Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24090 LG5 71005157 71009153 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 71005179 missense_variant p.Leu659Ser
C/T 71005455 missense_variant p.Ser567Asn
G/T 71005909 upstream_gene_variant
A/T 71006008 upstream_gene_variant
C/A 71006212 upstream_gene_variant
A/G 71006251 upstream_gene_variant
C/T 71006504 upstream_gene_variant
G/A 71006591 synonymous_variant p.Leu426Leu
A/T 71006592 missense_variant p.Leu426His
G/A 71006601 missense_variant p.Thr423Ile
A/T 71007218 missense_variant p.Ser352Arg
A/T 71007544 upstream_gene_variant
G/A 71007642 upstream_gene_variant
T/C 71007878 upstream_gene_variant
G/T 71007886 upstream_gene_variant
T/A 71008086 upstream_gene_variant
A/G 71008087 upstream_gene_variant
T/C 71008164 upstream_gene_variant
A/T 71008166 upstream_gene_variant
A/T 71008175 upstream_gene_variant
G/A 71008177 upstream_gene_variant
G/A 71008366 missense_variant p.Ser263Phe
A/G 71008994 missense_variant p.Ser54Pro
T/A 71008998 synonymous_variant p.Ser52Ser
G/A 71009106 synonymous_variant p.Tyr16Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24090.1
MGCICSKAKSSSSHQYVSQNHTEGLKATPSPNTNTFGDTTSLISNVNQYSYSSSNATQEKASTPIFSDQIQQKGDKKANGNGVRSTTQTQLQQPKMSRLYSITRGERGVQVLAGWPSWLSAVAGEAISGWIPRRADSFEKLDKAIPIVIHCFLFPSLFNVTYQTNLPVMLQIGQGTYSSVYKARDLETNKIVALKKVRFTNMDPESVRFMSREVIVLRRLDHPNVMKLEGMIASRVSGSLYLIFEYMEHDLAGLAAIPDIKFSEAQIKCYMQQLLRGLEHCHSRGVMHRDIKGSNLLIDSNGRLKIADFGLATLLQSSQGLPLTSRVVTLWYRPPELLLGATDYGTTVDLWSAGCILAELFVGKPILSGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYIRVVSQTFKDFPSSTLSLLEVLLAVESDDRGTASSALRHEFFTTMPLPCDPSSLPKYPPSKEFDAKLRQEEAKRRRAPNKGHEYESLGNNFRESTAVPVPGTNAEFQATTGKPGLCNVKHVSEKYNYEKDDGYGFSREPVKATSTTHNVFSHSGQSMHPSVYGSSRTRNLKEENVLICPDHAFISRKSELSKHTSYWQGSAAKLSRFSNSIAARGDSLLEMSGGDFSVNSQLPEDQFGTRYSHKADGESNQLLDGLKS*


CDS Sequence:
>Vu_24090.1
