Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23740 LG5 68213494 68214344 PREDICTED: ethylene-responsive transcription factor 12 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   ethylene-activated signaling pathway, ethylene-activated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, intracellular anatomical structure
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
T/G 68213498 3_prime_UTR_variant
G/T 68213698 3_prime_UTR_variant
C/A 68213773 3_prime_UTR_variant
A/G 68213809 synonymous_variant p.Leu166Leu
G/T 68213910 missense_variant p.Pro132His
G/T 68213962 missense_variant p.Gln115Lys
C/T 68213963 synonymous_variant p.Pro114Pro
A/T 68214001 missense_variant p.Phe102Ile
G/C 68214083 synonymous_variant p.Pro74Pro
C/T 68214089 synonymous_variant p.Pro72Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23740.1
MMASSSSSGSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPAPALCLDLNAPSSDHRWPNVPSRTLVLTEFLHTAVLKDIEPPQPLPPATTALRRPDAGVPLGGGVQVVESSPTASFLGLVRRGIPIDLNEPPPLWL*


CDS Sequence:
>Vu_23740.1
ATGATGGCGTCTTCTTCTTCTTCGGGCTCTCGCGAGGGGCACTACAGAGGCGTCAGGAAGCGACCCTGGGGACGCTACGCCGCCGAAATACGTGACCCGTGGAAGAAGACACGTGTCTGGTTGGGCACATTCGATACTCCCGAGGAGGCCGCCCTCGCCTACGACGGCGCCGCCCGTTCTCTCCGCGGCGCCAAGGCCAAGACCAACTTCCCCCCGGCTCCCGCCCTCTGCCTCGACCTCAACGCCCCTTCTTCCGATCACCGCTGGCCCAACGTCCCCTCCCGTACCCTCGTCCTCACCGAGTTCCTCCACACCGCCGTTCTCAAAGACATCGAACCGCCGCAGCCTCTTCCCCCTGCCACCACCGCTCTCCGCCGCCCCGACGCCGGCGTTCCTCTCGGTGGCGGAGTTCAGGTGGTGGAGAGCTCCCCGACGGCGTCGTTTTTGGGACTCGTTCGGCGCGGGATCCCCATCGACTTGAACGAGCCTCCACCGTTGTGGCTATGA


