Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24013 LG5 70435019 70438686 mitogen-activated protein kinase kinase kinase 1 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/G 70435114 synonymous_variant p.Ser32Ser
G/T 70435195 missense_variant p.Lys59Asn
A/T 70435230 missense_variant p.Gln71Leu
A/G 70435234 synonymous_variant p.Thr72Thr
C/T 70435295 missense_variant p.Pro93Ser
C/A 70435392 missense_variant p.Ala125Glu
C/G 70435416 missense_variant p.Ala133Gly
G/A 70435449 missense_variant p.Arg144Lys
C/A 70435561 upstream_gene_variant
T/C 70435627 upstream_gene_variant
T/C 70435785 upstream_gene_variant
T/C 70436026 upstream_gene_variant
T/C 70436028 upstream_gene_variant
T/C 70436030 upstream_gene_variant
T/C 70436032 upstream_gene_variant
T/C 70436034 upstream_gene_variant
T/C 70436101 upstream_gene_variant
T/C 70436123 upstream_gene_variant
T/A 70436135 upstream_gene_variant
A/G 70436180 upstream_gene_variant
T/A 70436241 upstream_gene_variant
G/A 70436287 upstream_gene_variant
A/G 70436302 upstream_gene_variant
A/G 70436317 upstream_gene_variant
G/A 70436418 stop_gained p.Trp169*
G/T 70436426 stop_gained p.Glu172*
A/C 70436430 missense_variant p.Glu173Ala
C/A 70436436 missense_variant p.Ala175Glu
G/T 70436442 missense_variant p.Arg177Ile
T/C 70436547 upstream_gene_variant
C/T 70436788 upstream_gene_variant
G/A 70436818 upstream_gene_variant
T/G 70436822 upstream_gene_variant
A/T 70436835 upstream_gene_variant
C/T 70436886 upstream_gene_variant
A/T 70436912 upstream_gene_variant
T/C 70436921 upstream_gene_variant
G/T 70436935 upstream_gene_variant
T/C 70436940 upstream_gene_variant
A/T 70436950 upstream_gene_variant
T/A 70436955 upstream_gene_variant
C/G 70436990 upstream_gene_variant
A/G 70436992 upstream_gene_variant
G/A 70437005 upstream_gene_variant
T/A 70437015 upstream_gene_variant
T/A 70437020 upstream_gene_variant
G/T 70437049 upstream_gene_variant
G/A 70437055 upstream_gene_variant
T/C 70437072 upstream_gene_variant
C/T 70437079 upstream_gene_variant
C/T 70437081 upstream_gene_variant
A/G 70437086 upstream_gene_variant
C/A 70437105 upstream_gene_variant
A/G 70437150 upstream_gene_variant
C/T 70437166 upstream_gene_variant