ATGGGTTGCATATGCTCCAAAGCAAAATCATCATCATCACACCAATACGTTTCTCAAAACCATACCGAAGGTTTGAAGGCCACTCCATCCCCCAACACCAACACTTTCGGGGACACCACTTCCCTCATATCCAATGTAAATCAATATTCCTATTCAAGTTCAAATGCAACTCAAGAAAAAGCCTCCACCCCAATTTTCTCGGACCAAATTCAACAGAAAGGGGACAAGAAAGCCAATGGTAATGGGGTGCGATCAACGACACAAACACAACTACAACAACCTAAGATGTCTAGGTTGTATAGTATAACCAGAGGGGAAAGAGGAGTACAGGTTCTCGCTGGGTGGCCCTCTTGGCTCTCTGCAGTTGCTGGTGAAGCCATTAGTGGCTGGATACCTCGTAGGGCTGATTCCTTTGAGAAGTTGGATAAGGCAATTCCTATTGTTATTCATTGCTTTCTCTTTCCATCCTTATTTAATGTCACTTACCAAACAAACTTACCTGTCATGTTGCAGATTGGCCAAGGAACTTACAGCAGTGTTTATAAAGCTCGTGATCTTGAAACAAATAAAATTGTTGCACTGAAGAAGGTTCGATTTACTAATATGGATCCAGAAAGCGTTCGTTTTATGTCAAGGGAGGTTATTGTGCTGCGGAGGCTTGATCATCCCAATGTCATGAAGCTTGAGGGCATGATTGCCTCACGGGTCTCTGGTAGCTTGTACCTTATCTTTGAATATATGGAGCACGATCTTGCAGGACTTGCAGCAATACCCGACATCAAGTTTTCCGAAGCACAGATCAAGTGTTACATGCAACAGCTTCTTCGTGGTCTAGAGCATTGCCACAGTCGTGGTGTCATGCATCGTGACATAAAAGGTTCAAATCTTCTGATTGACAGTAATGGCAGACTGAAGATTGCTGATTTTGGGCTAGCAACTTTGCTTCAGTCATCTCAGGGGCTGCCTTTAACAAGTCGGGTAGTGACCTTGTGGTACAGGCCACCTGAACTTTTACTTGGAGCTACAGATTATGGAACTACTGTGGATTTGTGGAGTGCTGGATGTATTCTTGCAGAGTTGTTTGTTGGGAAGCCTATACTGTCTGGACGAACAGAGGTGGAGCAACTACATAAAATCTTCAAACTGTGTGGATCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGTTGCCGCATGCAACAATTTTTAAACCTCAGCATCCTTACATACGTGTTGTTTCTCAGACATTCAAGGATTTTCCTTCATCTACACTGAGCCTCTTGGAGGTCCTTCTAGCTGTTGAATCGGATGATCGGGGAACTGCATCTTCAGCACTTCGGCATGAGTTCTTCACAACAATGCCACTTCCTTGTGATCCATCATCTTTGCCAAAGTACCCACCGAGTAAGGAGTTTGATGCGAAACTTCGCCAAGAGGAAGCTAAAAGGCGAAGAGCACCAAATAAAGGACATGAATACGAATCACTAGGGAATAATTTTAGAGAGTCTACAGCTGTGCCAGTACCTGGTACTAATGCTGAGTTTCAGGCCACTACAGGGAAACCAGGACTGTGTAATGTTAAGCACGTCTCTGAGAAGTACAATTACGAAAAGGATGACGGTTATGGCTTCTCTCGCGAACCTGTAAAGGCAACGTCAACAACACACAATGTATTTTCTCATTCTGGCCAGTCAATGCATCCAAGTGTTTATGGATCCTCACGCACTAGGAATTTGAAAGAGGAAAATGTCCTCATATGCCCTGATCATGCCTTTATATCAAGAAAGTCTGAGTTGAGCAAACATACTTCGTATTGGCAAGGTAGTGCCGCAAAATTGTCAAGATTTTCTAATTCAATTGCAGCTCGAGGTGATTCACTTCTTGAAATGAGTGGTGGTGACTTTAGTGTGAATTCGCAGTTGCCAGAAGATCAATTTGGCACGAGATATAGCCATAAAGCAGATGGTGAGTCCAACCAATTGTTGGATGGACTCAAATCTTAA


Promoter Sequence:
>Vu_24090::LG5:71009153-71011153(-)
