Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23754 LG5 68375626 68376550 PREDICTED: transcription factor bHLH36-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 68375722 upstream_gene_variant
C/T 68375853 upstream_gene_variant
T/A 68375892 missense_variant p.His150Leu
A/G 68375904 missense_variant p.Phe146Ser
C/A 68375947 missense_variant p.Asp132Tyr
T/C 68375961 missense_variant p.His127Arg
C/A 68376115 stop_gained p.Glu76*
G/A 68376269 upstream_gene_variant
A/G 68376295 upstream_gene_variant
C/G 68376316 upstream_gene_variant
T/C 68376444 missense_variant p.His36Arg
C/A 68376446 synonymous_variant p.Pro35Pro
T/A 68376535 missense_variant p.Ser6Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23754.1
MENNPSPSRVDRKFIERDRRNQMKALFRRLNSLVPHQTSKAVSLPDQVEEATNYIKKLQMNMEKMEKKKNKLLGIERPNVSTNGGGERVGFKSPRIEIRQMGSAVEVVLITGLDSQFMFSETIRVLHEEGLDVVNASYNVIQDAVFHSIHCHQDEKFANGAARISERLKKSIYESSYCAF*


CDS Sequence:
>Vu_23754.1
ATGGAGAACAACCCTAGTCCTTCCCGAGTTGATAGAAAATTCATTGAGAGGGACAGAAGAAACCAAATGAAGGCTCTCTTCCGCAGACTCAACTCTCTTGTGCCGCATCAAACATCAAAGGCGGTTTCACTGCCGGATCAGGTAGAAGAAGCAACAAACTACATAAAGAAATTACAGATGAATATGGAGAAAATGGAGAAGAAGAAGAACAAGCTACTAGGAATAGAAAGACCAAATGTGAGCACGAATGGAGGAGGAGAGAGAGTAGGGTTTAAATCTCCACGGATTGAGATCCGACAAATGGGTTCAGCCGTAGAGGTTGTTCTGATAACTGGGTTGGATTCTCAGTTCATGTTCAGTGAAACCATTCGTGTTCTTCATGAAGAAGGATTAGATGTTGTTAACGCTAGTTATAATGTTATCCAAGATGCAGTTTTCCATTCAATACACTGTCATCAGGACGAGAAATTTGCCAACGGAGCTGCTAGGATATCTGAGAGGCTAAAGAAATCCATCTACGAGTCTAGCTACTGTGCTTTTTAA


