Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23853 LG5 69187714 69192249 PREDICTED: receptor-like serine/threonine-protein kinase SD1-8
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 69187921 missense_variant p.Ile70Leu
G/A 69188004 synonymous_variant p.Leu97Leu
A/C 69188182 missense_variant p.Met157Leu
G/A 69188206 missense_variant p.Val165Met
G/A 69188253 synonymous_variant p.Ser180Ser
C/T 69188451 synonymous_variant p.Ile246Ile
G/T 69188648 missense_variant p.Gly312Val
G/A 69189059 downstream_gene_variant
A/T 69189066 downstream_gene_variant
A/T 69189534 downstream_gene_variant
A/T 69189679 downstream_gene_variant
A/G 69189922 downstream_gene_variant
T/C 69189923 downstream_gene_variant
T/C 69190218 downstream_gene_variant
T/A 69190542 downstream_gene_variant
T/C 69190736 downstream_gene_variant
A/G 69190743 downstream_gene_variant
A/T 69190758 downstream_gene_variant
G/A 69190769 downstream_gene_variant
T/A 69190774 downstream_gene_variant
A/G 69190798 downstream_gene_variant
C/A 69190804 splice_region_variant&intron_variant
G/A 69190808 splice_region_variant&synonymous_variant p.Arg473Arg
T/C 69190810 missense_variant&splice_region_variant p.Phe474Ser
T/C 69190813 missense_variant p.Phe475Ser
G/T 69190833 missense_variant p.Ala482Ser
G/A 69190843 stop_retained_variant p.Ter485Ter
A/G 69190895 stop_lost p.Ter502Trpext*?
T/C 69190898 synonymous_variant p.His503His
C/A 69190906 missense_variant p.Ala506Asp
T/A 69190919 missense_variant p.Phe510Leu
G/A 69190935 missense_variant p.Gly516Ser
A/T 69190946 missense_variant p.Gln519His
T/C 69190949 synonymous_variant p.Leu520Leu
G/T 69190969 missense_variant p.Trp527Leu
G/T 69190979 missense_variant p.Arg530Ser
T/C 69190988 synonymous_variant p.Tyr533Tyr
G/A 69191002 splice_region_variant&intron_variant
T/C 69191004 splice_region_variant&intron_variant
G/C 69191007 downstream_gene_variant
T/C 69191169 downstream_gene_variant
A/T 69191708 splice_region_variant&intron_variant
T/G 69191914 downstream_gene_variant
G/A 69191920 downstream_gene_variant
A/T 69191928 downstream_gene_variant
G/A 69192000 synonymous_variant p.Ser636Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23853.1
