Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23551 LG5 66462938 66465278 PREDICTED: protein kinase PINOID-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 66463001 missense_variant p.Pro316Gln
G/T 66463146 synonymous_variant p.Arg268Arg
G/A 66463199 missense_variant p.Pro250Leu
T/C 66463553 stop_lost p.Ter132Trpext*?
G/A 66464114 intron_variant
C/T 66464158 intron_variant
A/G 66464159 intron_variant
T/C 66464218 intron_variant
T/A 66464224 intron_variant
G/A 66464230 intron_variant
A/G 66464659 intron_variant
C/T 66464986 intron_variant
G/C 66465177 synonymous_variant p.Thr34Thr
C/T 66465263 missense_variant p.Ala6Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23551.1
MLIETACARDSGMSSETVNSTQRTSMSNESVCSTSFSRLSFDLPPSSSSPESLFVKPHRSSDFAYSAIFRRKFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVESPDSSLDPAFTRTLPYTRQYSTPFSCLSNRVFRSKKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIFEMVYGRTPFAGSSNEATLRNIIKNPLAFPTATPSTTLEMHARDLISGLLNKDPNRRLGSKRGAADVKKHPFFAGLNLALIRMVTPPEVPSLRRQKTTLFYPANDNGNVNNSRHELTAFDYF*


CDS Sequence:
>Vu_23551.1
ATGTTAATTGAGACTGCCTGTGCTCGGGATTCTGGGATGAGTTCAGAGACCGTCAATTCCACGCAACGAACTTCCATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGCCTCTCCTTCGACCTCCCTCCTTCCTCCTCATCGCCCGAGAGCCTCTTCGTCAAGCCCCACCGCTCCTCCGACTTCGCTTACTCTGCCATCTTCCGCCGCAAGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTATCTCCACATGCTGGGAATAATCTACAGGGATCTAAAGCCAGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTGTGCTCCCATGCAATCCCCGCCGTTGAATCCCCTGACTCTTCTCTAGATCCTGCATTCACACGCACGTTACCCTACACCCGTCAGTACTCCACTCCCTTCTCCTGTCTCTCCAACCGCGTCTTCCGCTCCAAGAAGGTCCAAACCCTACAACCCAACCGCCTCTTTGTGGCCGAACCGGTTGGGGCTCGCTCCTGCTCCTTCGTGGGGACGCACGAGTACGTCTCACCGGAAGTGGCCTCCGGAAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTCGGAATATTCATCTTCGAGATGGTGTACGGTCGCACCCCCTTCGCGGGCTCATCGAACGAGGCTACGCTGCGGAACATCATAAAAAACCCCCTCGCCTTTCCCACCGCCACGCCCTCCACCACACTTGAAATGCATGCGCGGGACCTCATCTCCGGGTTGCTCAACAAGGACCCGAACCGCAGGCTTGGGTCGAAGCGCGGCGCCGCCGACGTCAAGAAGCACCCTTTCTTCGCGGGGCTCAATCTGGCGCTCATACGAATGGTGACGCCGCCGGAGGTTCCCTCCCTCAGAAGGCAGAAAACGACGCTGTTTTACCCCGCTAACGATAACGGCAACGTAAATAACAGTAGACACGAGCTAACGGCGTTTGATTACTTTTGA


Promoter Sequence:
>Vu_23551::LG5:66465278-66467278(-)