C/A 70437214 upstream_gene_variant
A/G 70437235 upstream_gene_variant
T/C 70437260 upstream_gene_variant
T/C 70437289 upstream_gene_variant
A/T 70437364 upstream_gene_variant
G/A 70437484 upstream_gene_variant
C/G 70437716 upstream_gene_variant
T/C 70437721 upstream_gene_variant
G/A 70437725 upstream_gene_variant
A/T 70437727 upstream_gene_variant
A/C 70437728 upstream_gene_variant
G/T 70437730 upstream_gene_variant
T/G 70437731 upstream_gene_variant
C/T 70437746 upstream_gene_variant
C/A,T 70437748 upstream_gene_variant
C/T 70437755 upstream_gene_variant
C/T 70437756 upstream_gene_variant
C/T 70437758 upstream_gene_variant
G/A 70437785 upstream_gene_variant
G/A 70437787 upstream_gene_variant
A/G 70437789 upstream_gene_variant
A/G 70437800 upstream_gene_variant
C/G 70437809 upstream_gene_variant
A/G 70437812 upstream_gene_variant
C/T 70437839 upstream_gene_variant
C/T 70438106 intron_variant
G/T 70438195 intron_variant
C/T 70438196 intron_variant
T/C 70438417 intron_variant
G/A 70438447 intron_variant
T/C 70438563 synonymous_variant p.Leu365Leu
T/A 70438605 synonymous_variant p.Ser379Ser
G/A 70438631 missense_variant p.Ser388Asn
A/T 70438649 missense_variant p.Lys394Ile
A/G 70438667 missense_variant p.Glu400Gly
T/C 70438673 missense_variant p.Val402Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24013.1
MDSAIRRIDATIKSSSDSILGKGEYRVRGFDSAVDSAVRSRTASNSEIFSVHGFGWTVKNAIQSTTAPDFQTHDSVRSFGCAVENAIRSGAGPNPPPLHSFASAVDEAICSRVVAEAEVEGETEASPNREGYAGSWQKGYMLGRGSFGTVYEAFTDDGNFFAVKEVSLLDHRREGKQSIFQLRQEISLLSQFRHDNIVQYLGTEKDNDKLYIFLEIVTKGSLAVLYQKYQLMDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDATGSIKLADFGLAKITKLNDVKSIGGSLNWMAPEVVNLRSCGYGLAADIWSLGCTVLEMLTRQPPYYHLEEMQVIFQIGGGEPPPVPASLSTNARDFILECLQADPNKRPTVSQLLDHPFVSLCTTVKYGDHSEDVFLH*


CDS Sequence:
>Vu_24013.1
ATGGATAGTGCAATTAGAAGAATTGACGCGACGATTAAGAGTAGCAGTGATTCAATTTTGGGAAAAGGAGAATACCGCGTCCGTGGATTTGATTCTGCGGTGGACAGTGCCGTAAGGAGTAGGACGGCGTCGAATTCGGAAATATTTTCTGTCCATGGATTCGGTTGGACAGTGAAGAATGCCATCCAGAGTACCACTGCACCAGATTTCCAAACACACGACAGTGTTCGTAGTTTTGGTTGCGCGGTGGAGAATGCAATAAGGAGTGGGGCTGGGCCAAATCCCCCTCCTCTGCACAGTTTCGCTTCGGCGGTGGATGAAGCCATCTGCAGCAGAGTTGTTGCCGAAGCCGAAGTTGAAGGTGAAACCGAAGCGTCGCCCAACAGAGAGGGCTACGCGGGATCATGGCAGAAGGGCTACATGTTAGGGAGAGGCTCCTTCGGCACAGTCTACGAAGCATTTACAGATGATGGAAACTTTTTTGCTGTAAAGGAGGTGTCCTTGTTGGATCATAGAAGAGAGGGCAAACAGAGCATTTTCCAGCTTCGGCAGGAAATATCTCTTTTGAGTCAGTTCCGGCATGACAACATAGTTCAATATCTAGGCACAGAGAAGGATAATGATAAGCTGTATATCTTCCTCGAGATTGTAACAAAAGGATCATTGGCAGTTCTCTATCAAAAGTATCAATTAATGGACTCTCAAGTTTCTGCATATACAAGGCAAATTTTAAGCGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAACCGGGTCCATCAAGCTTGCAGATTTTGGTTTGGCAAAGATTACCAAGTTAAATGATGTTAAATCAATTGGAGGCTCCCTGAACTGGATGGCCCCTGAGGTTGTTAACTTGAGGAGTTGTGGATATGGGCTAGCAGCAGATATATGGAGCTTAGGATGCACAGTATTAGAGATGTTGACACGACAACCTCCTTACTACCATTTGGAAGAAATGCAAGTGATATTTCAAATCGGCGGTGGTGAACCTCCACCTGTTCCGGCGTCGCTGTCAACAAATGCCCGAGATTTCATTCTTGAATGCTTACAAGCTGACCCGAACAAACGCCCAACTGTTTCTCAACTATTGGACCATCCATTTGTAAGCCTTTGCACCACTGTTAAATATGGAGACCATAGTGAAGATGTATTTTTACATTGA


Promoter Sequence:
>Vu_24013::LG5:70433019-70435019(+)
CTGTTTATATTCAATTGAAATTCCAATATTAAATCTCGAATGGAGAAAATAACACTTAAATTCATATTTATAATTACATGAATATGTAAATTTTCAAAACATTGCAAGGCTTCTTCTCCAATCTACCAACACAACCTCATTTTCGCTTTATTCTCTAAACAGAGAAGAATATAGGAAGGGAACATAAGTATCTCAGAACAAAAATGATAAATAAGTGAAAGTAGAATAAAAATGATAATACAGGAGAGATAACATAGAAAATAAAAAATTTAAGTAGGAAGAATGTATTATAATTGATTATTATATATGCTCAAAACATAAAAGTAACGCATTTATCATTAATTACATTTACAAGAATATTCAATTATGTGTTTTTAACGGTGACAAGTTTTTCGTACTTTTGACACGTCATAGCAAAAGTTTGCAAAAGTCTGTCTCACATGAATTCCATTTATTCTTTATCTTTCATTTCCGGTTGTATATTAAGTAATTGATTTTTTCATCCGTAGTGAGTCAAATAAATTATTATTATACGCAGGGAAGGATGGTAAAAGTAATGTAACCGTGAGAATTTGTTGATAAAATTAAAGGAAGTTAGTATTTCTGATATTTATTACATGTGATGGTGAGTCTAAATATAATATAATTGAGATATTAAAATGTGTTGAGTGTTGGTATATGATAAAGAATGCTTAATACCACTCTTCTATAAAACGTCAATAAGTATTATTAAAAAAATATCACAATCGTAACAACTCAAAAATTCACAAGAATTTTTTTTTTACATAACTTCTATTTTTATTTTTAAATGTTTTATAATACATTGATTAGAATGGTCAAAATAAATCAATTAATCCAGCACGACCGAATTCATTTGGTCGCTTTATAAATCAATTTAACTTAGTTTACTTGTTAACGAGTAAAAAAATTAAAATCTAATTTAAATTGATAGGTTAAATAAATTAGTTTACTTAATTATATATTTTTTTTCAATAAAAGTTACAAGTTTTTTTAATTAAAATATAAATAAAGTTCAATTCAAATATAATCCAATATTAAATTTTAAATATAATAAATTCAAATACATTTTAAAATAAAAGAATATTTAGTATTTTTTATTTTTTTAATAATTTAATATAGAATTTATTAGTGGGTTGATAAATTAATCTCAATCAGATTCAGTCTAAGTGAATAGGATTTATTTTTGAACCGTGTCAAAATTTATAAATTTTTATTAATTCAACCAAACATAAATATATGATGAACTAGATCCGTAAATTTTAATTTATTTTGATAGTTTTAATATTAATTTAAAAATTTTATTTTAAGAAAATTTATTTTAAAAAAATTACTTTTCACTGAATTTGTCCAGTTTGTGGTTGGATCTCGTTGGGCACAAAGCCAATTCAAAGTAACGAAATAAAATCACTGCGAAGGAAGATATGGAAAATCAAGCTTTTATTTCATACTTTCTAGAACTTCTGCATTTATCCTTTTCCGTTGCATATTTACACAATTGAAATCAATTTATATGTATCTAACACTGTGATTCCTAATTTACCTATTTCAATATCGAATGGGCCAAAGCTTAATCTCATAAGGAATCGATTTGATACAGAATGCAAGTTAATACCAAAAAGTGTCATTGAAAAATATATTCTATTAATTTCTTCTTTCTTCCAGTCTTTCTAACAGCCTCTAAGTTATACTAATTTTAATATATTTTAAAAAATCATGTGCTGCGATTCCATGTGCGAAACACTTAGAACCTTCGTTCCCGCAGCCCTTAATATTCAAAACTTTTCCCTAATAACTCGTTAATATAGTCACAAGTTTCAATGCAAATGCCGCCATGGTTCCTGGTACTTTCCAAAGCAACACTTTCTCTGCTCTTGCATTTGCCTCGCAACTACTGAATTCAACTAATTTCTCTATCTCTCTCTGTCTATATTTGAGTGTGTGCGCCCAAATTGAGCACACACGTTCTTTCACTTTTTAAA


Gene Sequence:
>Vu_24013(+)
ATGGATAGTGCAATTAGAAGAATTGACGCGACGATTAAGAGTAGCAGTGATTCAATTTTGGGAAAAGGAGAATACCGCGTCCGTGGATTTGATTCTGCGGTGGACAGTGCCGTAAGGAGTAGGACGGCGTCGAATTCGGAAATATTTTCTGTCCATGGATTCGGTTGGACAGTGAAGAATGCCATCCAGAGTACCACTGCACCAGATTTCCAAACACACGACAGTGTTCGTAGTTTTGGTTGCGCGGTGGAGAATGCAATAAGGAGTGGGGCTGGGCCAAATCCCCCTCCTCTGCACAGTTTCGCTTCGGCGGTGGATGAAGCCATCTGCAGCAGAGTTGTTGCCGAAGCCGAAGTTGAAGGTGAAACCGAAGCGTCGCCCAACAGAGAGGGCTACGCGGGATCATGGCAGAAGGGCTACATGTTAGGGAGAGGCTCCTTCGGCACAGTCTACGAAGCATTTACAGAGTCTCTTTCTCCTCACTTGCTTACCAATTATTTTTGCTTTTATAAGTTTAACACAAATTTAAAATCGTTTTTTATCATCGATTTATGCCTAAAATAATAATAAAAAGAGCCTTTTTCCTAGGTAAAAATAAGATAGAAAATTATTATTTTTTCTAGATTTACTTTTTTAAAATAATTTTGTTAAAAGAGTGTTTTTATTTTATAATTTTTTTAATAAATTAAATTAATTTATGTAAATGTATTTTAATTTTCCCTTCTGAGTTTTATCAGATTTAGATCATAGTTGCATTTTCTTTTTGTAGTGTTTTTTAAATTCTTATAATTTATTTTTTTGTTTAGTATTGACATGTTTGATAAAATAGAGAATTTTATTTAAGAGAATAAAGTAGTATTCTAAATTTAGACAATTTAATTATTTTTACTATTTATGAACTTGTAATCCTAATCACCCATAGTATGGTTGACATTTACTATCCTCACCTCTAACAAAAGCTTTTCTCACTCAATACACATGTGTGTGTGTATATATATATATATATATATATATATATCATGTGCATGTCTAGAATGTAGAATCAGAATATCCAAAGAATGTGTGTGTGTGTACTACTTAGATAAAATATATCTGGCACATATATTCAACTGAAAATTTGTTTATCGGCTCAGTGGAACCTTACTGCTAATATAGAGAAGCACTTACCAAGTTGATATTAGTTATCTCTGATTTTGAGGATTTCATAGTTATGGAATTCTTCTTCACCCGTAACTGATAAGACTCTACAAATGAGTCAAATTATTTTTGTATGAAAGTTGCACATAGACGATTTAGTTAGTCATCCATTTCCTTCTGTTTTTATTTTCAATGATAACACATACATTTTCTTTTCATACAGTGATGGAAACTTTTTTGCTGTAAAGGAGGTGTCCTTGTTGGATCATAGAAGAGAGGGCAAACAGAGCATTTTCCAGCTTCGGCAGGTGAGAGGAGTTGGTCTTCCCATCAAACTTCGTAACATACTTTATTTTTTCATCAAACCTGTCAACATATTATGTATTTTTTTTCCCATCTTATACAGAAGCATTTGATCATATATGAATATTTTTTGTCTTCCATTCAGGAAATATCTCTTTTGAGTCAGTTCCGGCATGACAACATAGTTCAATATCTAGGCACAGAGAAGGTATAATGCTTTCTAGGTGGCAAGTCTATTATAATTCATGTGTTGGGCATATTTAGAAGTGGGGACGTTAGGCTTGTTTAGTGCGTTTTTATCCAAACATGCATTCATACTTATGATTTGACCATCTCTCTTTGCTCCCCTGAATATGATTGTGATATTTGGGAAATAATTGTTACATTTTTAGGATTGAATAATGTAAATAATCATTATGTACATTTACCAAGCATTTATTTGGCTGAAATTTTATGGTTCATTAAGCCTCTTGAACGTTGATGCAAATGTAATATATGCTAATTGTTATTTACAAAGATGAATAGTCACGGCTATCAAATGATATAGCTTTATTTTTTAAGTAGAAAAAGGAGGGAATCAGATGCCATGGGGAGGGGTTAAAGTATTTTTCTGTTTAAAGCTCATCAAATGTTTTTGTTTTGATATCTTTGAAGTTGTATGAGTCTGATTGTGTTTAAAACTGCAAATGCCAATTAAAGTTTCCCCACGGTGTTTTTTCTTTTAGATTGCTAAGCTTTTTTCTTCTTACGAAGTTCTTCACCCTTAGCAGTTTGACAGAGTTAATACAATTCCCGTCATAATGTCATGTTTCAATGATGCAATAGCTCGTTCATTAGACTATATATATGAATTCCTTCTGAAATAAAAGGATGATTAGTTGGCTGTTTGATCCACGAGTACTTGTACTTTCTACATGACTTGCTTGTGTGTCATTGTTTAGGTGGTGATCCTGAACTATGTTTTGGCTGATTATATTAGGAATAGTTGCATTCCAACTTTTTTTCTCTTCTCTTTATTGTTATGGGTATTTACATTCCATTATTTCTCAGGATAATGATAAGCTGTATATCTTCCTCGAGATTGTAACAAAAGGATCATTGGCAGTTCTCTATCAAAAGTATCAATTAATGGACTCTCAAGTTTCTGCATATACAAGGCAAATTTTAAGCGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGTAACATGAGTGAGGTTTATATCTTGATGCAATGCAACTGTTCTAGCAACCGGGTAAAGTAATGTATAAAGATGAAAAACTCATTAATCCACTGTTTTAAGATTTTAAATAAAGAATTGTGTAAATCTTTTATATGGTTGAACTCAGATATATCATTGGTATTTGTATCTTTCAATTCTTAAATAAACCTAACAAAGGAAATTGATAAAAGAAATAATTTTTAATTTACCTGAACTTGCTACATTCTAATTTTTATTTCATCTAAAATTACTAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAACCGGGTCCATCAAGCTTGCAGATTTTGGTTTGGCAAAGGTACCTTAAGCAAAACCCACTGTACAAAGTCAGCATCTTTGCATAGCAAATTCCAGATGCTAACTGCTTGCAATTGTGTTGTTGGTTCTTTTCGTTTTGTAGATTACCAAGTTAAATGATGTTAAATCAATTGGAGGCTCCCTGAACTGGATGGCCCCTGAGGTTTGTCTCTCTGCCACTGGCATATATGTTTGACAATCACCATTTTCAATCATCTGTAGTTTCGTAATGTGCTAGAATGAGGTTGAATTGTTCGATCATAGGTTGTTAACTTGAGGAGTTGTGGATATGGGCTAGCAGCAGATATATGGAGCTTAGGATGCACAGTATTAGAGATGTTGACACGACAACCTCCTTACTACCATTTGGAAGAAGTATGTCTGATATTTTAAGATTCATCTTTTTCTTCATCCTCTATAAAAACTAAAAAATGGTGCTAATTAATCCTTTTGATTTGTTACAACAGATGCAAGTGATATTTCAAATCGGCGGTGGTGAACCTCCACCTGTTCCGGCGTCGCTGTCAACAAATGCCCGAGATTTCATTCTTGAATGCTTACAAGCTGACCCGAACAAACGCCCAACTGTTTCTCAACTATTGGACCATCCATTTGTAAGCCTTTGCACCACTGTTAAATATGGAGACCATAGTGAAGATGTATTTTTACATTGA