Promoter Sequence:
>Vu_23740::LG5:68214344-68216344(-)
TTTCATTTTATTAAATTGTGCGCATGGACTCTGCAATAGTACGTCATTTCATTTCAGTCAACCTGATTCTCAAACTTTTGGAATCACTTCTTCTCCAATCGTAGTAATTTGAAGACAGGGATGGTTGGTTCAATTCAGTTTTCTTTTTTTTTAAGTTATCCTTATTTAATAAAAAGCAATGCATTATTAAAATATATTGTTGAGAATATTTTTGTTCTCTTATTATGAGATCTTAATCACATGTGTAAAAGAAAATACTATGTCGGTAGAGATTTTAACTTCATGCCAGCTCAGGTCAAAATACATAAAATGATTTGAAACAGAGTTCATATATCAGGCATTGATATAAGGTCTTTTACAGGCTAAGTGACAACATTAGACATGATCGTTGGACTTGTGATACAATGTTTATCTCAGTGAGGAGAGTTGAATTATTGAGACGAGGACTAAATTATTAGGAGTCTGTTTTGGTGGTGTTAGTTATTTTTGTCTTGGAAGACTCTTCTTCAACCTCTAACTCTGCATGTCCCATCCCTATCTTAGGTCCACAGGTCCAAACTTTACCTAAAGTATGGCTGCCTCTAAATAATATCAAAGGTTAATACCATTTTATTTTGACTATTTTGTAGATTTTATTTATTTATCACAGTCGAGTAAATTTGAACACGAGGCCGTTACAAAACATGATGTATGGTGTCCGTTGAAAGTGGGTTTAGAAGGGAAACCAAAGACAGAGGTGGTAGGGATAGGGATGTTGTTTGATAGAGAGAAACAAGAAGAAAGTAAAGGGTAATGAAAAAAATCGGAGGGAGCACACAAAAAGGAAGAAATAAAAAAGTTGGCGTCCTATCATATCATATCATATATCATATCATGATGATGAGAGTGATGGAGAGAGTATAGAAAGCGAAACAAAAAGGCAAAGTTTAATTAAAAAGGAGAAAAGAAAAATAATGTAAAAGGAGTTGTGGAGAGAATCATCGAAAGATGGTGGAAACAGGAGCAGCGAATATAACTGGATTCCCCATGATCGGCGTTGTAGAAATGTAAGAGTAGTGTGATAATGGAAAAGGAAGGAAAGAAAAAAAGAAAAGAGAAAGTAAATAGAAAAGGATTCACGTGAACATCCGTATCTGTTGTATGTGTAGGCATATAAACTGTGCCCTTCTGCTTGGTGCAGTGAGTCTGAAGTCTGCACACCCCACCCCTGCCATTCACCACTCACTCACTCACACTTTTTATTATTATTATTATTATTTATATATTTATTTATTTATTTTACAGTGGTAAGTAGTAGTAATAAGATGGAAGAAAATAGTAAAGATAAAGAGTTATTAAAGTGAGAGAAAGGACAGAGCCCAACAGAGTCAAACACGCCAAATAGATCAGAGAAGCCCATATTGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGGCCCAACATCACCTGTTCCCTGCAACTCAGACACTCTTCCACGTGGGAGTCTCTGTCACAGCACCAACCCCAACCCCACACTCTCTCTTCCCAATCCCACTCCCCCACCTCTCTCTCTCTCTCTCCCATCCTTTCCCTTTCATTACGTCAACTCAAATTCCCATTCACAATCTCAATCCCAAAAAACACACACATTACTACCATTACCATTCCTCATTTTTTTTAATTAACCCCCTCTAGGGCTTACGTCACTCCTCCTTCCCACACGTCTCATCAGGCGGCGGCTCCACATTCTCAATCCACAGCCGTCCGATTCTACACACCACTCCCTCGTCAACATCAACGGCTCCAATCTAAACTGCCCCTTTTATCCAAATTTGCGACTGTGTGCGTGTGTGTGTTTACGTGTATATATAAACCAAAAGGCAAAGCAAAGCGAGGAAAGAGAAATAGAAAGAGAAGGGAAGTGTGGTGGTGCCGGCCAGCCGACAATTACGGGAGGTTATGTGGGTCCCTCCACTTTTAAATACACACATAGTCATTTGTTGTGTTTGTTCCCTTTTCATT


Gene Sequence:
>Vu_23740(-)
AACGTTTTTTGAGTTTGAGTTGGTACTTTGCGTTCGTTGCATGATGGCGTCTTCTTCTTCTTCGGGCTCTCGCGAGGGGCACTACAGAGGCGTCAGGAAGCGACCCTGGGGACGCTACGCCGCCGAAATACGTGACCCGTGGAAGAAGACACGTGTCTGGTTGGGCACATTCGATACTCCCGAGGAGGCCGCCCTCGCCTACGACGGCGCCGCCCGTTCTCTCCGCGGCGCCAAGGCCAAGACCAACTTCCCCCCGGCTCCCGCCCTCTGCCTCGACCTCAACGCCCCTTCTTCCGATCACCGCTGGCCCAACGTCCCCTCCCGTACCCTCGTCCTCACCGAGTTCCTCCACACCGCCGTTCTCAAAGACATCGAACCGCCGCAGCCTCTTCCCCCTGCCACCACCGCTCTCCGCCGCCCCGACGCCGGCGTTCCTCTCGGTGGCGGAGTTCAGGTGGTGGAGAGCTCCCCGACGGCGTCGTTTTTGGGACTCGTTCGGCGCGGGATCCCCATCGACTTGAACGAGCCTCCACCGTTGTGGCTATGAGTTGTCGGTCCGAGTTCTGACTAGGTTTTTTACGTCGTCGTTTCGTTTTGCTTTCCTTCGTATCTAATTTATCTTGTATGTTTTTAAATTTTCCCTCACCTCGCTTAGGTTTTACTATGAGCCTCGTACGTTCATCGTATCTATCTGTCCATGTGAGTCTATCTAACATTAGGTTAATGGAAGAAAAACGCTATGATATTGTATATACATTTATTTTCCTTATCAATGACTCTACGAATTTTGTAGTAGCGGTACTACTATGTTAGTTCGCCGATCCAGTTAAAGTTGTTTGTGTTGTTAGCAG