TTAATAGTCTTGAATAGATTTAATTTCATAAAATTAGGTAACCCGTACACATCTGAAGTGGTCGAAACGTGTTTAACGTCGTGCTAGAGCGATAATAAGCATTACCAACCTGTTTCTAAACTTATCAAAGACGAAGGATCGTCCTTAACATTGGATATTAAAAATTGGAAATGTAAAAAATCACAACTAAAGCGTGGATAGAACTTTTGGAAATAAATGTTGACTGAAGCAGTTGATCAGAAGGTGCTTTTACTGTGGCTAAAACGAACTTTTGCACTAAATTTTTAACATAAAATTATTGTACTAGAATGTAACACTAAACACATGCAAAATTTGGGGGCACAAGGGCCTTCCTTTGGCAGAGAAAGAAAAAATGGCGAACAGCTCATATTGTCGTAGAAAAGATTATACAAGGCAGAAGTGTAAGTAAGTGTGTGTGTGTATAAATATTGTTGAAGAATTGATTTTGCAACGTGTGGTGGAAGCTAAGAATTTTGGTTGGGGAAGAACGTTAAGAGCGAAAAGTGTGGGACGAGAAGATTCCCATGCAGATGCAGTAGCTTGAAAAGGTTAAAAGTCTGAATTAGAGAGGTCAGATCAGCACTTACGTTTGGGCCAATGTGGTACTGTTGATCGGTCCTACCACTGTTGACAATGTTTTTAATTGTTAGTACTTGCGTCCAAAAATGCCCCACATTTTTCTCTCACATTCAACTTCTGCCCAAAACTCTGCTCTACCATTCGTATCTATAGATTAACACATTTGATTCAACATTATCACTCACTATGTCTCTGCATCTACAGGCATTACTTTCTCCTTCACCTCTCTCTTTTCATTTCATATCACTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTTCTTCTTTTTCCTTTACCTACATCTAATCAAAATTTATTTTCGCTCCAATTCAACTTAATACTGTTCTACTTCACTACTTCTACTTCCAACAGTACAACAAATCTTTTAACATATTTTCTGCACTAAATTCGAAACCGTCTGGAAAGGATACAAATTCCCAATTTCTAAGCCACATAGTTCAAGCCGCTTTAACTCTTCTCTATAATCTATGCTTTAGTTTTTCAAGTCCATGTTTTTGTTTCGTCAGACGAAAAAAAAAACAAAAACTATGCTTGCTCTAAAGAGGAGTTACGTATCAAAAGGTGTGACCAGGTTTGAAAAGAATCAGGCCTCCGTACCTTTTTTTTATTGTAGAAATGGATTGACTCACTAACTATTGAATTATAGTTAGTTCCAATTTATTATCAACTTGTATCATGTCGGTATATATATATATTCAATGCTTATAACTTAGGTGTAGTGTAGGGGCCTAGTTACTATTATTTGTCCACGCAAATCTTTTCCTTTTAAAATAATACAAATAACTAATTCATTGATTATATATACATATATATATATATATATGACAAGTGAAGGAAATAACTCGAAGCCTTCTCCTACTTATTCTCAAATTTTTCACATCTCTAAAGTAAATTTAGATGTAAAGTGAAAGAATGACTGTTGTTGATGTTATTATATTTCACATTTGGAGATAGGGTGAAAATAAGAAATGAATTTATTTGGTAGCAGGTACATGCATGTGTTTAGTCCAATAATATTTATGCTGGGTTAAAGAATAAAGCAGAATTGAATAGAAGCCGATATTTTGCGTTTAGTGAGAGAGAAACACGGTTGATCCTGTAGGGCAGGTTTGTCACTGAAATAATGAGTGAGAGGAAAAAGAGAATCGGAAAAATAGTGGAAAAAAAAAAAGAAGCTTAACATTAACAAAGAGCGGTACTACACGTCCAGGCCCACATCGCTTAACCAACCAATCCCTGCATTTCCAAACCAAAGCAACTGAACTGCACTGCACCTTCCCATAAATACCACACAACCACCCCTACTTCTTCTCTCAAAGCTTCTCTCTCTGTAATTTCTATGAACCCTAGGTCCCTTCTTTTCGCTGTTCTGGTTCCACC


Gene Sequence:
>Vu_23551(-)
