Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23745 LG5 68273002 68274890 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   inflorescence development, inflorescence development, flower development, vegetative to reproductive phase transition of meristem, positive regulation of flower development, regulation of vegetative phase change, positive regulation of flower development, positive regulation of flower development, inflorescence development, vegetative to reproductive phase transition of meristem, vegetative to reproductive phase transition of meristem, positive regulation of flower development, vegetative to reproductive phase transition of meristem, positive regulation of flower development, regulation of vegetative phase change, inflorescence development
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   DNA binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
G/A,* 68273350 intron_variant
T/A 68273488 intron_variant
A/T 68273523 intron_variant
T/C 68273541 intron_variant
G/T 68273545 intron_variant
T/A 68273733 intron_variant
A/T 68273734 intron_variant
T/C 68273953 intron_variant
G/A 68273961 intron_variant
G/A 68274775 intron_variant
T/A 68274778 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23745.1
MVKVLDVMDERQRSRSSSSSISPTFQNFPELMDESWSEGKRRMNYKEEEDDDYEEEEEEEGSEYGEDGRKKRVVTNKRGSKAGGSMPPSCQVDGCNADLSDAKPYHRRHKVCEYHAKAPAVLIAEQHQRFCQQCSRTAYVYTLCSFQSTLARDKTLRDVVCLQEEHRIILNGTYHSVYRMNSILTQGFMSYQNLMNQKGVVEGVWPDITRGVAKMHLNMGIDELEKKEY*


CDS Sequence:
>Vu_23745.1
ATGGTAAAAGTATTAGATGTGATGGATGAGAGACAAAGATCCAGATCATCATCATCATCAATCTCTCCTACTTTCCAAAATTTCCCTGAACTTATGGATGAAAGCTGGAGTGAGGGGAAAAGGAGAATGAATTATAAGGAGGAAGAAGATGATGATTATGAGGAGGAGGAAGAGGAGGAGGGAAGTGAGTACGGAGAGGACGGTAGGAAGAAGAGGGTGGTCACTAACAAGAGAGGCTCCAAAGCTGGAGGCTCAATGCCACCTTCATGTCAAGTTGATGGTTGTAATGCTGATCTCAGTGATGCCAAGCCCTACCACAGGCGTCACAAGGTTTGTGAGTACCATGCCAAGGCTCCTGCAGTTCTCATTGCAGAGCAGCATCAACGGTTTTGCCAACAATGCAGTAGAACTGCTTATGTGTATACCCTTTGCTCTTTCCAATCAACCCTAGCCAGAGACAAAACTCTTAGGGACGTTGTCTGCCTTCAAGAAGAACATAGAATCATCCTAAATGGCACTTACCATTCCGTGTATAGAATGAATAGCATTTTGACTCAAGGTTTCATGAGCTATCAGAATTTGATGAATCAAAAAGGAGTTGTAGAAGGCGTTTGGCCGGACATAACGAGAGGCGTCGCAAAAATGCATCTGAATATGGGCATTGATGAATTGGAGAAGAAAGAGTATTGA


Promoter Sequence:
>Vu_23745::LG5:68274890-68276890(-)
CACCATGCAATTCTTCCTATTCGTACGTGCCCACATACGCCAAAACTTCTTTTCTCATTTCCTTTCAATAATTCACATGCATGCTTTCTTCGTCTCCCCCACCCCTATCTCTTCATCTCACAAATACAACAAAAATTTATTTATTTCTTTTTTTATTATCAAAATTTTTAAAAATCTTTTTTTTTTACTACTCAAAATAGTATAAATATGGAGACAACGTACTTGAGTAAAAACATTATTATGGAATATATATTTTATATCTGGGCACAGAGAGAGGGGTGTGTGAAGGAGGGGACCCCACTTTCTTTTCTTCAAAAATTTGAGCATGGTCTTCTGTTGTCTTCTAATAATTACCACTGCTTTGTGGCTAGATGACAGAAATATTTTTGTCGACACAGACGACAAGCTACTTACACCATGCATTGGTATTGCTGTTTTTTTTTTCATTGTTATTATATTCCTGTTGGATTTTATTTCTTCAATGTGATTGGATGATTCGTACACGTAGAAAAGAACACGATTGGATGACGCTGTATCAGACTTAGTTTTAGTAAAAATAAATCTGTTTTTTTCCAACTTGACCTGGCACAGCCGCCATAAAAGGCAAAAACTTTTCAGTTTGTAATAATAGTATTTTCTAGCAAACTATTATTCAAAATTATAGTAAATACATTTTACTTATTTTATTTACATCATATTTTTCATAAATTATTTTTCTACCCCTATCCGTTATGCTCTCTACTTTATTTTACTTTTATATTTATTTACTTTAAAATTATGGAAAACAAGAGTAAACATCGAGTTTCCCACTTCTCTTGATTGTTGACTATAATTATTTCTCTGCTGTCAGGGAAGATAATCATTATTCTTCTAGTACTCAGAAGAGAAATAAAGTAAATAGAAAAAAAAATAGTAAAGATGGGTAAAAGTAAAGTTAAAATTATGTGTTTGGTTGAAAAAATAAAATAAAAAATAAAATAGGTGAAAAAATAATAAATCTGACTATTTTTAAAATCAAGTATGTTATCTTTGTGGCACACCACACCATCTAATTAATTTCATCCTGTCTTTTATTTTTCTTTATATTTAACCAAACACATCTCAAAAGAATCTGGTTGGATGATTGAGAGCCACTTAAAATGGAAACAGAGTTTTTTTATCAAATAAAAAGGAATCATTGTAGTCCATGTAGATTCTCTAACTAGGCTATCAGCATGTATTATCTAGATAAAATTCTTTTCAAACAACACAAACACCCCAGTCTTCACCTGGTCTTCTTGCACCCTAGTTCACTTTATCTCCGTTTAATTCAGAAGAAAAAGAAAAGAACACAAGATAAAAAAGAATAGAAGAAATAACCGGAAAAAAAATTATTTGCTTTTAATGAAAACAGTGACTGGAAAGAACAATTTCATTTAAATCTTGTTTACTGATAAAAAGTAAAAATCAAAATTTTAAAAGATCCTAATAATTGAGTGATCACAATCTATTGGTTTCATTGATTGCGTTTGTAGTTATGCAAAAACACTTTTTTTTCTCCTACAACAATCACATATATTGTATTTTGTTATTTATATACATACATTTTTTTTGCTTAACTTCTCATTTATTTTTCCTATATATTCACTCATCTTAATTGTTACCTTTTTTTTTTCATACATCAATTCTCTCTTATTTTCCTAGCTTGTCCCATACCGAAAAACTTCGTTAGCATCATTGTAGTGGTCACTGGTTTGTTTGTATTTGATTTAATAAGAGAACTATAAACAATAAAAATAAAGAAAATAAAGTCAAAATAATAGATGCATGTAAATAAGAAGAAAAGTTTATGACAAAAAATTTCTTCGCTGGTTTAGATCAATGAAAACAAAAACGAAAACAAATAAACTATAAAAATATTTAATATTCAACAAAAATAATACAAGTTATGCTGTTTTTAAAATATATATTTTTTGAAAGTAAAAATTAAAAATTACAAAAAAGAGAAAAAAAAAACCGAC


