Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22848 LG5 59660901 59662095 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 59660918 synonymous_variant p.Val6Val
T/G 59660942 synonymous_variant p.Pro14Pro
T/C 59660972 synonymous_variant p.Ser24Ser
C/T 59661027 missense_variant p.Leu43Phe
C/G 59661436 intron_variant
C/T 59661453 intron_variant
T/C 59661582 synonymous_variant p.Leu179Leu
G/T 59661606 synonymous_variant p.Gly187Gly
G/A 59661639 synonymous_variant p.Ser198Ser
C/T 59661675 synonymous_variant p.Cys210Cys
C/T 59661787 stop_gained p.Arg248*
T/C 59661867 synonymous_variant p.Thr274Thr
C/T 59661930 intron_variant
A/G 59661935 intron_variant
G/A 59662029 synonymous_variant p.Lys291Lys
A/G 59662038 synonymous_variant p.Ser294Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22848.1
MALEAVVYPQPQDPFGCAIKDLYSYNNLLEAAAANLGYGDFTLEKEDQASVTFLDNQTENYSYGEWNSSPPSLLPHTINASNPPSSETSNTQNNLDTSVSTPARPKRRRTKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRALMPESYVQRGDQASIIGGAINFVKELEQRLQFLGAQKEKEGKPEVPFSEFFSFPQYSTSASGGCDNSAAMSDQKGEVQSGIADIEVTMVESHANLKIRSKKRPKQLLKIVSSLHGMRLTILHLNVTTTEEIVLYSLNVKVEEDCKLGSVDEIAAAVYEMLNRIQQE*


CDS Sequence:
>Vu_22848.1
ATGGCTCTAGAAGCAGTGGTGTATCCCCAACCCCAGGACCCTTTTGGCTGTGCAATCAAAGACCTATACAGTTACAACAACTTGTTAGAAGCTGCTGCAGCCAACTTGGGTTATGGAGATTTCACCCTTGAAAAAGAAGACCAAGCTTCTGTCACTTTTCTTGACAACCAAACAGAGAATTACTCCTATGGAGAATGGAACTCTTCTCCTCCCTCTTTGTTGCCTCACACCATCAATGCATCAAATCCTCCTTCTTCAGAAACCAGCAACACGCAGAACAACTTAGATACTTCAGTTTCCACCCCAGCTCGCCCCAAACGCCGCAGAACCAAAAGCAGGAAGAATAAGGAAGAGATTGAGAACCAGAGAATGACCCACATTGCTGTAGAACGCAACAGAAGGAAGCAGATGAACGAGTACCTCTCTGTTCTTCGCGCTCTGATGCCTGAATCTTACGTCCAAAGGGGTGATCAAGCATCTATTATTGGGGGTGCTATAAACTTTGTGAAGGAGCTTGAGCAGAGGCTGCAATTTCTTGGTGCTCAGAAAGAGAAAGAGGGGAAACCTGAGGTACCCTTTTCTGAGTTTTTCTCGTTTCCTCAGTACTCAACAAGTGCCAGTGGTGGCTGCGATAACTCTGCAGCCATGAGTGACCAAAAGGGCGAGGTTCAGTCTGGCATTGCTGACATAGAAGTGACAATGGTAGAGAGCCATGCAAATCTCAAAATAAGATCCAAGAAACGACCAAAGCAGCTCTTGAAAATAGTATCTAGTTTGCATGGCATGCGTCTCACAATCTTGCACCTAAACGTTACCACAACTGAGGAAATTGTCCTCTATTCTCTCAACGTCAAGGTTGAAGAAGATTGCAAGCTGGGATCAGTGGACGAGATAGCTGCAGCTGTATACGAAATGCTGAACAGAATCCAACAAGAGTGA


