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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23652 LG5 67416635 67417939 PREDICTED: receptor-like protein 51
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 67416674 missense_variant p.Phe14Leu
A/C 67416708 missense_variant p.Asn25Thr
C/T 67417003 synonymous_variant p.Ser123Ser
C/T 67417004 missense_variant p.Leu124Phe
C/T,* 67417837 synonymous_variant p.His401His
C/T 67417838 missense_variant p.His402Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23652.1
MKPPPPPRPLPPAFIVLLLLLLLSNPIATSLSLPHPPTPSPTSSPASPETSTTSTLDPKQVIALESLNIPTSRDPCAQPSFHNATICDSSKPFRHLISLRLANCSSYLSLSFTALKSLSTLRSLSLLNCPLSPVRLPPELASSLTSFSSVNGFRHISGVWLSQLPNLTSLTVSGGQIKASGPFVILAHMTKLKTLTISNANLTGSLPGHLHSNLTFIDFSNNRLKGNIPPSITMLDSLQLLNLSSNSLAGEIPSSLGDLISLTNLSLASNSFTGSIPDSISALPSLLHMDLSSNQLNGTIPKFISQMKSLRYLNLANNNLRGVMPFNLTFIKRLEVLKVGGNTNLCYNHSTISSKLKLGISPCDKYGMPVTPPSKDSSADDSTDDDYDDGDGEGIRHKKEHHHGPNKFVLGVAIALSSIVFLIVFLILCSKCCR*


CDS Sequence:
>Vu_23652.1
ATGAAACCGCCGCCGCCGCCGCGACCTCTTCCACCTGCTTTCATTGTCCTTCTCCTCCTTCTCCTGCTCTCCAACCCCATTGCCACATCTCTCTCTCTCCCTCACCCTCCAACCCCATCCCCCACATCATCTCCAGCATCACCGGAAACATCCACTACCTCCACCCTTGACCCAAAGCAAGTGATAGCCCTAGAATCCCTCAACATACCCACCTCAAGAGACCCCTGCGCCCAACCCTCCTTCCACAATGCCACCATCTGCGACTCCTCCAAACCCTTCCGCCACCTCATCTCCCTCCGCCTCGCCAACTGCTCCTCCTACCTCTCCCTCTCCTTCACCGCCCTCAAGTCCCTCTCCACCCTCCGCTCCCTCTCCCTCCTCAACTGCCCCCTCTCCCCCGTTCGTCTCCCCCCGGAACTTGCCTCCTCCCTCACCTCCTTCTCCTCCGTCAACGGCTTCCGCCACATCTCCGGCGTCTGGCTCTCCCAGCTCCCGAACCTTACTTCCCTCACTGTCTCCGGCGGCCAAATCAAAGCCTCCGGCCCCTTCGTCATCCTCGCCCACATGACCAAGCTCAAAACCCTGACCATCTCCAACGCCAACCTCACCGGATCCCTCCCCGGCCACCTCCACTCCAACCTCACTTTCATAGATTTCTCCAACAACCGCCTCAAAGGCAACATCCCCCCCTCCATCACCATGCTCGACTCCCTCCAACTTCTCAACCTCTCCTCCAACTCCCTCGCCGGCGAAATCCCTTCCTCCCTCGGAGACCTAATTTCCCTCACAAACCTCTCCCTCGCTTCCAACTCCTTCACCGGCTCCATCCCCGATTCCATTTCGGCCCTCCCCAGCCTACTTCACATGGATCTGAGCTCCAACCAACTCAACGGAACCATTCCCAAGTTCATTTCTCAAATGAAGTCTCTGAGGTACTTGAATCTCGCCAACAACAACCTCCGCGGCGTTATGCCCTTTAACCTCACTTTCATCAAGCGATTGGAGGTCTTAAAGGTTGGTGGCAACACTAACCTCTGCTACAACCACTCCACCATTTCTTCCAAATTGAAGCTCGGCATCTCTCCCTGTGATAAGTACGGAATGCCGGTGACTCCGCCCTCTAAGGATTCGTCCGCAGATGACAGCACTGACGATGATTACGATGATGGTGATGGGGAGGGGATTAGACACAAGAAGGAGCACCATCATGGTCCTAACAAGTTCGTTCTCGGTGTCGCCATTGCCCTCTCTTCCATTGTCTTTCTCATTGTTTTCTTAATCCTCTGCTCCAAGTGCTGTCGTTAG


Promoter Sequence:
>Vu_23652::LG5:67414635-67416635(+)
TAGACAAAAATATCCTTATATATAATGGATTATAAGTTTTAAGGTTAAGGGTATTTTAATAATTTTCATTCTCAAAACTAAAAAAAAAAAAAAGAAACCCCCAAACCCTTACTCACCTCTCTCGTTCTTCTGAACCCTTTCTCTTTCATCTTTCTCACATGAGTTTTCATCTTATAATTTTTGTCTTATATAATTTTATCCAATTTTCACAAGCATAAAGGAATTGGTAATTGACCTGGAAAAAATCAGAAATACTCGCTGTTAAACAATTTCTTACAAAAAATGATTTTATAATGAGTTTTTATTTTATAATTTTTGTCTTTATTTAATTTTATCTAATTTTCACAAGTATAATGACATCAAAGGAATTGGTAATTGGCCTGGAAAAAAAATCAGAAACACTCGTTCTTAAACAATTTCTTACAAAAAATGACTTTATAATGAGTTTTCATTTTATAATTTTTGTCGTATATAATTTAATCTAATTTTCACAAGCATAATGACATCCAAAAGAATTGGTAATTGGCCTGGAGGGTTTTTTTAGAGATGTTGATTCAACATATGCAGATGATGAAATTAGGGAGGTTAGTAAAGATGGTGAAATTGAAGAGATCTTGAATGAACCTTTGCCTGAAGGTGATATGTCAATAACTCAACTCTTTACAAAGGCAAATTGTTTAAAGGCAAGTGTTTATGATTTTTTCAATTGGAGCTATAGTAGGAATGACAGAGAAAAGGTTGGAGTGAGAGAGATGAAAGAGAAAGGATGAGAGAGGTGAGTAAGGATTTGGGGGTTTCTTTTTTTTTTTTTTTAAGTTTTGAGAATGAAAACTATTAAAATACCCATAACCTTAAAACTTAGAATCCATGATATATAAGTGTATTTTTGTCTACTAAAATTCGGTACACATTGCTAAAATGTACCAACTGAAAAATAGGCGTACGCGCGTTAACAAACCCCTTATTTAAAACTATATTTATAATATTTATTAAATAATAAAATAATTACAAGAAATATATTGTGTGAAGAACAACCCAATAGATACTGTCATCTATAAGAGATTATAAGGCAAGTTCCTTGTAAAAAAAATTCAAAGACCCAAGGTTATACCATATTTTAAAAATAAAAAATATACTAATTTCACTTATTTTATTTCCTAACTTTTTAACTTAAATAATAAATATGTCCGCATTACAATTTAATTGAATATGTGAGCATATAGCGAAATAGAATTTGATGAAATTAAATGACACTGAAATCCTTGTAAGCACCAATTAAAGAATGTTCTTGTCACAAATAATAATTTAGCGAAAAATGTTTATATGAATGAATTTGTTTTAATTAAAAAAAACATTAAACTTTAAAGAAGAAGAGTTGTAATAAAAAGAAATAGTGTATGTCCTTAACAATAAAATCTAATCACGGAGTACCTCTAAGATACCCCTCCAACCCTAATTTAAAAACATGCCCACCCATTCTTTAATATTTCATTCTTCTCTTCTCTGTCATTTAAAATTCCCCATCTTGACCGTTGTTCCTTCAAACCGCTCACTTCCCAATTTACACTTTTCTAATTTCCCCCAAATCAAACACGTCTGCTTAAATAACCTAACATCATTTTCAATCGGTTTTAACTCCTCTACTCAAATACGTAATTTTATATTACACTTTATGAAAATCTTCTCATGATTTTAAGTTAAACATACCTTCATTTTTTTCATTACATTTAAAAAACCTAATTATTTATTAGTTGTGCTATATCTAACTTTTCATTGATTTATATTAAAGATATCTTTCAGCCACGGTGGAAAACTAATTTCTTTCTAATAATAGAGTAATTTTTTTGTTTTCAACAAAGTTTCTTTTTTAGTTGGAAGAACTTTATTATTATATACTACAGCTACATGTTACCTCTGTTTTCTGCTCTGTCACTCACTTCAGAGTTCCCACACTAGACTTCATTCTCGTAATCTCATGTGTTCCTGACAAACCACCACCA


Gene Sequence:
>Vu_23652(+)
ATGAAACCGCCGCCGCCGCCGCGACCTCTTCCACCTGCTTTCATTGTCCTTCTCCTCCTTCTCCTGCTCTCCAACCCCATTGCCACATCTCTCTCTCTCCCTCACCCTCCAACCCCATCCCCCACATCATCTCCAGCATCACCGGAAACATCCACTACCTCCACCCTTGACCCAAAGCAAGTGATAGCCCTAGAATCCCTCAACATACCCACCTCAAGAGACCCCTGCGCCCAACCCTCCTTCCACAATGCCACCATCTGCGACTCCTCCAAACCCTTCCGCCACCTCATCTCCCTCCGCCTCGCCAACTGCTCCTCCTACCTCTCCCTCTCCTTCACCGCCCTCAAGTCCCTCTCCACCCTCCGCTCCCTCTCCCTCCTCAACTGCCCCCTCTCCCCCGTTCGTCTCCCCCCGGAACTTGCCTCCTCCCTCACCTCCTTCTCCTCCGTCAACGGCTTCCGCCACATCTCCGGCGTCTGGCTCTCCCAGCTCCCGAACCTTACTTCCCTCACTGTCTCCGGCGGCCAAATCAAAGCCTCCGGCCCCTTCGTCATCCTCGCCCACATGACCAAGCTCAAAACCCTGACCATCTCCAACGCCAACCTCACCGGATCCCTCCCCGGCCACCTCCACTCCAACCTCACTTTCATAGATTTCTCCAACAACCGCCTCAAAGGCAACATCCCCCCCTCCATCACCATGCTCGACTCCCTCCAACTTCTCAACCTCTCCTCCAACTCCCTCGCCGGCGAAATCCCTTCCTCCCTCGGAGACCTAATTTCCCTCACAAACCTCTCCCTCGCTTCCAACTCCTTCACCGGCTCCATCCCCGATTCCATTTCGGCCCTCCCCAGCCTACTTCACATGGATCTGAGCTCCAACCAACTCAACGGAACCATTCCCAAGTTCATTTCTCAAATGAAGTCTCTGAGGTACTTGAATCTCGCCAACAACAACCTCCGCGGCGTTATGCCCTTTAACCTCACTTTCATCAAGCGATTGGAGGTCTTAAAGGTTGGTGGCAACACTAACCTCTGCTACAACCACTCCACCATTTCTTCCAAATTGAAGCTCGGCATCTCTCCCTGTGATAAGTACGGAATGCCGGTGACTCCGCCCTCTAAGGATTCGTCCGCAGATGACAGCACTGACGATGATTACGATGATGGTGATGGGGAGGGGATTAGACACAAGAAGGAGCACCATCATGGTCCTAACAAGTTCGTTCTCGGTGTCGCCATTGCCCTCTCTTCCATTGTCTTTCTCATTGTTTTCTTAATCCTCTGCTCCAAGTGCTGTCGTTAG

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This project is funded by the Department of Biotechnology
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