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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24328 LG6 6129327 6130132 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, recognition of pollen, recognition of pollen, protein phosphorylation, recognition of pollen, recognition of pollen
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasmodesma
Molecular Function   enables   ubiquitin protein ligase binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, ubiquitin protein ligase binding, protein serine/threonine kinase activity, calmodulin binding, ubiquitin protein ligase binding, ubiquitin protein ligase binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_24328.1
MLIINGVARGLLYLHQDSRHRIVHRDLKAANVLLDSEMNPKISDFGLARSFGGNEIEATTKHVVGTYGYLPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNKGFCHQDNLLAHVWRLFTEGKCSEVVDAAITESVHLSEALRTIHVGLLCVQLNPEDRPNMSSVVMMLSGESALPQPNLPGFFTSTSMAGDSSSSSSHKQYTNNDLSLSIMSAR*


CDS Sequence:
>Vu_24328.1
ATGCTGATTATCAACGGGGTTGCACGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCATAGAGACCTCAAAGCGGCGAATGTTTTGTTAGATAGCGAAATGAACCCAAAAATCTCGGACTTTGGACTGGCTAGAAGCTTTGGAGGAAATGAAATCGAAGCAACCACAAAACATGTAGTTGGAACCTATGGCTATCTTCCTCCAGAGTACATAATTGATGGAGCTTATTCAACAAAGTCAGATGTTTTCAGCTTTGGTGTGCTGATATTGGAGATAGTGAGTGGGAAGAGAAATAAAGGATTCTGTCATCAAGATAATCTACTGGCACATGTGTGGAGGCTGTTTACTGAAGGCAAATGTTCTGAAGTAGTTGATGCAGCAATAACTGAGTCAGTCCATTTGTCTGAAGCTCTAAGAACAATTCATGTGGGACTACTGTGCGTGCAACTAAATCCTGAAGATAGGCCAAACATGTCATCTGTGGTTATGATGCTAAGCGGTGAATCTGCACTGCCTCAGCCAAACTTGCCTGGATTCTTTACAAGTACAAGCATGGCTGGTGATAGTTCATCATCAAGCAGTCATAAACAATACACAAATAATGACTTGTCACTTAGCATAATGTCTGCTAGATAG