TAGTTAGAAGAAGAAACAAAGAAAGTTGACCACTCGAATGCAAAACCAAAACAACTTTGCTTAAAATGATCACATTTCAGAACGTCAGATATTCGAACCAAACACATGGGTAAAATCATTTCAATCTTCAGGGAGTTTAGCATATATCATCAAATTGCCGGGGTGCAAAAAACAGGCCAAGGAAAAATAATTTATACAGGCTAACAATAACATCTACGTGAGATTACACACTACATTCCTAAATTGATAACAAGGTTTATAAATAAAAGTCGTAGAGTGGGTTTGGCAGGCAATGTCAACGGTGTGACCTCAATTGTGGCCACATTCATTAACTATTTTTCGCAGTATCAATAAACCCAGGAAGCGGCACCAACAAATGCAATTCAAAAGATATATAAATAATCACAGAAAAAATATTAGTACATTAACTAATTTAATAATCACATAAGATCATAGGCCAGCGACTGGTTTTCAGCAGAGCAAACAGACAAAAAAAAAGAAATTTGGAACAGAGGGGGAGTAGTGTGGAGACTGTAACCGGGAGTTGTCTTCGGCAACATAAACATTAAGTTGAAAGCGGTAGAAAGTGTTGATTGCAATTAGAAGCAAAAAGAGGTGTGATAGGAGACGAAAGATATGGCGTTGAGGAGCATGAGAGGGTGTTTTGATTGAAAGCGATAGCAATAATAAATGAAGAGTGAGTGTAGTGAAGAAAAATAAGAGAGTTGGTGTGGGGAGAGCAGGTATTTAGGATTGTTAAGGCACATTAACTAGAAAAGCTAAGGGTTGAGGCAGGGAAAGACGGAGGAAAATGTGAAGTAAAGTTAGGTTTGTTGGGTATTTGAAGAAGGAAAGAGAGGAAGGGGGAAGATGAAATCGAAATTGAAATCGATTGGGAGAGGAAAAAAAGAAAGGAAAAACGGAAGCAGAAAGAGAAAGGAGAGATTGCAGAGAGTAGAGGAAGAGAAGAGAGAGAGCTTACAGCGGAAGGGACGGTTGATCCGGTGAAGAGGAGCGAGGAAGCGGAGAGGCGAAGAAGGGGATCAGCTAACCCTAATTGCAACGGATGCGAAGGTGAATTTGGGAGAGAGAGAGGAACAGGAGAAGGCGAGGGAGTTAGAGAAGAGAGGGGAATTGGTGAGTGGGACTTTGTTGGTGACAGCCTGTCTCCAGCTGTGTCCTCCGAACCTTCCGCTTCGTGGATAAAACCACTTGCTTCGACTTTCTTCCTAACCGACGTGTCTTTCTCCTTTTTCACATCCTTTTCACACTCCAACATCGTTTATTGTTTGTTCTCAAAAATATATTTAATTTAATTTAATATTAATAGGACAGGCTTTCTATTTTCACTTTAAAAATATTAAAAAATATATATTTGTCAACGTTTTCTCGTTATATATTTGAATTTGAATAGTAATAGTAATAGAAAAAGGAAGTAAAAATAACTATTTAAATTTATTTATATATTTAGGGGTGGGTGAGTGAAAAATGAAATATAATTGAAAGGTGACAGGCGTGGGTATGGGAGTGTGCATGGGAGGGAAAGGGATTTGGCGTAATTGAGAGACATTGTTAGAGATGTTGGATTGGAGATCCTAGGCGTCCAATGTTGCTCTAACCGCTCATCTCCTTTCAATTTCATGTATGCTATGTTTTTGTGTTTTCCGGTCAATGACACAGCATCTGCATGTTGTTGCTTGAACCACGCAATTGCATTGCCCTCTGTTTCTGTTTCCGTTCAATTGTAACCCACATTACAAGTTTCTCAGCGCCTCTGCAGATCCCGTTTTCTCTCTTTCCACAGCATCTCCTATCCCTTTTTCATCCGCATTTCGCTTCGCAATTTCTGTTTTTTTTTCCTTTCATTTCATTTGGCTGGGGAATCTGGGCAGGGCCACGTTGGGTCTCTTCTTCAATCTAATACGGTAGAATACAACAGAAAGAAAAAGAACATAAAAGCACATTCTCATTGGCATTGTTGGAAATTGGCGGCGGGTGTT


Gene Sequence:
>Vu_24090(-)
ATGGGTTGCATATGCTCCAAAGCAAAATCATCATCATCACACCAATACGTTTCTCAAAACCATACCGAAGGTTTGAAGGCCACTCCATCCCCCAACACCAACACTTTCGGGGACACCACTTCCCTCATATCCAATGTAAATCAATATTCCTATTCAAGTTCAAATGCAACTCAAGAAAAAGCCTCCACCCCAATTTTCTCGGACCAAATTCAACAGAAAGGGGACAAGAAAGCCAATGGTAATGGGGTGCGATCAACGACACAAACACAACTACAACAACCTAAGATGTCTAGGTTGTATAGTATAACCAGAGGGGAAAGAGGAGTACAGGTTCTCGCTGGGTGGCCCTCTTGGCTCTCTGCAGTTGCTGGTGAAGCCATTAGTGGCTGGATACCTCGTAGGGCTGATTCCTTTGAGAAGTTGGATAAGGCAATTCCTATTGTTATTCATTGCTTTCTCTTTCCATCCTTATTTAATGTCACTTACCAAACAAACTTACCTGTCATGTTGCAGATTGGCCAAGGAACTTACAGCAGTGTTTATAAAGCTCGTGATCTTGAAACAAATAAAATTGTTGCACTGAAGAAGGTTCGATTTACTAATATGGATCCAGAAAGCGTTCGTTTTATGTCAAGGGAGGTTATTGTGCTGCGGAGGCTTGATCATCCCAATGTCATGAAGCTTGAGGGCATGATTGCCTCACGGGTCTCTGGTAGCTTGTACCTTATCTTTGAATATATGGAGCACGATCTTGCAGGACTTGCAGCAATACCCGACATCAAGTTTTCCGAAGCACAGGTACCTTCTAATAATGCATAACAGAGTCTTAAAGATAACAGCCTTTCTCTCATGTACAACTGTAAATTTTTCTTGGAAGCATTTAAAATTCACTTGATGTCATTTTTCTGTATTTAAACTGGCACAGTGAACCATATTATTTTCAGAGTGAACCTTGTGAGATCTAGAAAGTGTCTATCATTTATATAATTAATAGAAGCATGACACAAGCTTTGAAGCAATGGATTGCTAAATATCTGTTTAAAACAAAAATCACTTTTACTACTACTACTACTACTATTATTATTATTATTATTGAATTTGACGAGTCAAAAACATTGTATATCTACGGGAGTCCTAGTGCTATTTATTGTAAAGGGTTTGACCGGGATAACAACGACATTTATAAGTTTTTTTATTTGAGTATCTCACCGTCTTGCAAAAATCCCTAGTGGCTCTAGAGCTGCAAAGATCTGACTAACTGCCTTTGCATTTCTTAGACCTGATTAACCTATTAGTTGAAATAGACAAGAAATCTGTTTAAAGCAAAGAAGAACGCTAAACAGTTAGGCACTGGTTATAAAATCAAAAGTAGAAAACATTAATATTTAAGTGTAACATCTTAGTTACCAACACACACACACACACCATGGATTCCGATAAAATCTTTGATTTATTGATTCCTTTGCGAGCATCCTTTGAGCACTTGGTAGCCGGTGTGCAGGACCCCGAAGCAAAACCCGAAACCAACAATAATCTTTTACTAAAAGCCCATGTATTCTTTGCATTCAACTGTATTCACAACTTAAAGTTCCGTGTCAGACTTCTTCTCTTATTTTCTTTTCTCATTAATGGACCTCGGCTTCTTGTTTACGGGTGAATATTTTATGTCATATTACAGATCAAGTGTTACATGCAACAGCTTCTTCGTGGTCTAGAGCATTGCCACAGTCGTGGTGTCATGCATCGTGACATAAAAGGTTCAAATCTTCTGATTGACAGTAATGGCAGACTGAAGATTGCTGATTTTGGGCTAGCAACTTTGCTTCAGTCATCTCAGGGGCTGCCTTTAACAAGTCGGGTAGTGACCTTGTGGTACAGGCCACCTGAACTTTTACTTGGAGCTACAGATTATGGAACTACTGTGGATTTGTGGAGTGCTGGATGTATTCTTGCAGAGTTGTTTGTTGGGAAGCCTATACTGTCTGGACGAACAGAGGTAGTATTCCTCTTTTGTCTTGGCTATGTGCAATTTTTTTGTCAGACATACTCAAGCCTTTGCATGTGATACCTTTATCATCAAAGCTTGATGATATAAGTCTTAAACTTATAGGTTCTCTTCTGTTACCTGTGCATATTTGCATCGGAGGATAGAAAGTTGTACATTTATAAAGTGATGTAAAGTAGAGGAAGAAATCAAATAAGCATCACATTTGTAATCTAACTCCAACATGTTAGTTTTATAGCCATTTGAGTTATACCTGCAATCAATTTATTGATGAGAAATGGTATTTACGAGTTAGGATATAAGATTTTTGACGGTGTCATTTGAAATACTTAATTGTTTTGTTACAACTTTCCATGGTTTAATTGGGAACTAAGATCTGGTAATATGTCATTCTAGGTGGAGCAACTACATAAAATCTTCAAACTGTGTGGATCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGTTGCCGCATGCAACAATTTTTAAACCTCAGCATCCTTACATACGTGTTGTTTCTCAGACATTCAAGGATTTTCCTTCATCTACACTGAGCCTCTTGGAGGTCCTTCTAGCTGTTGAATCGGATGATCGGGGAACTGCATCTTCAGCACTTCGGCATGAGGTAAATATTAGTTTTTTTACGAGTGCAGTTCACAGTACAAACTGTCTTTGAACAGAATGCACGTGTTACACATCCTAGAATTTTTTGAGCTGGGACCTCAGAAGATTTCTTTCCCATCCTCTTTTACATAGCGACTGACATTTTCCATGCTTAGTTCTTCACAACAATGCCACTTCCTTGTGATCCATCATCTTTGCCAAAGTACCCACCGAGTAAGGAGTTTGATGCGAAACTTCGCCAAGAGGAAGCTAAAAGGTATTCCTTCTTTGAGGATTTTATATTAGAGGATAATTTAGATTAAATTAGTTATCCGAAAATTTGACTATTAGCGGCGGTTTCACCTTCTAAACCTACTTTTTTTTAGTCAATTCTAATGTGATTTTGTCATATCTGATTTTTTTGCATTACCTGCAGCAATAGGACATTTTTCGCACACCTTTCTAGTGTGTGCTTTAATGATTCTTTGCTTTCTCTATGGATGTCTCAAGCAATAATAGAAACGTTTTGCACTTCTTTTCTCTTTTTTTTTCCCTTTCCTTTATGTTCTCTCAGGATATTCATTTCCAGAACCTCTGACTAGTGCAGAAGTATTTGAGTGTTATTTTGGTTGTTTTTCCTCTTCTTTTTGAGACATGACGTTGGTTTGATTTGCTTCATTGTCCTTATTGATTCCATGTGTTTCTCCTGACATCCATTTGTCTATTATTAAGCAGGCGAAGAGCACCAAATAAAGGACATGAATACGAATCACTAGGGAATAATTTTAGAGAGTCTACAGCTGTGCCAGTACCTGGTACTAATGCTGAGTTTCAGGCCACTACAGGGGTACGTTATATCATAAACAAAGTGTTAACGGACCTTCTTTTCATTTGAGTTATTTGGGTTTGCCTGACACACCTTTTTCCATGTGATTTTTGACTCCAGAAACCAGGACTGTGTAATGTTAAGCACGTCTCTGAGAAGTACAATTACGAAAAGGATGACGGTTATGGCTTCTCTCGCGAACCTGTAAAGGCAACGTCAACAACACACAATGTATTTTCTCATTCTGGCCAGTCAATGCATCCAAGTGTTTATGGATCCTCACGCACTAGGAATTTGAAAGAGGAAAATGTCCTCATATGCCCTGATCATGCCTTTATATCAAGAAAGTCTGAGTTGAGCAAACATACTTCGTATTGGCAAGGTAGTGCCGCAAAATTGTCAAGATTTTCTAATTCAATTGCAGCTCGAGGTGATTCACTTCTTGAAATGAGTGGTGGTGACTTTAGTGTGAATTCGCAGTTGCCAGAAGATCAATTTGGCACGAGATATAGCCATAAAGCAGATGGTGAGTCCAACCAATTGTTGGATGGACTCAAATCTTAA