Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22638 LG5 57465636 57468990 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 57465641 synonymous_variant p.Thr2Thr
T/A 57465734 stop_gained p.Tyr33*
T/A 57465741 missense_variant p.Trp36Arg
G/C 57465742 missense_variant p.Trp36Ser
C/T 57465797 synonymous_variant p.Arg54Arg
G/A 57465838 missense_variant p.Arg68Gln
T/C 57465850 missense_variant p.Val72Ala
C/T 57465981 synonymous_variant p.Ser91Ser
A/C 57466048 missense_variant p.Ile114Leu
A/G 57466065 synonymous_variant p.Pro119Pro
A/G 57466075 missense_variant p.Met123Val
G/A 57466138 splice_donor_variant&intron_variant
A/G 57466141 splice_region_variant&intron_variant
C/T 57466160 downstream_gene_variant
A/C 57466176 downstream_gene_variant
G/C 57466180 downstream_gene_variant
G/C 57466249 downstream_gene_variant
G/A 57466253 downstream_gene_variant
G/A 57466255 downstream_gene_variant
A/T 57466280 downstream_gene_variant
A/T 57466291 downstream_gene_variant
A/T 57466296 downstream_gene_variant
C/G 57466310 downstream_gene_variant
G/A 57466315 downstream_gene_variant
A/G 57466316 downstream_gene_variant
C/T 57466384 downstream_gene_variant
C/T 57466397 downstream_gene_variant
G/A 57466412 downstream_gene_variant
C/T 57466416 downstream_gene_variant
T/C 57466426 downstream_gene_variant
A/G 57466445 downstream_gene_variant
C/T 57466449 downstream_gene_variant
A/T 57466456 downstream_gene_variant
A/T 57466461 downstream_gene_variant
C/T 57466465 downstream_gene_variant
G/A 57466505 downstream_gene_variant
G/A 57466508 downstream_gene_variant
G/A 57466510 downstream_gene_variant
G/A 57466518 downstream_gene_variant
T/G,A 57466650 downstream_gene_variant
G/A 57466651 downstream_gene_variant
C/T 57466675 downstream_gene_variant
G/A 57466683 downstream_gene_variant
T/C 57466834 downstream_gene_variant
A/G 57466896 downstream_gene_variant
A/G 57466904 downstream_gene_variant
A/T 57466969 downstream_gene_variant
G/A 57467041 downstream_gene_variant
T/C 57467066 downstream_gene_variant
C/T 57467069 downstream_gene_variant
A/G 57467070 downstream_gene_variant
G/A 57467073 downstream_gene_variant
A/G 57467155 downstream_gene_variant
A/G 57467167 downstream_gene_variant
C/T 57467192 downstream_gene_variant
G/T 57467204 downstream_gene_variant
G/A 57467258 downstream_gene_variant
A/C 57467271 downstream_gene_variant
A/G,* 57467314 downstream_gene_variant
G/T 57467367 downstream_gene_variant
G/A 57467416 downstream_gene_variant
A/T 57467516 downstream_gene_variant
T/C 57467552 downstream_gene_variant
T/G 57467626 intron_variant
C/T 57467710 intron_variant
G/A 57467759 intron_variant
C/T 57467785 intron_variant
A/T 57467842 intron_variant
C/T 57467848 intron_variant
G/A 57467864 intron_variant
G/A 57467934 intron_variant
C/A 57467946 intron_variant
G/A 57467948 intron_variant
T/C 57467987 intron_variant
C/T 57468012 intron_variant
C/T 57468021 intron_variant
A/T 57468026 intron_variant
