Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24316 LG6 5849080 5850725 PREDICTED: myb-related protein 330-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 5849154 synonymous_variant p.Ile25Ile
G/C 5849325 intron_variant
T/C 5849350 intron_variant
A/G 5849389 intron_variant
G/A 5849636 intron_variant
G/A 5849647 intron_variant
C/T 5849836 intron_variant
A/G 5849871 intron_variant
A/T 5850087 missense_variant p.Gln109Leu
G/A 5850130 synonymous_variant p.Lys123Lys
A/T 5850136 missense_variant p.Lys125Asn
G/A 5850155 missense_variant p.Glu132Lys
A/T 5850495 missense_variant p.Gln245Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24316.1
MTKSSTEKNGLKKGPWTPEEDQKLIDYIQKHGHGKWRTLPKNAGRTDNEIKNYWNTHIKKKLFKMGIDPVTHAPRLDVLQLASILNTSLFNSSPQFNYPFLSGRSVINSSQLLSLLSTLLSCQSRNNPDNVLNHNNFHQNDNQLLQNQPQCTQMQLADTLQTFQPNQPQVSLQENLIAKSNNPLNVDHQLMKSKSENQISPVATSFTHQNTLPNLWHYDNISDLQIAQSSSAMQCFSSPKFNSIFNSLLENQNLCNNEGMPNFNLSSLLSSTTSSSSPSTLNSSSSTTFVNGTTEDERDTYGSSNMLMYNISNGLNDSGLL*


CDS Sequence:
>Vu_24316.1
ATGACCAAGTCCTCTACTGAAAAAAATGGACTCAAGAAGGGTCCATGGACCCCAGAGGAAGATCAGAAACTCATCGACTACATTCAAAAACATGGACATGGAAAATGGCGAACCCTTCCCAAAAATGCAGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACCCACATCAAGAAAAAGCTTTTCAAGATGGGGATTGATCCTGTGACTCACGCACCACGCCTTGATGTTCTACAACTTGCCTCCATTCTCAACACATCTTTGTTCAATTCATCACCACAATTCAACTACCCTTTTCTTTCAGGAAGATCAGTGATAAACTCCAGCCAGCTGCTAAGTTTGCTTTCCACTCTTCTCTCATGTCAAAGCAGAAACAACCCTGATAATGTATTGAATCATAATAATTTCCACCAAAACGATAACCAACTCTTGCAAAATCAGCCCCAATGTACCCAAATGCAACTTGCTGATACCTTACAAACCTTCCAACCAAACCAACCCCAGGTTTCACTTCAAGAAAACCTTATTGCTAAGTCTAATAATCCATTGAACGTGGATCACCAACTGATGAAAAGTAAATCAGAGAATCAAATCTCTCCAGTTGCTACCTCTTTCACCCACCAAAACACCCTTCCAAATCTGTGGCATTATGACAACATATCAGACTTACAAATTGCCCAATCATCATCAGCTATGCAGTGTTTCTCTTCACCCAAGTTCAACTCTATATTCAACAGTCTCTTGGAAAATCAGAATCTGTGTAACAACGAGGGAATGCCAAATTTCAATTTAAGTTCACTGTTATCGTCAACAACTTCATCTTCCAGCCCAAGTACTTTGAATTCATCATCTTCCACCACATTTGTCAACGGAACCACAGAAGATGAAAGGGACACTTACGGCAGCAGCAACATGCTAATGTACAACATTTCCAATGGCTTGAATGACTCTGGACTTTTGTGA


Promoter Sequence:
>Vu_24316::LG6:5847080-5849080(+)
TAAAATTATAGTAATTTTAGAAGGAGAGGTTCAAATTTTTGGTAACTTATTTAGTAAATTTTTTTAAATTGAATAGTAAAAAGTAAATAGTAAATAGTAAATAGTAAAAAGTGAATAGTAAAAATAAATTTTCAGCATTTGGATTTCTTAGCATGGAAGAAAGTAGTAGGTAGAAATTAGGATCAGATTTGGTGAGAAAATGATTGAAATATTATTTTTAAATAATATTAAAATAATAAATAATATTAATGAATAGTAAATTTTTTTTACTATAAATAACTATGGGAGGGAAGATTATTTTGCACCAAGAGAAGAGAAATCAAGTGATAGAAAGTTAGAGAGAAATTTTTAGTTGCAAGAAGGGTAGAGGTTCTGAAAGGTTTCAGAGAAATAAATTCAGAGCAAGAGACGTCTGGAATAGAGGTAGGGGAGCTAACTTTTCTATGCTTTTATATTATGATTTAGTATTTCTATGCTTTTATATTATGACTTAGTATTGTTTTATTACTATTCATATCTTGAAATTATGTATGAATACTGTTAATGCTTACTGTATGTTTATCTATATTGAAATTCGGTGTTAATATTATATGCTGTTGTTTTGAATCTGTAAATAAGAAATTTGTTAAAAACTAGTTGAGGAACACTTTGGCTAAGGAAAGATTTGGTACTTAAGTTGTCCATTGTGACGCACCTCTCTTTCCTGGAAGTCTACTCGACAAGTTTTTAACTTAAATCTTATTGAACAGATTTTGTACTATTAAAATATTGTGCAATATATCTTGTTGGAATGGAAATGTCTGATGAATTCATTTTTGTGGTAGATATGGAATTATGAATTATAATTGTGATAATTGCATTTTATTATACTGCATTTGAATTTATGCATCTGAACATGTTATGGGTAGTATGGGGAGATTTTGTAAGGGTATAATGTGAGTTGAGGAATATTAGTATGGTATGAGTCTTGTGGAGAGATTAAATAAATGTTATGGTATTTGTGTATATGTTGATGTTGAGGGTCCCGTAGTTGGAGGTTATCCTGATACTCTAATAATCATCTAGTCTCAAGTAGAGAGGGATGAATTATGTGGTGAGAGGAGCAGGAGGTCCTGGTCTATGTGCCGGTTTTGGACATAGTGAGGGGATTAACCTTGTAAATGGTATGAAGTATTTTGAAAGTATATTAAAAAAAAGAAGTAGAAGTCATTACAAGTGCATAACCTCCCGTGACCGCTCATCAACGTATCATCCGGATGAGTGTCTATTGGGTATTGTGGTGTCTATTGGGTATTGTGAGACGAGTGTCTAATAGGAATTGTGGTATGAGAGTGTCGAACATAATTATTATATGATGTTTATATCAAGGTAATTATGCATGATTTATAAATGATTTGTTGCATGTTAGCTCACCCTACTTGTTTGTGTTTGGGTATGTGCGATGATCGTATAATTCGTTATACGGGAGCAGATGAAGGAATGTTGCCTCACTCAGTGCCAAGGAAGGGAGAAGTAGAAGAACTATAATTAGAACATTTTTACATGTATAGACTTATATCAACTAGGAAATTTTAAAGGGTGAGATTACGGGATGTTACCGTAAATGTAATGTTACAATATATAAATTATGAATTATCCAATGTGAGAATTTGGGATGTTACATAATCAGAAAAAAAAAGAAAAAAAGTGGAATATATAAAATGTTCATCTTGACTCATAATACGTGGGAGTGTATTTGTAAATTTTGTGAAGATTATAGACACGTCAAGCAAGTAATAAACATAGGAGTGAAAGGACGGTACCGAATCCCATTGACTTCAACATGTTTCTTAGGTAGATTGCCTTCCATTTAGCCTCTACTATATATACACACGCTTTCTCCCTCATTATCCTACAGCTCTTTCTTTTTTCTCTCTTTCTGATTTTCAGATACAAACTATAACCCTTCATCATCACAGACGTGTTGGGAATTTTCTGTCATTGTTCCATCTTCTTCATCA


Gene Sequence:
>Vu_24316(+)
ATGACCAAGTCCTCTACTGAAAAAAATGGACTCAAGAAGGGTCCATGGACCCCAGAGGAAGATCAGAAACTCATCGACTACATTCAAAAACATGGACATGGAAAATGGCGAACCCTTCCCAAAAATGCAGGTAACACTGATTACTTTATTTGTTAAGACCATCTCTAATTAAGTTTTACTTTATGCAAGTCATGACCTTAAAAAATTTAAGGATTTTGACAACTTTCTACTTCACACAATTTGTCGAACAAACTTCAAATGAATCTTATGTTATATATCTGTCAATAAATATTGCATTTGTTTTTTCATAATACGTAAGGACTACGAAGATGTGGAAAGAGTTGTCGGCTTCGCTGGGCGAACTACTTGAGACCTGATATAAAGAGAGGGAGATTCTCATTCGAAGAAGAAGAAGCCATCATCCAGTTACACAGTGTTTTGGGAAACAAGTAAGTGAGGAATTAAAGTCCTGCATTATTTTTCGTCCTAACCTTTTTTTTTCCTTGTTGGTACATGCATATTTCCTCAGTCTACTTTAACAATGTATTTAAAAAAAGAACCCTTTTTGAATTTACTTGTATGATATACAGAATCGCCAACTAATGCATGGACTTTAAACCCTGTGAACCATTAAAATTCATTTTGTAGTTAGAGAATGGTAGCTAGACAACTATGCAAAGTCAATGATGCATACAATAACAAACAATATTTTCTTCTTTTGTCTCTTTGTAACACGGCAAATTAATTATTGATTTCCAATGGAAATTTTTGTCCTGCACAGGTGGTCTACAATTGCTGCTAACTTGCCAGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACCCACATCAAGAAAAAGCTTTTCAAGATGGGGATTGATCCTGTGACTCACGCACCACGCCTTGATGTTCTACAACTTGCCTCCATTCTCAACACATCTTTGTTCAATTCATCACCACAATTCAACTACCCTTTTCTTTCAGGAAGATCAGTGATAAACTCCAGCCAGCTGCTAAGTTTGCTTTCCACTCTTCTCTCATGTCAAAGCAGAAACAACCCTGATAATGTATTGAATCATAATAATTTCCACCAAAACGATAACCAACTCTTGCAAAATCAGCCCCAATGTACCCAAATGCAACTTGCTGATACCTTACAAACCTTCCAACCAAACCAACCCCAGGTTTCACTTCAAGAAAACCTTATTGCTAAGTCTAATAATCCATTGAACGTGGATCACCAACTGATGAAAAGTAAATCAGAGAATCAAATCTCTCCAGTTGCTACCTCTTTCACCCACCAAAACACCCTTCCAAATCTGTGGCATTATGACAACATATCAGACTTACAAATTGCCCAATCATCATCAGCTATGCAGTGTTTCTCTTCACCCAAGTTCAACTCTATATTCAACAGTCTCTTGGAAAATCAGAATCTGTGTAACAACGAGGGAATGCCAAATTTCAATTTAAGTTCACTGTTATCGTCAACAACTTCATCTTCCAGCCCAAGTACTTTGAATTCATCATCTTCCACCACATTTGTCAACGGAACCACAGAAGATGAAAGGGACACTTACGGCAGCAGCAACATGCTAATGTACAACATTTCCAATGGCTTGAATGACTCTGGACTTTTGTGA