Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23164 LG5 62887060 62888079 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 62887744 synonymous_variant p.Lys112Lys
C/T 62887779 missense_variant p.Gly101Ser
G/A 62887807 synonymous_variant p.Pro91Pro
T/C 62887882 synonymous_variant p.Glu66Glu
G/A 62887953 synonymous_variant p.Leu43Leu
C/A 62887969 synonymous_variant p.Thr37Thr
G/A 62887977 stop_gained p.Gln35*
G/A 62888054 missense_variant p.Ala9Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23164.1
MSSNNVDKAILFSLDDLEKATDNFNVDRVLGKGGQGTVYKGMLVDGRIVAVKKFKVEGNIEEFINEFVILSQINNRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHDQTKELLPMTWEMCLRIATEIAGALFYLHSVASKPIYHRDIKSTNILLDEKYRAKIADFGTSRVISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGQKAISPARSGEFKSLASYFVECLEEDNLFDIIDKRVMKEAEKGQIIAVTNLANRCLELNGKKRPTMKEITLELEGIHGLVRKCNAEKKGDEVELARVGILGMDILRQSHGTQKVVPMVQ*


CDS Sequence:
>Vu_23164.1
ATGTCATCTAATAATGTGGACAAAGCTATTCTCTTTAGCTTAGATGATTTAGAGAAAGCCACTGACAACTTTAACGTGGATAGAGTTCTGGGAAAGGGAGGGCAAGGTACGGTTTACAAAGGAATGCTAGTAGATGGTAGAATTGTTGCAGTGAAAAAATTTAAGGTGGAAGGAAATATTGAAGAGTTCATCAATGAATTTGTCATTCTCTCACAAATCAACAACAGAAATGTGGTCAAACTGTTAGGATGTTGTTTGGAGACAGAAATTCCCCTACTTGTTTATGAATTCATTCCTAATGGTAATCTCTTTGAATATTTGCATGACCAGACAAAGGAGTTATTACCAATGACTTGGGAGATGTGTTTGAGAATTGCCACTGAGATCGCAGGAGCTCTCTTTTACCTGCACTCGGTTGCATCTAAACCCATTTATCATAGAGATATCAAATCCACAAATATACTGTTGGATGAAAAGTATAGGGCAAAAATTGCAGATTTTGGAACATCCCGGGTAATTTCTATTGAAGCTACTCATCTTACAACAGTTGTTCAAGGTACCTTCGGTTATTTGGATCCTGAATATTTTCACACTAGTCAATTTACAGAGAAAAGTGATGTCTATAGTTTTGGAGTAGTTCTTGCTGAACTTTTAACAGGCCAAAAGGCAATATCACCAGCAAGATCTGGAGAGTTCAAGAGTCTAGCATCATATTTTGTTGAGTGTCTGGAGGAGGACAATCTGTTTGACATTATTGACAAAAGAGTTATGAAAGAAGCAGAGAAGGGACAAATCATTGCCGTTACTAATCTTGCAAATAGATGCTTAGAGTTGAATGGAAAGAAACGTCCAACTATGAAAGAGATCACACTTGAATTAGAAGGGATTCATGGGTTGGTCAGGAAGTGTAATGCAGAGAAAAAAGGTGACGAAGTTGAGCTTGCACGAGTTGGCATCCTTGGGATGGATATTCTACGTCAAAGTCATGGTACTCAAAAGGTTGTACCTATGGTACAATAA


Promoter Sequence:
>Vu_23164::LG5:62888079-62890079(-)
TCATAACCGAGTTGCCCTTCTCCATCATTTAAGTCATGCTTAGTATATTGCTCTTGAGATTACGTACATAGTACATGTCTTTAATTTCTCCAACTTAGTCATTCTTTTGCAAGTACCAAAATTTACCTTACCTTTTTACCGTCACCTTGAAGTCATTTCCAAATGATACATGCTCGACCTTTTCTTTGGATTATCAAGATACCAAACCGAGTTGTTTGAACAACTCAAACTTAACTCGACACCTGATCGCTTAAACTTAGCTTGGCTTTCAATCTCATCGCCATCATATAATTTGGACTCAGCTCGACATTCAATCTCCTCGACATCATGAATATCTTCGTTTCTTCCTCAACTTCTTCAATAAGGAAGTTTGTCTCCTTCTTTCTCTCAAACTGGCAATACTTCACGAAGTGAATGACATTCCCACAATTATAGCATTTGATAAATTTACAAACATTTGCATAGTGGTTGTACTTGCCACATTGAAAGTAGTCAACTCCTAAGTTGCTTGACTGACCGACATCGACCTCTCTCTTGTCCTTAACCAAATCAATTTTGTAGATTAGATTGCTCTTTGTAAGCTTCATAATCATCTCGGCCTCGACTTCCTCATCCTCAACTTTCTCGGCCTCTTCCACCAGGACATCGGCCTTAATTGTTCCCAGCTTCTCCTTACACGTCAAACTTTGCTTAAAGTGCTTGATCAAGTAGCTCCAACTTCTTTTTCCTACTCTGCTGCTCATGTGCTTCAAGCGACCCGATAAGCTCTTCAACCGAGAGCATCGACAAGTCCTTGGACTCTTTAATGCACAAACGATATTCTCAAAGTTATTTGCCAACAACCTCAAAATTTTTTCTACAACTTGATTGGTAGGCAACAAATCTCCATTTCTGCCAAGTTGATTAGCCACGGTTTCAACTCGAGTTATGTACTCGGCTACACCCTTTGTCTCCTTCATCCTCAAGCTTTTAAACTCATCTTTGAGAGTTTGAAACCAGACCTAATTTACTCGGTCATCCCTTTTACATGTCTTCTCCAGTATCTCCCACACTTTTCTTAAAGATGTAACATTTGCTATCTTCTTAATGTCGGATTCATTTACTGCTCCGTACAACACGTACATAATTGTTTTGTTCTTTACTCGTGTTTGTCTCAACGTAGTAACTTGGGCAACCTATTTTTCGTTGTCTACAAACTATTAGTACCTATTTTTAACTACATCATATTCGTCTTGGGAACCAAAGAGAACCTTCATTTGCAAACTCCAATTATCATATTTGACTTTTTTTTTATCAACGGAGGCAATGACACACTGTTTGCAAGCTTGGTTGGCCATCTCTTTAACTCTCAAACACTTTTTCTCAAGCACCCAGATAGCGAAGCTCTGATGCAAATTTGTTAGCAAATTCCACTCTGTGTATAAACTGATTTAATTCAAGTGTATTATTTCATGTCAACTTAACACTACAATCTACAGGAAAAGCATTTGATTGATTTTTCATATTCAGGCATAATGTCTCCAATTATTACAAAAGACAAGCACTGTAATGACCATTAATACCAAAACATAACACATTAACTTCTTGGCTTTCGCTCTCCTAAAACATTAAAACATTTTCGCTCACAGTAACGGTTAAATAACGTTTATCCTAACCATATAAGTTTATTTTAATGTGAGAGAAATTCATTTTATTAAGTATTTATGAAAATAATGATCAAATGATTATATAGTTTTTGTATTTTCCAGATCGCTAACTACATCCCGGTGAATTTTCGTTTTGTTAGTACTATGGTTGCATGCACAACAAATTTTATAATTGGACAAATTACAATCCATAAATTAATTGAGACAAATTGTGTAGGAGTTCCGTCAAGTCTGGGATCTATAATTTTTTTCCTTGGTCCATGGTTGTTGTATAAGGTTGCATGGAAGAGAGTGATAGAGAAACGTAAACAGAAGTTCTTCAAAAAGAATGGCGGTTTGTTGTTGCAACAAAGA


Gene Sequence:
>Vu_23164(-)
ATGTCATCTAATAATGTGGACAAAGCTATTCTCTTTAGCTTAGATGATTTAGAGAAAGCCACTGACAACTTTAACGTGGATAGAGTTCTGGGAAAGGGAGGGCAAGGTACGGTTTACAAAGGAATGCTAGTAGATGGTAGAATTGTTGCAGTGAAAAAATTTAAGGTGGAAGGAAATATTGAAGAGTTCATCAATGAATTTGTCATTCTCTCACAAATCAACAACAGAAATGTGGTCAAACTGTTAGGATGTTGTTTGGAGACAGAAATTCCCCTACTTGTTTATGAATTCATTCCTAATGGTAATCTCTTTGAATATTTGCATGACCAGACAAAGGAGTTATTACCAATGACTTGGGAGATGTGTTTGAGAATTGCCACTGAGATCGCAGGAGCTCTCTTTTACCTGCACTCGGTTGCATCTAAACCCATTTATCATAGAGATATCAAATCCACAAATATACTGTTGGATGAAAAGTATAGGGCAAAAATTGCAGATTTTGGAACATCCCGGGTAATTTCTATTGAAGCTACTCATCTTACAACAGTTGTTCAAGGTACCTTCGGTTATTTGGATCCTGAATATTTTCACACTAGTCAATTTACAGAGAAAAGTGATGTCTATAGTTTTGGAGTAGTTCTTGCTGAACTTTTAACAGGCCAAAAGGCAATATCACCAGCAAGATCTGGAGAGTTCAAGAGTCTAGCATCATATTTTGTTGAGTGTCTGGAGGAGGACAATCTGTTTGACATTATTGACAAAAGAGTTATGAAAGAAGCAGAGAAGGGACAAATCATTGCCGTTACTAATCTTGCAAATAGATGCTTAGAGTTGAATGGAAAGAAACGTCCAACTATGAAAGAGATCACACTTGAATTAGAAGGGATTCATGGGTTGGTCAGGAAGTGTAATGCAGAGAAAAAAGGTGACGAAGTTGAGCTTGCACGAGTTGGCATCCTTGGGATGGATATTCTACGTCAAAGTCATGGTACTCAAAAGGTTGTACCTATGGTACAATAA