MPGLVLFLFWFLASHITISFSSDTLTPTQTLLTNQTLVSPSQVFALGFFSGINSSWYLGIWYNNISNGPIVWVANRDNPLRNSTGFLTIGENKNMVLTTPSGESVWSSNITEANNPILQLLDTGNLVLREENVTDPTNYLWQSFDYPTDTLLPGMKMGWNLDTGVEKHITSWKSEGKDPSSGNYSFKIDPRGIPEIFLWRDDNIIYRSGPWNGERFSGVPEMQPETDSITFSFSYDNHGVYYSFSIGNSSILSRLVVTSGADQLQRLTWVPSSNTWTKFWYAPKDQCDDYKACGSYGLCDSNASPVCTCMRGFSPKNQQAWNLRDGSDGCVRKTNLDCGSDKFLHVEDVKLPETSIVFSNRSMNLEECKDWCRRNCSCTAYANIEVTNGGTGCVTWSGELIDMRQYASGGQDLFVRIAASDAEDTADGSQKSNHIGEIIGITISAAVVIVGLVVIYWKKRKVLGISNVKTTPRGSFQRSRELLTSDGVLSTNRENSGERNMDDIELPMFDFKTLAMATNNFSEANKLGQGGFGIVYRTKPKNPCWTGTDATTLYVTEGNTLRVVGTYGYMSPEYAMDGTFSVKSDVFSFGVLALEIITGKKNRGFYYSNDDMNLLGHAWRHWRDGSALELVDSSIGDSYSPSEVLRCVHVGLLCVQERAEDRPTMSSVMLMLSSESSLMPQPRNPGFSLGKNPAEIDSSSSKQDESWSVNQVTVTLLDAR*


CDS Sequence:
>Vu_23853.1
ATGCCAGGTTTAGTATTATTTCTCTTTTGGTTCTTGGCATCACACATCACAATTTCATTCTCCTCAGACACCTTAACCCCAACGCAAACTCTTCTAACCAACCAAACCCTGGTGTCACCAAGCCAAGTCTTCGCTCTGGGCTTCTTCTCCGGGATCAATTCCTCTTGGTACTTAGGCATATGGTACAACAACATCAGCAACGGACCCATAGTATGGGTTGCCAACAGAGACAACCCTCTTCGCAACTCCACAGGATTTCTAACCATCGGAGAAAACAAAAACATGGTTCTGACAACTCCGTCAGGGGAATCTGTTTGGTCCTCCAATATCACCGAAGCCAACAACCCCATTCTTCAGCTCTTGGACACGGGAAATCTAGTTCTCAGAGAAGAAAACGTAACTGACCCCACAAACTATCTCTGGCAAAGCTTCGATTACCCAACAGACACACTCTTACCTGGGATGAAAATGGGGTGGAACCTAGACACTGGCGTGGAGAAACACATAACCTCGTGGAAAAGCGAAGGAAAAGACCCTTCGAGTGGAAATTACTCTTTCAAGATAGATCCTCGTGGGATACCAGAAATTTTCTTGTGGCGTGACGATAATATCATATACAGAAGTGGGCCTTGGAACGGCGAGAGATTCAGTGGGGTACCAGAGATGCAACCTGAAACTGACTCCATCACGTTTAGTTTTTCATACGATAACCATGGTGTGTACTATTCCTTCTCCATCGGGAACAGTTCTATTCTGTCGAGGCTAGTTGTGACTTCGGGTGCCGATCAACTTCAGCGTCTTACTTGGGTGCCAAGCAGCAACACATGGACCAAGTTTTGGTATGCACCTAAGGATCAGTGCGATGATTACAAAGCGTGCGGTTCTTATGGTTTGTGTGACAGCAACGCCTCGCCGGTTTGCACTTGTATGAGAGGGTTCAGTCCGAAGAACCAGCAGGCGTGGAATTTGAGAGACGGATCTGATGGGTGTGTGAGGAAGACGAATTTGGATTGTGGGAGTGACAAGTTTTTGCATGTGGAGGACGTGAAGTTGCCAGAGACAAGTATTGTGTTTTCGAACAGGAGCATGAACCTAGAAGAGTGTAAAGATTGGTGTCGCAGGAATTGTTCTTGCACTGCTTATGCCAACATTGAGGTCACAAACGGAGGAACCGGGTGTGTTACGTGGAGTGGTGAACTCATAGACATGAGGCAGTATGCTTCGGGTGGACAAGATCTCTTTGTCAGAATAGCAGCTTCTGATGCAGAGGACACTGCAGATGGGTCTCAAAAGTCAAACCATATCGGCGAGATTATAGGAATTACAATTTCTGCTGCGGTAGTAATTGTCGGACTGGTTGTGATTTACTGGAAGAAGAGGAAAGTGTTAGGTATATCGAATGTGAAGACTACCCCCAGAGGTTCTTTCCAAAGAAGTAGAGAATTGCTGACAAGTGACGGGGTACTTTCAACTAACAGAGAAAACTCTGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAAAACCTTAGCAATGGCCACAAACAACTTCTCAGAAGCAAATAAACTTGGACAAGGAGGGTTTGGTATTGTTTACAGGACGAAGCCAAAAAACCCATGTTGGACTGGAACAGACGCTACAACATTATATGTGACAGAAGGAAACACACTAAGAGTTGTTGGAACATATGGTTACATGTCTCCTGAATATGCCATGGACGGAACCTTCTCGGTGAAATCTGATGTTTTTAGTTTTGGAGTGCTAGCGCTGGAAATTATAACTGGGAAGAAAAATAGAGGATTCTATTACTCAAACGATGACATGAATCTTCTAGGGCATGCATGGAGACACTGGAGAGATGGCAGTGCATTGGAACTTGTTGATTCATCAATTGGCGATTCGTATTCACCATCTGAAGTTCTCAGATGCGTACACGTTGGACTCTTGTGTGTCCAAGAACGTGCAGAAGACAGGCCAACAATGTCTTCAGTGATGTTGATGCTGAGTAGTGAATCTTCGCTAATGCCACAACCCAGAAACCCTGGATTTTCCTTAGGGAAGAATCCTGCGGAGATTGATTCTAGTTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTTACAGTCACATTGCTAGATGCTAGGTAG


Promoter Sequence:
>Vu_23853::LG5:69185714-69187714(+)
ATAAACATTCACGTTTTTATACTTTAATAAACTGAAAATTATACCATTTATAAATTTTAAATAAATATATGCTTTCATTATATATAAAATAAATAACATTTATCTTTCTTGTACTATTTAGTGATATGACATTTAATTCTATTATTTTTTTTATAACAGTTAATGTATTTATTGGATTTAATAATGTAATGATGAAGCATGTATAACATTCCTGTAAATTTTTTTTAATAAAATTTATGTATTCAAATATTTTAAATTAAAAAAAATATGTGTTGATCCAGTACATAATAATTACAATCGTGATTTTAATTTCATGATTTCTCTTAATCTAGTTTAAATTCCTCTAGTATAATGTCTACTCTTTGATTCGTAATATAAACAGTAAACTTTGACCTATCTCAAATTTTATCCTAAATCTTAAATACTAACCCAAAATATAAACTCTAACCTTGAACCTAATTCTTAAACCAAAAATCCTAACCAACTAATTGTTTCTTATTTTTATTTATCGTGAGACTTCGTTAAATTCCTATAATATCCTTATTAAATATATAAGTCTATTTACTTATATACTAGTTATTTTAGTTATTTTTAGTCTATGTGAAATTTCAAACTCACATTTAATTATCATAGCTCTTCCTAAATATCATGGTAAGTCATTTTACTATTTTTTTTATCCAATGGAGGGCTTCAATGAATTATAACAATCTTCCCACAATTGATTTTTGAGTTCTTTTTAATTCCATACTAATCTTCTTACTCATTTTTACTTAACGTGGACGTTCATATTAAAAAATTTTCATACAAAGTTTCTTTTATCCTGAACTTATTGTAGTCATTTTTATCCTGAACACTAACTCTAACCGCTTCTACTTATAGTTAACTTACTCAATTTCATCATATACGAGGGTTTAGACCCAAGTTTAGTCATATCAATTTTTGTTTTTCTAGATTTATCCACTAATGTACTAGTTAATTTAATTATATTTACCTTTTCACTAAACTCTAAATTTGAAACTCTAAACTTTAACCATAACTCTTATCCTACATGTCTAAGTTTATTTTTATTTTTATTTTTTTAATAATTTTACTTAGTTGCACATGTCTCGTTTAGATGATCAAATATTTTATTGATGATCAAATATTTTATTGCTATACATTTAAAACTTGAAAAAGTATTTTTATGACTTATAACTTTTTAATTTTTTAAATTTTATTGTAGAATTTTAAAAGAATTATATTAAATACCACTACGTTTCAAGAAAAAAAAAATTTAAGGCTTAATAGTAGTATTAGCTTGCTTTTGTTGGAATCCGCTGTCAGTTTTTTGTGGTAAAAGAAGGCAACATAGATTTGGTGACCTAATTGGGCCGCCGCTGGTTTCACATTTGGAAGAACAAAACGTCATCCACCCAACCCAAAACTAAACCATAGTTACCTTTCTGTATTAATTATTATACTCTATCATCCACTCAGCCTTTTTTACACCTGAAAGAACGTATAAAGTGAATATGATCAATTCATAACAAATATTAACCAGTATTCTAAAAATAACAGTGTTTGAAAAGAGAAAAGATCATAAAAAGTCCTTACTTGAGGCAAAAAAATAAATAAAAAATCAAATATTTAATGTGTGATTGTTTTTCATAAATCAAACTCTTGCATGATTCTGTGGTGATTGATGAAGTGAAAAAGGAAAAACGTACGCAAGAAGAGGCGGTCGTGAGATGAGTCTTCGGAATGGCTAACCATATTCAGACTGTTGACTGATAAAAAAACAGAGTCGCATAAAAGAGCGACTCTGCTTCTCTTTTCAGATTTGGGAAAGCGAAACCTTATTCAACGGAGAAACAACATAGACCAACAAGAAAGAATGCCAATGCCGGGTTCAATTTGGTTTTCTTAGTTTCCTCACTACCCCACACAATACCAAAACTATGAAACTTGTATTTCTCTTCCTTACCAAACACTTGATCAACTCTCCCTCTGCAAACATAACA