Gene Sequence:
>Vu_23745(-)
ATGGTAAAAGTATTAGATGTGATGGATGAGAGACAAAGATGTATGTAAAATAGAAGGAAGATTAGAAAATATTCAATGTTGTTTCACTATTACCCTGGAAGTGTGAGGTGGCAATCAATTAATGAAGACCCTAAGTGGTCCACACTCGTTCTCTCATTCTATTTACCTTTCTAGTTTTTCTATTTATATCAAGCAGTTGTGGACTAGTCCTTGACTTCTCCGTAACCTTTTCCAGCCAGATCATCATCATCATCAATCTCTCCTACTTTCCAAAATTTCCCTGAACTTATGGATGAAAGCTGGAGTGAGGGGAAAAGGAGAATGAATTATAAGGAGGAAGAAGATGATGATTATGAGGAGGAGGAAGAGGAGGAGGGAAGTGAGTACGGAGAGGACGGTAGGAAGAAGAGGGTGGTCACTAACAAGAGAGGCTCCAAAGCTGGAGGCTCAATGCCACCTTCATGTCAAGTTGATGGTTGTAATGCTGATCTCAGTGATGCCAAGCCCTACCACAGGCGTCACAAGGTTTGTGAGTACCATGCCAAGGCTCCTGCAGTTCTCATTGCAGAGCAGCATCAACGGTTTTGCCAACAATGCAGTAGGTAGGTTGACAACCTTAATCAGTCTTTTCTATGCAATTTAACTGTTCCTTTATGTTTTGTCTGCGGATCCAGCTATATGTGGTTTCTTTAGAACTGCTTATGTGTATACCCTTTGCTCTTTCCAATCAACCCTAGCCAGAGACAAAACTCTTAGGTTATACTTGGTTCAAGTGTCAAAACAAACAGTATATGAAATGTGTCTGAGGTTCTTTTCTGTTTTCATTTCCTTCCTAGCATAGAGCTTTTGGAGAACGTTAACTGACAGTGTCTAACTGTATTGCCTTAGTTCTAAGAAAAAGGATTAACTCCTCCTTAACATAGTCTTGTCGCTGTGTACATTATTATGCATTAAGTGCATTTTTATGGAATGTGTTCAAATCGAAAATCGATTAACCCCAACATTTTGTGCAAAGGTATGAGACATTCTTGATGGCAAACTCTTTGTGCTAAAACAGGGACGTTGTCTGCCTTCAAGAAGAACATAGAATCATCCTAAATGGCACTTACCATTCCGTGTATAGAATGAATAGCATTTTGACTCAAGGTTTCGCTTATATTTTGGTGCCATTGTTTTTAATCCATGAAGTTGACAAGACAAAAAGTGCCGATCTTGTTTCAATCCATCAGATTGGACTATCTTCCATGAAGAGGGAAAATTGGGTTGATTTCAACACAATCTGATTATCAATCATTTTGATTTAGGGTAATACAAACCCATCAATAAATGACACATACATCCATTTCTAAAGAAAACTGCAAATATGTTGATCAAGAACCACCTATTTTTGAAATTTCAAGCTACTTGAATTCTCAAAACGATTTCATATAAAATATTATTTCTTTTTTCTTCTGGGAAAATATAGGTTCAAACATGTCATTCTATAAGGTACGTTTAAATAATTTTCTATACAAGTGTTTACTAAAGAAAAAAAAAATCACAGATGAAATCACCTTATACAATTTTGAATTTTGTAATAAAATTGTCCCATCATACTTTCACAAAAGCCGCTAATTTTACTTTATCTTTTAAATAATATCAAGACCAAATAACTTAGATATTTGAAGGTGTCCTTTTATAATGTGTCCTTTTATAATGTGTCCTTTGATGTTGTTAAAATTTCCTATGAGTTGAGTAAGAAATATTTTGATTTCCCAGGTTTCATGAGCTATCAGAATTTGATGAATCAAAAAGGAGTTGTAGAAGGCGTTTGGCCGGACATAACGAGAGGCGTCGCAAAAATGCATCTGAATATGGGCATTGATGAATTGGAGAAGAAAGAGTATTGA