Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23793 LG5 68698029 68699801 PREDICTED: dof zinc finger protein DOF1.8-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 68698239 5_prime_UTR_variant
A/T 68698338 missense_variant p.Asn10Ile
T/C 68698339 synonymous_variant p.Asn10Asn
A/G 68698674 missense_variant p.His122Arg
T/G 68698765 synonymous_variant p.Pro152Pro
G/A 68698904 missense_variant p.Val199Ile
A/C 68698911 missense_variant p.Asn201Thr
C/T 68698916 synonymous_variant p.Leu203Leu
C/T 68698927 synonymous_variant p.Ser206Ser
A/G 68698928 missense_variant p.Ser207Gly
A/G 68698966 synonymous_variant p.Glu219Glu
G/A 68698976 missense_variant p.Val223Met
G/A 68698995 missense_variant p.Cys229Tyr
T/C 68698999 synonymous_variant p.Thr230Thr
G/A 68699000 missense_variant p.Gly231Ser
C/G 68699004 missense_variant p.Ala232Gly
G/A 68699036 missense_variant p.Ala243Thr
G/A 68699038 synonymous_variant p.Ala243Ala
T/A 68699157 3_prime_UTR_variant
A/G 68699163 3_prime_UTR_variant
A/G 68699164 3_prime_UTR_variant
C/T 68699283 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23793.1
MGLSSKQVSNRGLDWDQTLLQAQNLELPKPTPMRKQQQQTQPSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKKSTTATTTTSNGSMDGELRTHVTIPPLAVDDHHKTTPSSLYQSLCLPQQNPNTKVSEGKDFGIGNGIFLSSTVPFPQNQSLLFPFTTSNSFDTNTCAVSNSLQSSSVYNYGDEFKILEEPTVNSTMACTGAGTRTQPWEIAATSSGLEMSNYWSWEDIDSLVSTDPNNPWDDSDIKP*


CDS Sequence:
>Vu_23793.1
ATGGGGTTGAGTTCTAAGCAGGTTTCTAATAGAGGGCTTGATTGGGACCAGACTTTGTTGCAGGCTCAAAACTTGGAGCTCCCAAAGCCTACTCCTATGAGGAAACAGCAGCAACAGACTCAGCCATCAGAGCCTTTGAAGTGTCCAAGATGTGACTCCATTAACACCAAATTCTGTTACTACAACAACTACAACAAGTCTCAACCCCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTGCGCAACGTTCCTGTTGGCGGTGGTAGAAAGAATAAGCGAGCCAAGAAATCGACCACAGCTACAACCACCACCTCAAATGGAAGCATGGATGGTGAGTTGAGAACCCACGTTACAATTCCTCCTCTTGCAGTGGATGATCATCACAAAACCACACCTTCCTCTCTCTACCAATCTCTGTGCCTGCCACAACAGAATCCTAATACCAAAGTTTCCGAAGGCAAGGACTTTGGTATTGGCAATGGAATCTTTCTGAGTTCAACCGTGCCTTTTCCTCAAAACCAAAGCCTTCTCTTCCCTTTCACAACCTCAAACTCCTTTGACACAAACACGTGTGCAGTATCCAACTCTCTGCAATCCTCCAGTGTGTATAACTACGGTGACGAGTTTAAAATACTGGAAGAGCCAACCGTGAACAGTACAATGGCCTGCACTGGTGCTGGCACCAGGACACAACCATGGGAGATCGCAGCGACAAGTTCTGGTTTGGAAATGTCAAACTATTGGAGTTGGGAGGACATCGATTCGTTGGTCTCAACCGATCCAAATAATCCTTGGGATGATTCCGACATCAAACCCTGA


