGGGACAAAGGAAAGAAAGGATAGTGCGTGGAAACAATTCACATGGGAGCATAAGATAACATGATCCTTCATCTTTTTCTTATCTTAATTACCTTTTAACGAAATGATTAATGAGACACGTTGCATTATAAGCACTGCAACATTATTAAATAATCTCATGCACATGGCCTTTTCTTTCTATCACTAACCCCTCAACTAGACAATATATCTTTTCATTCATCATCATGCTAATACAAAATACCTTAACGAAATATATATTTTGGTGAAAAAGATAAAGAAAAATAAGGGCATCCATCCACTAAAAAGACGGACACAAGGGCACGTGGTGGCTGATTCCCACTACTTATTAAACCACTGGCGACTTTCCAGTAACACCGTTCAAACCCAACCCCTCCTCCCAGCTGTTCATAGCTGTCCAATCCCTTCCCATCCCCATGTGACCCCACTGCACAAACACATACATACAGATACCCCAGAGATTTTTTTCCCATTTTTAAACCCCAGAACAAAATATAACTATTCAAAATTATACCTTTTTCTTTTTTTTTTTAATTTTCAAAACTTAAGAAAGTTCATGATTGTGTTGTTTTTTGTTCGTGTGCCTTTCTTACCTCTAACAACATTCCCCTGTGCTTGCTGGGAACGTGCATATATATTTATAAAAGAGATGTGTTAAAGCCTTGTTTCATTTCTTCTCTCTCTTCTTCTGCTGCATGATGTCATATGCAATATACAGATACAATAATGTGCATATTTTTCATAGGGACATGTACAACTGCAACAACATTAACATCCGAGGTTAATCTGTGGTAACACTTTCTTTCTGGTTTGGTGTGTGTGTGTGTGTTTCAA


Gene Sequence:
>Vu_24473(-)
ATGGCGCAATTGCCTCCAAAGATCCCAAACCTGTCACCGGGTTGGCCGGACTTCTCTTCTCAACACCAGAAGATGCCATTGCCACCTCTTATCAACGACACCACCACCACCACCCATCAAAATCAAAACCCTTCTTGGGTGGACGAGTTCCTCGACTTCTCCTCCGCCCGCCGCGGCGCTCACAGGCGGTCGGTGAGCGACTCCATCACCTACTTGGACGCACCGATGAGGTGTGGTGAGAACAACAACCATAACAATAGTAATGGCAATGGCAATGAGTTTGACAGGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCCACCACCGACTACCTTGTCCTCCTCTAACCCTTCTAGCCCTTCCGATCAGAACTTCTTCCATGATGAGAAAGAGAGCAGCCGGAAGGAGAGGAAGCTGCAGAAGGAGGAAGAGGAGCACCACCACCAACTGAAAAATGAAGCAGCCGAGGTTGAAAGCCAATGCATGCAGGAAATTGCGCAGCCTCCAAATGACACCAATACTTCTTCTTCCAATGAGAGAATTAGTGACCCCAAGAGAGTCAAAAGGTACGTCTACTATTCTCATTAACCATTCATATTTTTTCTTCCTCCAGTTTTAAACCATTACACAGAATTTCAGTCTGTTTTTCTCATACAAATTTTGCTGAACTTCATGTTACCAGAATAATTCTTCGAGTAATTAGTCTTTCACCACCCAGATAGTAATCAAACTTGTTCTCATCTCTCGTATTATTTTCCTCTTTATCGTACGACCAGTCATATCAATTATTTATTTCTTTTTTATTATTTTCTTCTGGAGTTTCTAAAGAGATGTCTACCAATTTTTTTCTTGAAAGAAAGCGGTGAATGTCTATTCTAATTTTGAGGTGGATAAATGATTCTTATACTTGAGAATTGATTCGCAAAATTAAGCGGTGTTTTTTCTTTTCCATTGGCTTCTGTAAAATGTTTCGTTCTTTTTGGGAAACTGAAAATGAACCATGAATTAGAATTTTTGTATTTTTGGAGTTCTGTTTCTAATTGTCGTCTTGCATCAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGCAACTTCATTACAGGTTTGCGACGTAACGTGATGTGACTACAATAAATCTTTGCTTGGTGCTGATAAAAAAATCTTTGCCTTTATTAAAAAAATCTTTGTTTTTTTCCTCAGTAGCCACAATAAATACTTTTTTTTAAAGTTAATTTTTATATGCCATAATAATAAATAACATAATTTTTCTTCAATATTTTTATATTAAAAATTCACTTTTTTTCTTAATTGTTTTCATCACCTGCCACTTATTTTATTTCACATTTTTCTATTGTTATGAGAAGCATTTTTTAATACGTGTGGTTGAAATAGCATTCACGAAGATAAAATATTGACCCTTTCCCAATCCGTTGACAAATGAAGGCTGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCACCAACGTTTGCTTCTAAATGTGGACAACAGTGCTCTCAAGCAAAGGATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGGTAATTACTTTTCTTTAATTAAAAGTCTAATTTTTATTATGGATGACATAACTAACAACCCTGTTAAAAGATGAGGTTGATGGAAGCATTAATTATTACTTTATGGCATTTAGAATCCATGCTATTTGTCTGATCCAATGTGCTCTCCATTTACTTTTTCCATGTAAGTGAAATAAAAATTCCTCATAGTTTGGAAAAGTGTATTTGTCCACAAGAAGCTCATTTTGCCAAGTGAACCTAACCTCGTGGCTTTACTTGTCTTGATACTTGCTTCATGCATGTGATCTTATTCTCTCTCTCTTTTCTCTCAAAACTCTATTTAATACCAAGAGAGAGAAACAGAGAAATGTGGTTTAAAGAGAAACAGTACCATCACTGGAAACTGCAGTTCTGGTTTCTGAAAACATATTTTGTTATCAAATTGGTTCGAGAAACATGGAAGTTAATATGAACTTACTGTATAACTTTGTGTTTGTTTTAAAACCAAGAGGAAAAGAAAAAACATTTGTTTTAAGAATGTAAAGGAAAGAGAGAGAGAGAGTGGTAATTATTTTATTAACGTAGTTGCGAGAGAAAGACCAATTATGAAAGTGCAAGAGTTATATTGATTTTAGCGAAAGCTTTTCGTGTGCACGCGTATTTAAGTCTGTGTCCGATCATGTGTGATGTCTCCAAGTAGTTAAAATTGTTTAACTGATTAATGATAGAAATGATACAAACGCAGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTTTATCAGCAGCAGAGGCTGAAGAAGATGGAAAATGCAGCAGAATCAGGTCCATTACCATTATGTGATGTTCAAAGAGAAAAGGAAGTACAACTTCTGAACGTTTGA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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