ATGTTAATTGAGACTGCCTGTGCTCGGGATTCTGGGATGAGTTCAGAGACCGTCAATTCCACGCAACGAACTTCCATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGCCTCTCCTTCGACCTCCCTCCTTCCTCCTCATCGCCCGAGAGCCTCTTCGTCAAGCCCCACCGCTCCTCCGACTTCGCTTACTCTGCCATCTTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCTGGCGACATCGGCACCGTGTACCTCTGCCGCCTTCGCCACGACGAGGACGAGTGCTTCTACGCGATGAAGGTGGTGGACAAGGAGGCCGTGGCGCTGAAGAAGAAGGCGCAGAGAGCGGAGATGGAGAGAAAGATTCTGAAGATGGTGGACCACCCCTTCCTCCCTACGCTCTACGCGGAGTTCGAGGCCTCGCATTTCTCTTGCATTGTGATGGAGTATTGCTCCGGTGGAGACTTGCACTCCCTTCGACACAACCACCCTAACAAACGCTTCTCTCTCTCCTCTGCCAGGTAACTTACTCATCGCCAAGCTTTCTTGCTTTCTTCTCCTTCTTTTGTCGTCATCATCGTCATCATCCTCGCCTCTTCTCTCCCTTTCTTCCTTCAGTAATCTCACTTTTCCCAATCTAATACATTTTCCCTTTTGTCTTTTCATCTGCAAATTCCTCTTCCCATCAAAAAATAATTAATAGTTTTTTACTTCTTTCAGACTTGTCATAACATGATTTATACTTTATTGTTAATTAAAGTCAACAGCTTTACACTCCTGTAATTCAGTCCCAGCTCAACACATACATCTGTAGCTGTCGCTCTTTGAATATAAAATTTCAATTAATGTTATAACTTTTCTTTTAGAACCTGGTAAACATGTCTTTAACTATGGGTATAACAAAATACCACCTTTCAAAACTGGTTTTTTAATGCCTGCATTTAGTGGAATAAAGAAAGTGGGCTTGTGGCTTCTTGTATGAATTTTATTTATAAACTAAAAAAAAGTAAAGTATCAAACAATGTTTAATATTAGAACAAAAATCTAGTTAAGCTGGTTTTTTCTATCATACAAGGTTTAAATAATTGATTATTTATTTTTCTCACTTGGTCTAATTATTATATTTTTAATCTCTTCGCTCATCGCTTATACTTTTTTATTATTTCTGAACATAAAATATTCATATTAGGGTTATTTTTTATTTTTAATATAGGAAATTTGTAATTTTGGAGTAACTTTGTCTTTTATATTGTTATTGCAGAATCTATAATTAGAATATATGATGCAGAGAAATGTTAATAATATTATAAATTTAAAGGAAGTTGTTAAGATATGTTGATAATTGAATGAGTGTGAAGAGTATAAGAAAAAAGGGAAAAGAATAGAGTGGATGAAGATAGGTAGAAAATGATGAGAGGGGAATAGAAAGAAGGGTTTTGTTAGTTTGGAGAAAGATATATAGTTAGTGTTTATTAATAGTTGCACATGCACTAATATTCTTGTTTGTTACAGGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTATCTCCACATGCTGGGAATAATCTACAGGGATCTAAAGCCAGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTGTGCTCCCATGCAATCCCCGCCGTTGAATCCCCTGACTCTTCTCTAGATCCTGCATTCACACGCACGTTACCCTACACCCGTCAGTACTCCACTCCCTTCTCCTGTCTCTCCAACCGCGTCTTCCGCTCCAAGAAGGTCCAAACCCTACAACCCAACCGCCTCTTTGTGGCCGAACCGGTTGGGGCTCGCTCCTGCTCCTTCGTGGGGACGCACGAGTACGTCTCACCGGAAGTGGCCTCCGGAAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTCGGAATATTCATCTTCGAGATGGTGTACGGTCGCACCCCCTTCGCGGGCTCATCGAACGAGGCTACGCTGCGGAACATCATAAAAAACCCCCTCGCCTTTCCCACCGCCACGCCCTCCACCACACTTGAAATGCATGCGCGGGACCTCATCTCCGGGTTGCTCAACAAGGACCCGAACCGCAGGCTTGGGTCGAAGCGCGGCGCCGCCGACGTCAAGAAGCACCCTTTCTTCGCGGGGCTCAATCTGGCGCTCATACGAATGGTGACGCCGCCGGAGGTTCCCTCCCTCAGAAGGCAGAAAACGACGCTGTTTTACCCCGCTAACGATAACGGCAACGTAAATAACAGTAGACACGAGCTAACGGCGTTTGATTACTTTTGA