G/A 57468099 intron_variant
A/G,* 57468103 intron_variant
G/C 57468132 intron_variant
T/C 57468141 intron_variant
T/C 57468142 intron_variant
C/T 57468150 intron_variant
G/T 57468211 intron_variant
A/C,T 57468213 intron_variant
A/G 57468228 intron_variant
A/T 57468240 intron_variant
A/G,* 57468263 intron_variant
G/A 57468296 intron_variant
G/A 57468306 intron_variant
C/T 57468308 intron_variant
G/T 57468309 intron_variant
C/G 57468327 intron_variant
C/G 57468336 intron_variant
C/T 57468346 intron_variant
T/G 57468353 splice_region_variant&intron_variant
T/G 57468362 missense_variant&splice_region_variant p.Val144Gly
C/T 57468368 missense_variant p.Ala146Val
G/A 57468370 missense_variant p.Ala147Thr
A/G 57468373 missense_variant p.Thr148Ala
C/G 57468374 missense_variant p.Thr148Ser
G/A 57468376 missense_variant p.Ala149Thr
C/T 57468377 missense_variant p.Ala149Val
G/A 57468378 synonymous_variant p.Ala149Ala
C/T 57468389 missense_variant p.Pro153Leu
G/A 57468390 synonymous_variant p.Pro153Pro
T/C 57468402 synonymous_variant p.Gly157Gly
C/A 57468405 synonymous_variant p.Pro158Pro
G/A 57468430 missense_variant p.Val167Ile
T/C 57468432 synonymous_variant p.Val167Val
G/T 57468443 missense_variant p.Trp171Leu
A/G 57468456 synonymous_variant p.Leu175Leu
C/T 57468458 missense_variant p.Ala176Val
G/A,C 57468477 synonymous_variant p.Ser182Ser
G/A,* 57468482 stop_gained p.Trp184*
G/A 57468490 missense_variant p.Ala187Thr
C/T 57468491 missense_variant p.Ala187Val
G/T 57468500 missense_variant p.Trp190Leu
G/A 57468538 missense_variant p.Val203Met
G/A 57468563 missense_variant p.Gly211Glu
C/T 57468569 missense_variant p.Thr213Ile
G/A 57468581 splice_region_variant&intron_variant
A/C 57468588 intron_variant
C/A 57468590 intron_variant
G/A 57468596 intron_variant
G/A 57468600 intron_variant
C/T 57468619 intron_variant
G/A 57468620 intron_variant
G/A 57468634 intron_variant
T/C,* 57468649 intron_variant
C/T 57468658 intron_variant
C/T 57468667 intron_variant
A/G 57468701 intron_variant
T/G 57468709 intron_variant
C/T 57468714 intron_variant
A/G 57468716 intron_variant
C/G,T 57468765 synonymous_variant p.Ala218Ala
A/G 57468781 missense_variant p.Met224Val
C/T 57468816 synonymous_variant p.Thr235Thr
G/A 57468901 intron_variant
G/C,T 57468911 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22638.1
MTGPFPLAIAAMLLLCHFHLGSNFFSGQIPPKYGTWQHLTNSWETSPGAWKPHRASRALHWLLQRLLRRHPVGDWKLVPACPFRRRVNALSDSLTPKLGNLESLKLMDLPNKVISGEVPTSFMELKNLTLLRAAAPPSLFVMCVGAATATLSPRRDGPCSWRWQQGVDSIWGLALAIRFRVSIWGLATLWEARLRLRWWRLAVDLAFVGDGPTRARFCLQYGMHAGVMRRGERRHHGGSHGSFGDPAGSTEGEEEIVCQVIAARKLD*


CDS Sequence:
>Vu_22638.1