Promoter Sequence:
>Vu_24328::LG6:6130132-6132132(-)
ACCGTTTTGGAATATCTCTTTCTTACAGAAGCTACTGAAGGAAAGCAATTGCATAAATCCAACATCTGGAAGTACAAGAGTGTTTTCATAATTTGTGTGTTGTTTATTGGAATTTTAATACTATGTTTAACCTTCATCACCCGTTATAAACGGTTGAAGACACGGCAGAAAGGTGGTTAAGTAGTTCCTATTTATGATTTTAAATTACGTGTCTTGATTCTTCTATATGTTCTTTTTACTGCAAACTTAGGCTGCTTTATCCACAAATTTGAAACACCTCTATAGGTGATGATGTAAGCTCTGAGTCAGTGCATGCAGGCATATTTTACTTAGTTACCTTATAGATTTTAACTGTCTTTGAGTTTATCTTTCTCCCTTGAGATTTGGTTAACTGGTATTAATCTCAACAAGAATAACTCATTATTCACAATCATTAAAGCACTTTAATGCTAGTCAATAAAGTGAGTAATGTTGTCAATAGCTGCATAAAAAAGGTGTTTAAACTAAGTTTGCTTTTATTCTGTTTTAGACTTGGGTGAGGCAGATTAAGGTACAAAGAGTACAGAAGACAGCATATTCTACAATTCGACTTCTTTATTCCTTACACATTCCAATTACTATATTGCAGGAAAGATGGAAGGTAATCTAGAACCAGACGTGAATGTAATAAATGAGCACGAGAGTAAAGATCTAGAGTTACCCATGTTTGAGTTGTCTACAATTACTTCTGCAACCAACAACTTTTCACCTGACAACAAACTGGGAGAAGGTGGCTTTGGATCAGTTTATAAGGTAATTAATTGATAAAATGTCTTCACGGAGCATAGAATGCATGATATTTAATAATTGTTTACATTTTGTGCAGTGTTGTACCACTATATGGTCAAATAATGGTTAGAAATGATAATTATAAGAGACAGGACTTATAGCAATGTCTTTTTCTGGAAGAACTCTGGGAACTATTTGTTTTAAGAAAGTATTTTCTGTTTTCCATTTTTTGTTACAATAAAACATGTTTCCTTATTTTGCTTTATTTATTGTGAGTCGAAACGATTTTAAATTTTGACAGCAGACAGATTTTATTTTTTCTATTTGTTATGCCAATATATTTGAAAACAGATAACAGATTCAAAGCAGTATTATATTTTATAAATTAAAAAATGAAAATAAAAAACAAAAGACAAAAGTAGTCAGACTAGTAGACCTTGCAGAGCTTAGCTGATCTGCTGATGACTATAGTTCTGATTCTATGCATCTTTTCCTTTATTAATTCGCTGCTTGTTATATATCACATTTCATATATCACGTCATTGAACTTCTTTTTAATCAATTCTCCATATTAGAAAAGCGAAATTAAATGTTGGAACACATGAACTGAACTATTAAAGTTATGTAAATTTTCCTGTAACATATTTTAGTAAAATGAAGTCTATTCATAGCTTAATCTGTCATTGTCACGAATTCCAGGGCATCCTGGCCGATGGAGGAGAAATAGCTGTGAAGAGGCTCTCTATGAATTCCAAACAAGGACTTCCAGAGTTCAAAAATGAAGTTATGCATATTGCAAAGCTTCAGCACAGGAATTTAGTGAGGCTACTAGGGTACTGCCTTCAAGCAGGAGAAAGATTGCTTGTATATGAATTTATGCCCAACAAAAGCTTGGATTCCTTCATATTTGGTTTGTTTCAAGAGAAACCTTTTTTTATTGTTTCATTCATTTGGGGTTATATATTCATTTGTTTAATTGGATTCTCTTAGCTTGAAAATTATTGCAATTAAACAGATACATACAAGAAAATCATGCTAGAAAGGAAATAAATTTTCCAATCCAGTTATTTATCATGGCATGAGGAAGAGATATTAATTTATTTTGCACTTAAGTTTATCATTCCATAATCTATCTATATAGAAACTACTGAAACTGATCTACCACTATCTAAAGCTTGGTCACATTTTTCTCAGATGAAAACAAGAGCATGTTACTAGATTGGCCAAGGCGC


Gene Sequence:
>Vu_24328(-)
ATGCTGATTATCAACGGGGTTGCACGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCATAGAGACCTCAAAGCGGCGAATGTTTTGTTAGATAGCGAAATGAACCCAAAAATCTCGGACTTTGGACTGGCTAGAAGCTTTGGAGGAAATGAAATCGAAGCAACCACAAAACATGTAGTTGGAACCTAGTAAGTGTCTGATTACACCAATGTAGTATGAGTATGATCGCTTGGCACTGTCTTACAATGACTTTTGGTGCATGTGATTGTAGTGGCTATCTTCCTCCAGAGTACATAATTGATGGAGCTTATTCAACAAAGTCAGATGTTTTCAGCTTTGGTGTGCTGATATTGGAGATAGTGAGTGGGAAGAGAAATAAAGGATTCTGTCATCAAGATAATCTACTGGCACATGTAAGAATGAACTTGAAATCTAACCACCTTTGAGATGTTTCTGCTGATAACCAAATGGTTTGAAAACTTATGCAGGTGTGGAGGCTGTTTACTGAAGGCAAATGTTCTGAAGTAGTTGATGCAGCAATAACTGAGTCAGTCCATTTGTCTGAAGCTCTAAGAACAATTCATGTGGGACTACTGTGCGTGCAACTAAATCCTGAAGATAGGCCAAACATGTCATCTGTGGTTATGATGCTAAGCGGTGAATCTGCACTGCCTCAGCCAAACTTGCCTGGATTCTTTACAAGTACAAGCATGGCTGGTGATAGTTCATCATCAAGCAGTCATAAACAATACACAAATAATGACTTGTCACTTAGCATAATGTCTGCTAGATAG

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