Promoter Sequence:
>Vu_23793::LG5:68696029-68698029(+)
ATAATTTAATATATTTCCAAATAAAAGTTATTTATCATTTTATATCAATCATAATACTATCTTATATTGACCATAAAAATTTATATTTTTTAATACATAAATATAAGTAAGCAAAATAACAGAAAGTAAGAAAATCATAACATTAAAAAAATTAAATGATAAAAATAATTAAAAATGTATAAATTATATATATTCAATAAAAAAATTAAAATTTAGTGAGAACTTAAAATTCAATCATAAATTTTCTTACACAAAAATAATGTTATAAATACTTATTTTAACTTTTTTTATAAAGTGTTATGATCTCTTAACTTTCTTTCTTCAAGAAGTACAAAATTGACTCTCTTGAGAATTAAGTGACTGCAATTGAACTTAGACCTAATTGGGTGTTTTCTTTTTTTATTTATCCGACAAACATTCTTTGTTTTGTCTTGTAGCGCTTCAGCACGACACTCTTTACCTAACCAACCCACCATTATTGATTTCCCTTCAATTAGTAATCTTTGATGATAAATCAGAACCTCAAATTAGTTAAAAAAATAAATAATATTAGTGTACTTCATGGTTACGGATTCTTTAAGACACTAGTTTATTACAAAACCCTCTCTTTTTAAATTGTAAATGGAATCAAGCACATTTATTTGTTAGATCTTTCTACCACTCGTGGCTTAATTATACATGCATGTGGCTTTGCTTTCTTATTCCCATTAATAATAATGATAACTAATGTTGTGACAGCCATCACCACTAAATTATTACTGTGACTACGCATTTCATTCATGCGTGAAATATATTATTCCAAAACTGGAAAACTACTTGCAAAATGATGAAAATAACGTGCAAAGTACTGTTCTCAATTAGTTTATTCAACGATTCCTATAACTTGTATCTGCTCTGAGGAGATTTTGGAAGAAAAGGTTATGTCTCAGGGCAAACAAGGAAAAAGCACAGCCATGTTTTATCCGGAACTTTTCTTAGATGTTTTTTTTCAATGTGATAATAACGTAAGTTGGCTTGAAACTCACATTATTGAGGCTGTGCGAGACACTTGTGTTATTCTTTGCTCACAAGTGTCGGCTGGTATGAGTCCATTATATATATGAACTCCTGTCAAGACATTCACATACGACACTTTCCACAAGTCATTTTAAAACTCTCTAATTATTCAAATGTTTTTACAATATTTTACCATTAAACTGGCGTAAGGTGAAGTTTGCATCACGTCTTAGATTGACTTTATTTTTAGTCGATGTGAGATTTCTAACTAATACTAGAACAAGAAGTAGACTTAGTGAAAAGAAGATGAAGCATGATAGGAAATGGAAATGGCTTTGTTGTAAGGAAGAAATGAAATCGCAGGAAGCTAACATATAATGGTTGAATGAAGAAGACGGATAGGGCAAAGGAACACGTGCATGCAAGATAGAGATATACCCAACTTAGAACATGTAACATGACATAGGTCCGTAGAACAGCACCACTACTAGATGCATTCTTTCACTTATGTCCCACAAGAAACCATGTGTTGCCAACTGTTTTTAACCTTCCTAAGAATCTTAGGTCCCACTATTACCTCACTTCCCTTTCCTCCAATGTCAATCACTTAAGAGAAACACACCGTAGTGTACTTCCCTTCTTTTTTGCCAACTTTGTGTTTGTATTGGTGGCAAACTTTCCCACTTAAATTATTATAGCACAGCATCATGCATATCTACGTTCCTTTTACACCCAAAACACAAACCACTATCAATGGCCTATAACCCTCCACGTGCCACCCACCCACCTTCACCTTAGGGGTTAAGCATCTCTCCATTCTCCTTTTATAATACTTCTATCCAGAGAACCAAAACTAAACTTGTTACTATTGTCTGCATAAGTTTTATGAGGTTTCATTTTCCTCCGTTACTACCACACACCACTTCAAGTAATTTTTTTCTGGTCTTCTTCCTATAATTATTGATCCTTTACAGATAGATAAGATCTTAAATAGCTATTAGACA