Gene Sequence:
>Vu_23853(+)
ATGCCAGGTTTAGTATTATTTCTCTTTTGGTTCTTGGCATCACACATCACAATTTCATTCTCCTCAGACACCTTAACCCCAACGCAAACTCTTCTAACCAACCAAACCCTGGTGTCACCAAGCCAAGTCTTCGCTCTGGGCTTCTTCTCCGGGATCAATTCCTCTTGGTACTTAGGCATATGGTACAACAACATCAGCAACGGACCCATAGTATGGGTTGCCAACAGAGACAACCCTCTTCGCAACTCCACAGGATTTCTAACCATCGGAGAAAACAAAAACATGGTTCTGACAACTCCGTCAGGGGAATCTGTTTGGTCCTCCAATATCACCGAAGCCAACAACCCCATTCTTCAGCTCTTGGACACGGGAAATCTAGTTCTCAGAGAAGAAAACGTAACTGACCCCACAAACTATCTCTGGCAAAGCTTCGATTACCCAACAGACACACTCTTACCTGGGATGAAAATGGGGTGGAACCTAGACACTGGCGTGGAGAAACACATAACCTCGTGGAAAAGCGAAGGAAAAGACCCTTCGAGTGGAAATTACTCTTTCAAGATAGATCCTCGTGGGATACCAGAAATTTTCTTGTGGCGTGACGATAATATCATATACAGAAGTGGGCCTTGGAACGGCGAGAGATTCAGTGGGGTACCAGAGATGCAACCTGAAACTGACTCCATCACGTTTAGTTTTTCATACGATAACCATGGTGTGTACTATTCCTTCTCCATCGGGAACAGTTCTATTCTGTCGAGGCTAGTTGTGACTTCGGGTGCCGATCAACTTCAGCGTCTTACTTGGGTGCCAAGCAGCAACACATGGACCAAGTTTTGGTATGCACCTAAGGATCAGTGCGATGATTACAAAGCGTGCGGTTCTTATGGTTTGTGTGACAGCAACGCCTCGCCGGTTTGCACTTGTATGAGAGGGTTCAGTCCGAAGAACCAGCAGGCGTGGAATTTGAGAGACGGATCTGATGGGTGTGTGAGGAAGACGAATTTGGATTGTGGGAGTGACAAGTTTTTGCATGTGGAGGACGTGAAGTTGCCAGAGACAAGTATTGTGTTTTCGAACAGGAGCATGAACCTAGAAGAGTGTAAAGATTGGTGTCGCAGGAATTGTTCTTGCACTGCTTATGCCAACATTGAGGTCACAAACGGAGGAACCGGGTGTGTTACGTGGAGTGGTGAACTCATAGACATGAGGCAGTATGCTTCGGGTGGACAAGATCTCTTTGTCAGAATAGCAGCTTCTGATGCAGGTACCACCTACATACTAAACATTATTTAACATTTTTCACCGCTATTTATTTGCTTTTATTATTTTAAACACTGTTTAGGAAAACCAAACAGTACTTAATAATGACAAAATTTATGCTTACTTATTCATCTGTTTTATTAAACAATTGTTTCTGTTCTGTCTTCCAATCTTCCATACTCTGTTTCATACCAATTTGGTCGACTGAATTCGAATCGATTGAATGTTGAAACATTTTGAAAGGTCATTTTGACATTAAGCACCTAAACCTGAATGAACGAAAATTTGGAAATTATCTGGACAGATCTTTTGGTATTAAATTTTAGGAGGATTTTTTGTTCAATTTCTTGGTGCCGCCCTAAACTTGTTTCACGTGTGACGTGGCTTCTGACCAAGGGTAGGAAAAAAAGAGAGGTATTTGTCTACAGTGGAAATATGAACGAATTGCACTTCTTCATCACCTTTTTCATTCCAGTGGTTGGGTGACCTAACTAAATAAATTCGAATTCTCTATTTTTTCCTGATATTTTGGCTCACGCCACTTTATTAAAGTACTAATTTTCTAGAATTTGCTGGGCCCACTCACTTTTCTCATATGGGCCCTTAGGAAATGGTGCGTTGTGGGCCGGCGTTTTTGACTCGTTACGTTTTCTTCTGGGCGCCACCGGATGCTATGTTCTTTTCTCAGTCAATGCCTATATCACATTTATCACATCTTCTTTTCGACAATATTAAAACATTTACGATTTCTTTTTCCGAAATTTGCATTTTAATGTTATTGTGTACGAAATTAAGCACGAGATGGATGGAGAGAATAGTACTGTTGATACAACTTACAAGCATGGAATAATTTTAACTACATAAAATTTGGCCGCATTGATATTCTTAGTTTAAAACTTTGTAGCAAGAAATGTCATTGATTGAATTTATTTCACAACTAATTCTATCTATTGTTCATGCTTGAATATGGGAAGCGAAGTGGAGAGATTGAATATGATTAGGCAATGGGAAAAGAGGGTCCTGGATCATGCTAAATTCATAGGTTGGTAGATCTTGGAAAGTGAGGTGCGAAAATTCAAAAAAGATAAGGATCTGGTTTATTAATGAGTATCATCTGCACTGTGGTGGGACTCAAACTTATATTTATACATTTTGGTGGGAAGCATTTCAAGCTGCATGTCTACATCAAAGCAAGCAAAATTCTCTTACTTTTCTTAACCTTTTTGTGAATGTGTTTTCAATGATTCATTTTGTAAGGGAAATAAAAAAATGTACAATAGAAAACTAAGCTAATTTCATCAGTCTCCTTGAGCTGAATTTCTGTAGCTAATCTGCAAGTTACATTTCTGCTTAAGTTTAATTCAGACACACTAATGTTCCCTTGAACACAGTAAATAATGGTGTCACATTTTTTTCAACGAGCTTGTAGGTTTTCCAAGTGACATAATTTTCTGTCTTGAATATTTTAGTTATGTAGTCATCATCTATTTTTTAATTTTGCTAGTATTTACACTGCAAAACCTATTTTGTTCCACTTAGAACAAATACTAAGTGGATAAATGTACTAAAAGAAACCTATGTTTCACAGAGGACACTGCAGATGGGTCTCAAAAGTCAAACCATATCGGCGAGATTATAGGAATTACAATTTCTGCTGCGGTAGTAATTGTCGGACTGGTTGTGATTTACTGGAAGAAGAGGAAAGTGTTAGGTATATCGAATGTGAAGACTACCCCCAGAGGTAATGTTTTTCTCCACGTAAAGTTAAGTTAATGGTATACACGCTGTTGTGGTAGATGATCATCCATTCTTGTTCTTGCCACAAAACCAGGTTCTTTCCAAAGAAGTAGAGAATTGCTGACAAGTGACGGGGTACTTTCAACTAACAGAGAAAACTCTGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAAAACCTTAGCAATGGCCACAAACAACTTCTCAGAAGCAAATAAACTTGGACAAGGAGGGTTTGGTATTGTTTACAGGGTAGGTTTGTTTTTTTATAGCTTCCATAATAATCGATACAGAAAACCTTATACTAATAGGAGTGCTTGTGTGGCTAGCAGGGAAGGCTGATGGAAGGCCGTGATATTGCAGTGAAGAGGTTATCAAAAAACTCATCGCAAGGAGCTGAAGAATTTAAGAATGAGGCCAAGTTAATTGTCAGACTTCAACATCGAAATCTTGTTCGGCTCTTTGGATGCTGCGTTGAGATGGATGAGAAGTTGCTAGTGTATGAGTACATGGAAAACAGAAGCCTTTATTCCATTTTGTTTGGTATGTATTTTTAACATTCTACACCTGAGATTTTTTGTTTTTTCAATGCATGCATGTTTTTGCGTAATCTGGTCTTATTTTTATATCTAAATGCTTTCAGACGAAGCCAAAAAACCCATGTTGGACTGGAACAGACGCTACAACATTATATGTGGTACAGCTAGAGGCCTACTTTATCTGCACCATGATTCCAGACTCAGGATTATCCACAGGGATCTCAAGGCAAGCAACGTTCTACTTGACAGTGAAATGAACCCAAAGATATCAGACTTTGGGATGGCCAGACTTTTTGGCGCGAATCAGACAGAAGGAAACACACTAAGAGTTGTTGGAACATAGTGAGTATCACTTCATTGCAAACCTTACTCTCTGCAAGACCAAATATACCGACCTTATTATTTGTATATTTTTCTCATGGACAGTGGTTACATGTCTCCTGAATATGCCATGGACGGAACCTTCTCGGTGAAATCTGATGTTTTTAGTTTTGGAGTGCTAGCGCTGGAAATTATAACTGGGAAGAAAAATAGAGGATTCTATTACTCAAACGATGACATGAATCTTCTAGGGCATGTAAGTGAGAGTGATACTTAGTTGATAGTATCAAGTTCTGTTAATAAACAATTGATGGTACTTTTATTTTTGCAGGCATGGAGACACTGGAGAGATGGCAGTGCATTGGAACTTGTTGATTCATCAATTGGCGATTCGTATTCACCATCTGAAGTTCTCAGATGCGTACACGTTGGACTCTTGTGTGTCCAAGAACGTGCAGAAGACAGGCCAACAATGTCTTCAGTGATGTTGATGCTGAGTAGTGAATCTTCGCTAATGCCACAACCCAGAAACCCTGGATTTTCCTTAGGGAAGAATCCTGCGGAGATTGATTCTAGTTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTTACAGTCACATTGCTAGATGCTAGGTAG