Promoter Sequence:
>Vu_23754::LG5:68376550-68378550(-)
AGCATCTGATAACCACAACTTTTTTTCCAACTGACAAACGATGTTTGCCCTGCAACCACATAATCTCATGAAAAAAATCAGAAGGTGGCCCATTGAAAGTCTCAAAAAATTCCCTCGTGTTTCCTTCATATAGTCACAAACGTCAATCTATACACATTTTTGCAACTAAAAAAGTCCTCTAATAACTCAATTTGTTCACCAAGACTCTACTTTCGTAACCCTTCATGCACTTATCACGGCAAATGTGAAACTTTTATATATATATATCCTGCTTACCAAAAGTGTAAATAGTTACAAATATTTTGTAGAAGTGTATCCAAGTGACTTATAAAATTAATAAGATTGCACTAATCTATGTATTATAAATTAGTTTTATTTTTAAGTAAGATAAAATGACACACATTAACATTTTTTTGACATACCTAATAAGAGTAAAATGATCTTAAAAGAGTAAATTTTTGTAGATTTTTTTTAAAAAAAAAGAAAAAGTAGTGTCAAATAAATATAAAAAAATTATGTATGTCAAAATATCATTTTTTATTTATTTTTATGGACATGAGATTTATAACAAATACTTAATAAATTATTGAAAAAATGGAACTATTTAACTTGATAACTTATCGTAGAAATGATAAGAGGTCGAATCAAGTATAAGTAATTTCTAATTGTTTTATTTAAAAAAACATACTCTTCTTGGGATATAAGTGAAAACACATATACTAAATTTCTTTATATATGCAAATATTTATGAGTATTCATAAATTTTTTTATATTTTATTTTTAAAAAGTTAAATAAATTTATTTAAAGTCAAAATTTTAAAATATAAGCTTAAATTAATGAAAAAAATTTATTTTTTCTAAAAAAAAATTAAATATGTTGTGCCAAAAATATAAATTTTAATAAATTAATATTTCATAAAATAACTTCAATATTATTGGTCTAATAATAAAAAAATATAAATATATAAAATCAAATTTTAAATGATTATTATATTATTAATATCTAATAATTTATTTTGATCATTTAAATTTAAGAAAAAACTTAATTAAAATTCACTAGAATAATTATTAGATGATATCATGTATATGTTTGATACCATAATATCCTCGCCTGTCCTATCATGACAATACTCATTAGCGTCTGCAAACAAATATTCATTAAAAATGTCCATTATATATGGGCACAAATTATTTTATCATTCCTACTTATAGTGTTTTAAATATTATTGAGAATAAACATTAATGTAATGTTAATCAACTTATAGAATAGAATATTACATTGTTTTTCTTCAAAGTGAGAAGAATAAGAAAGGTAAAAACATTACAAAAATAATCATATACTTTTTTGTCTGAACTTTAAGTATAAGTTTGTGTGAACTTTAAGTATAAGTTTAACCAGTACATTAAAAAAAAAAGAAATTTAAACATTATAGATGGAAAAAACTTATAACTCTGTTATTTTAAGATTTTGAATTAGAGAATAATGTATATATCTTATATGTATTTAGCTCATATTATATTCAATCTTAAAAATGTGCCAAAGATCCATGATTTTCTACTAAAGTCAACCTAAATTTAGAAGAAAATATACTTACAAGTAATCTCACTAAATCATTTAACATATATTTGAAAGACTATGTATACATACATAATAGAAGGAAAATGTGGTTCAGCATGTGATGAATTTCTTTAGGTAGGGAGGAACGTGTCCCATGATCCAATCGTGTTTGTGTGACTAAAAAGGGAAGTGTTGAAGAAACAAAATTTCATTATTAAGGAAAAGAAACAGTGAAACTTAAGACATAGCCAAAGCTAGCTGGGTCCACCTCCCAATCTCTGAACTTTGATCAGTAGCATCTAATAATATTATCTTGCTTTTCAAAAAGACATTAACGATTCCAAACAATTGACATCATTATATCAGAAGCGTTCTCTTTTGTCATGGGAATGAGCATCTGAAATTACCACACCAATCTGCTGCTGCCACGAATAATACTGAT


Gene Sequence:
>Vu_23754(-)
ATGGAGAACAACCCTAGTCCTTCCCGAGTTGATAGAAAATTCATTGAGAGGGACAGAAGAAACCAAATGAAGGCTCTCTTCCGCAGACTCAACTCTCTTGTGCCGCATCAAACATCAAAGGTTTTCCCCTCTTTCACTTCTCTCAGCTGCTTACATACATTTTATTCAACCAAATATATTGTGCAGGAAACGGTGCTAGTTTCACAACTCTTAATATTTGTGCATTAAAAAACTGTATTATCAATCATTTGCCTTTTTATTTTCTCATTTCTCTTCAAATTCATATTTCTATTTCCATAGATATTACTCTTTTATTTTAATCTGTTGTAGGCGGTTTCACTGCCGGATCAGGTAGAAGAAGCAACAAACTACATAAAGAAATTACAGATGAATATGGAGAAAATGGAGAAGAAGAAGAACAAGCTACTAGGAATAGAAAGACCAAATGTGAGCACGAATGGAGGAGGAGAGAGAGTAGGGTTTAAATCTCCACGGATTGAGATCCGACAAATGGGTTCAGCCGTAGAGGTTGTTCTGATAACTGGGTTGGATTCTCAGTTCATGTTCAGTGAAACCATTCGTGTTCTTCATGAAGAAGGATTAGATGTTGTTAACGCTAGTTATAATGTTATCCAAGATGCAGTTTTCCATTCAATACACTGTCATCAGGTCAGCTCAAATTTCATCTTTCCTTTCCGTATATGCAACTGGGAACATTCTTATGAATACAGTCTCAAACCATAAACCATAAATCGTATCTGATATATAAAATAATAATGATGAAAACATGTCGAGTTATATAATAATTTTTCCAATAACTGAGTCTGACTGCATTGTTCAGGACGAGAAATTTGCCAACGGAGCTGCTAGGATATCTGAGAGGCTAAAGAAATCCATCTACGAGTCTAGCTACTGTGCTTTTTAA