Promoter Sequence:
>Vu_22848::LG5:59658901-59660901(+)
ATATAATTTCTTTAGATTTTCTCATTGTTTTTTTGTTTCTTGAAATTTGATTTTTCCGATAAAGCAACTATCTGTGTCTGAACTGTTGGAGAGTCAATGCAGTGAATAGTAAATATGAAGCTTTCTTGTGAACATTTGACACCTGAGCTATTCTAATTCTAATTTAGTTTTTTTTTATGTAAATATACATAATTAATTACACTTTTACTAATATTTTGATATTTATTTTAAAATATCTTTATCATTAATCTCATAAGATAAAAATAAAAAAGTATTGTTCACCTAGTTATTACAGGTACAAACAAAATGGATTACATACTGCAATAATACAAATAAAAGTTAAATATTAATTAAATTTAAGATATTTTAAAAAATATCATTAAAAAATCTACAAAAGAGTTAAACTTTTACTTATTTTTTATATCTTTTTTTAGCATGGATGGAACATTGTTTTACATCTCTTTTGATTTGCGGTTATTTTTGAAAAAAAAAAGCATTTTTATTGTTATTTTATTATAAGTAATAAAATAAAGAATAAAAAAATCTAATTAATATGAACAGTTAGAGATATAAAGAAATAAAAAAAAATCATGAATCTTAATATATAAATCTACCACTAAAGTTATTGAATGCAAACATTACAATGTGACATGAAATATATTTGAAGTTTACAAATTGATGGAATATTTTGCAGGAGAGTTTACTGGTGATGATTTTTACAATAATTTTACAAAAAAAGTTAAGAAAATTATTAGAATAATGAGAGGAGATATAAATTAACCTGTCATCTGTATGGAGTTGATTCTAATATAACTTACAATCCAAATATATGCTTCTAATCTCATCCATCTTTATTTAATGTAAACACATAACTTTACACTTAAATTTCTATATAAATTAATTTATATTTTAAAAATTTATTCTTTTTAAAATTTTATCAAAAAGACTTTGGTTAGGGTGTATTTATAATATTTTATCAAAAATTTTCTTGAATTTATAACATTTTTAAGAATTCAAGGTGATTTAAAAATATCATAAGTAAAAATGAATAAAATGAACAATATACAAGATGAATGATTCATAAATGTGTTATCATTATCATAAGTTTTAGAATTGAATGTCTTATTTATATATATATATATATATATATATATATATATATATATATATATATATTTTGATATTAAATAACTAAAATATTTGTATAACTCTTAAAAAAATATTATTATAAAATTTCAAAAGTATTTTAAGATTTTAAATTAAAAATAATTTCTTTATTTCTTATATTAATAACAAATTTTCTTAATGCCTATTATCGGAAAACCTCAGATAATATAGTGTCCAGTCTGATACTATAATGTGAACACTAGAAAATGCAATATATGTATAAATATATAATGATTATTTTGTGTATAGTCTTCACTTAGAAGAGGAAGTTTCTGAAATAATATGAAAGTTTTTGTACTCTCTGAAGTCTAAACTCTAATCCTTATTGTTCCATGCTGTCCAAAAAAATTCTTTATTGTTCCTATTCTTGTTCAAAGTTGTGTTGGCTTTTATATATATGATACACAAAGGTATTTATTGTTTGTACTTCAACCCCAAAGAATACACATTATTTAATACATCATTTTAAATTTATCTCTGTCATTGTCTATGAAATATATTAAAAAGTTAACTTTTTTTAATATTTTAAGTGTATAGTTTATAATTAATTGTAAGCAATACTGTATAGTAAAATATGCATCAGAAAAGAGGAGTGTCTGGTCCTATTTTGTTCTTGTTTTTGGCTACTGTAAAGTCCTAACACATAGGTGTTCTCTCAATTTCACGTGCAAAGCACTGTCCATTTTGTGTCTTCAAGCCTTTAAAAGCTCAAAAACACTTCTCAATAGCATGCAACTTGCTATTTTCCATCTCCATCTTCTTCATCTTGTTCTTGTTTCAGAGCACCCACATAAAAAAATTTTGCATGTGTTTATCTGAGGGAGAGAGAGGCA


Gene Sequence:
>Vu_22848(+)
ATGGCTCTAGAAGCAGTGGTGTATCCCCAACCCCAGGACCCTTTTGGCTGTGCAATCAAAGACCTATACAGTTACAACAACTTGTTAGAAGCTGCTGCAGCCAACTTGGGTTATGGAGATTTCACCCTTGAAAAAGAAGACCAAGCTTCTGTCACTTTTCTTGACAACCAAACAGAGAATTACTCCTATGGAGAATGGAACTCTTCTCCTCCCTCTTTGTTGCCTCACACCATCAATGCATCAAATCCTCCTTCTTCAGAAACCAGCAACACGCAGAACAACTTAGATACTTCAGTTTCCACCCCAGCTCGCCCCAAACGCCGCAGAACCAAAAGCAGGAAGAATAAGGAAGAGATTGAGAACCAGAGAATGACCCACATTGCTGTAGAACGCAACAGAAGGAAGCAGATGAACGAGTACCTCTCTGTTCTTCGCGCTCTGATGCCTGAATCTTACGTCCAAAGGGTACTAAAAAATGCTTCTGCTTTTCACTTTCTTCAAAGGGAAATCTTCAATTTAATGTCTTTAAGTTTGCCTTGTTTTTTAAGCTGCCAAACATCATGGTTAAAGTGTTTCTGTTTTGATTCGATTCGATTCATTGGAAATGCAGGGTGATCAAGCATCTATTATTGGGGGTGCTATAAACTTTGTGAAGGAGCTTGAGCAGAGGCTGCAATTTCTTGGTGCTCAGAAAGAGAAAGAGGGGAAACCTGAGGTACCCTTTTCTGAGTTTTTCTCGTTTCCTCAGTACTCAACAAGTGCCAGTGGTGGCTGCGATAACTCTGCAGCCATGAGTGACCAAAAGGGCGAGGTTCAGTCTGGCATTGCTGACATAGAAGTGACAATGGTAGAGAGCCATGCAAATCTCAAAATAAGATCCAAGAAACGACCAAAGCAGCTCTTGAAAATAGTATCTAGTTTGCATGGCATGCGTCTCACAATCTTGCACCTAAACGTTACCACAACTGAGGAAATTGTCCTCTATTCTCTCAACGTCAAGGTTTGTGCTACCTAATTTCACTTTCAAAGCGAAAACAATGTTGTAAAAAACATTATGATACGTGGTACATATGTCTCTGTGAGTGCTGATGTTTTGAAAATGTTGTTGAAGGTTGAAGAAGATTGCAAGCTGGGATCAGTGGACGAGATAGCTGCAGCTGTATACGAAATGCTGAACAGAATCCAACAAGAGTGA