Gene Sequence:
>Vu_23793(+)
ATAGACAGATTGGAGAAAGACATGCTCACTTCTTCTCAGTTTCCTAGGCCTTTCCTTCTATCAAACCTCTCCCACTCACCAATTTCCTCACACCTTCACTGGGTTTGGGCTATAAGCAGCAATCTCATCGCCTTCTTATCCTTCAGATTCATTTCTCTTTTCCCATCTCGATCAAAGGGATAAAATTCCCCAAATCGCCGCCTTTCTCATTTAGTTGTACAGAACAATAAGTCTTTTTTTTCTTCTGGTTAATAGTGCTTTCTGGGGGGTGACTTTAAGATATGGGGTTGAGTTCTAAGCAGGTTTCTAATAGAGGGCTTGATTGGGACCAGACTTTGTTGCAGGCTCAAAACTTGGAGCTCCCAAAGCCTACTCCTATGAGGAAACAGCAGCAACAGACTCAGCCATCAGAGCCTTTGAAGTGTCCAAGATGTGACTCCATTAACACCAAATTCTGTTACTACAACAACTACAACAAGTCTCAACCCCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTGCGCAACGTTCCTGTTGGCGGTGGTAGAAAGAATAAGCGAGCCAAGAAATCGACCACAGCTACAACCACCACCTCAAATGGAAGCATGGATGGTGAGTTGAGAACCCACGTTACAATTCCTCCTCTTGCAGTGGATGATCATCACAAAACCACACCTTCCTCTCTCTACCAATCTCTGTGCCTGCCACAACAGAATCCTAATACCAAAGTTTCCGAAGGCAAGGACTTTGGTATTGGCAATGGAATCTTTCTGAGTTCAACCGTGCCTTTTCCTCAAAACCAAAGCCTTCTCTTCCCTTTCACAACCTCAAACTCCTTTGACACAAACACGTGTGCAGTATCCAACTCTCTGCAATCCTCCAGTGTGTATAACTACGGTGACGAGTTTAAAATACTGGAAGAGCCAACCGTGAACAGTACAATGGCCTGCACTGGTGCTGGCACCAGGACACAACCATGGGAGATCGCAGCGACAAGTTCTGGTTTGGAAATGTCAAACTATTGGAGTTGGGAGGACATCGATTCGTTGGTCTCAACCGATCCAAATAATCCTTGGGATGATTCCGACATCAAACCCTGACAAGAGGAAGTATAAAAAAAAACAATAGTAACCCATGTTCATAGATTAGTTATCTGTGGTGTTTGCGTTTCATAAGGAGTAGAAAGTGTTCGTGTTTTCAAATGAATCATAATATCCACTTTTCTTTCTGCTCTTACGAGTCTTATAAGGAGAAGTTTTGGAGCTGTCTTATTTTAGTTTCAGCTTCGGATTCAAGCAAGGGCGTTCAATTAACTGTAACCAAATGAGTTTGCCTGTTGATCTCTCTTATAATTTCCTGTAATAAAATGTTACACTTAACATTATTCACAAACACAGAAAATTTTGTATTTTTTTGAATGGTTTCTGAGTTCTTTGTCATGGGGTCTGTTCCAGCACACTGAACTGACAGAATGTGATGGAAGATTCTTGCGGATATGTAAATGTGCATGTGTTGGAATGATGTAACATATGGATTTGATTGGCGAAGATTCATCAGCGCCACTTGTTGAGAATCATTGTTTGCTCCTGGGCCATAAGGAATTCTGGTTGCAGAGCTGTTTATTGATATTATGATATTCTGTTACTGTTATATACCTCAAGGATGTTTATGTGTGGGCTTATACTTCACATGCTCTTCTCGTATTTGTTTCTGTTTAATACAACAGTGTATGGCATCTTGGCCCACTGCATTTTC