ATGACCGGTCCCTTCCCCCTCGCCATCGCCGCCATGCTCCTCCTCTGTCATTTTCACCTCGGTAGCAACTTTTTCTCCGGCCAGATCCCTCCCAAGTATGGCACCTGGCAACACCTAACGAACTCATGGGAAACATCTCCCGGAGCTTGGAAACCTCACCGCGCTTCGCGAGCTCTACATTGGCTACTACAACGCTTACTCCGACGGCATCCCGTTGGAGATTGGAAACTTGTCCCAGCTTGTCCGTTTCGACGCCGCGTGAATGCGCTCTCCGACTCGCTCACTCCTAAGTTGGGGAACCTGGAGAGTCTCAAGTTGATGGATCTGCCCAACAAAGTTATCTCCGGCGAGGTTCCAACGAGCTTTATGGAGCTCAAGAATCTAACTCTGCTTAGAGCTGCAGCTCCTCCTTCTTTGTTTGTGATGTGCGTAGGGGCGGCCACCGCGACTTTGTCTCCGCGGCGTGACGGTCCCTGTTCGTGGAGGTGGCAGCAGGGCGTTGATTCGATTTGGGGCTTGGCGTTAGCGATTCGATTTAGGGTTTCGATTTGGGGCTTGGCGACACTGTGGGAGGCGCGACTCAGGCTTCGTTGGTGGCGGCTGGCGGTGGATCTCGCCTTCGTAGGGGATGGACCGACAAGGGCGAGATTTTGCCTGCAATATGGAATGCATGCTGGAGTGATGAGAAGGGGCGAGAGAAGGCACCACGGAGGAAGCCATGGAAGCTTTGGAGATCCTGCAGGAAGCACTGAAGGAGAAGAGGAAATTGTTTGCCAAGTTATTGCTGCCAGGAAATTGGACTGA


Promoter Sequence:
>Vu_22638::LG5:57463636-57465636(+)
TTATTATGTATCAACAACTTTTGAGTTTATAATATAAATGAATTAGTATGGTCTTTTGTAGAATTACTGACCACAATTTGAATTTTAGTAGAAAGATTTTTTTTTCAATAATTATACAATTGATATAATATGTTTATTAATTGTTACTCATAATCCATTTTAATAAAAAAATCTATTTAATCACTTTTACTAACATATTTCCTTTTAATTATTTTCTACATCTACAGTATTTAAATTTTCAAAATCTTTTTTTGACAAATCAGTACCAAATTTATAAGAAATTTGAACTAACTTTTACTAATATTTTTATTTTAAAAAATTTATATTTTTTGTATTGTCCTTTTTAATTATAAATTTTATAATGTGTTTCTTGTTTTCAATGTATGAAAGGGATTGACAATAACTTTGTTGTTTATGTTCTATGTTTCTTAGAAATATATGAAACAGTTTAAATAAAAGATGACAATTCTATAATAAAAAAACAATAAATACTTTATTGGCATTATGTTTACGGTAAGGAATTGTTTGGAAATTTTGAAAATTGTTTTCTTTAGTATAGTTGAAACAGTACTACTGAAATAAAATTTATATAACTAGAATATATAGTGAAAATTTTATTTTAATTATAATGAAACTTTACAATTAATTTTTTAAACATACAGATTATATACTTAATAATAAATAGGTCATATTTTTTTTATTCTAACTAACATAATTTGCAATAGTATGAGATTAACTGGTCTAAAGATTTTTTTTATAGATAAAATGAATATAATCTTTTTTTTTTCTTAAGTAAACTGTTTCTATTATTGTTTTTTATTGTCAATAAAATATATATAATAATGTTTATAAAATAGTTTGTACAAATTTGTTCATAGTTTGTGCAGTTCTGTTTCATTATTTTGTATACATATATAATTATTCTAAAGTTTATAAAATATTTAAAAAGTTAGTCTTCATGATGTAGAAAATGTGTATGAAAAAGATGAGTAACTTAGAAGAAAACAGTGATGGTTGACAGGCACCGTCAATCTGCCTTGTGTGGTGGACTGATGAGAAGATGCGCCGTCCCATTAATTTGGATTGCATTATTGAAATTTAAAAAATTACTCTTAGCTATGAATAGTGATGATTTAAGTTTTAGTTTAAAGAAAGAGAATATAATCTATAGTTGTTGAATCATAATAATCTCAAATATGTGAAGTTATATTTTATCATATTAATAAAGAATTTAGTTAGAATAATACTGAAAGAGTTACTTTTTCTTTTATAATAATTTAAAATAAATTGTAAAATATAAAAATAATAATTTCAATTTTTACAATGGTTATTTTAAAATAGTTCATGATATGAAAAGGTTCTACACTAATCATATATAAAGTAAAATATAAATTTTAAAGGTAAAAACAAGAAGTGGAAATATATAGAACTTAAGACTAGATTGAATGCACTTACTTTCTCCTCAAGAACAAGTGAACTGTTCGAAATAAAACCAAACTATGCAGTAATGTATAACACTGTGTTTTCTCCTTTTTCATTTTCTAGTTTTTCCATTCACTAGTGCAATCGGAGGAAACGGCAGAGGTTATTTTCGTTAATAGGCACCAGTTTTTAAACCGAGGCATATTCAGGCGAGGTAAAAAGTGATAGACTTTATGCATCGGTTCAGAACCGAGTCATAAAAATAGTAAGATTATGCCTCGGTTTAAAATTAACTAAAGTAGTAACATTTTTTATTTTTTTAAATATTTTTTTTCGTTGGCCTTTATGTCTCGGTTCATCAGGAATCGAGGTCGTTTCTCACCCTCTCCTGAACCCCCATTTCCTCTCCTACCTTTCCCTCGTCGAGAACCAATTTTTCGGCCCAATCCCCGCCTCCTTCTCTGCACTCTCCGCCCTCCGCCATCTCAACCTCTCCAACAACGCCTTCAACACCACTGTCCCCTCCAACCTCGCCCGCCTTGCCAATCTCCAAGTTCTTGATCTCTACAACAAAAACA


Gene Sequence:
>Vu_22638(+)
ATGACCGGTCCCTTCCCCCTCGCCATCGCCGCCATGCTCCTCCTCTGTCATTTTCACCTCGGTAGCAACTTTTTCTCCGGCCAGATCCCTCCCAAGTATGGCACCTGGCAACACCTAACGAACTCATGGGAAACATCTCCCGGAGCTTGGAAACCTCACCGCGCTTCGCGAGCTCTACATTGGCTACTACAACGCTTACTCCGACGGCATCCCGTTGGAGATTGGAAACTTGTCCCAGCTTGTCCGTTTCGACGCCGCGTATTGCAGACTCTCCGGCGATATTCCGGCTGACCTCGGAAGGCTTCAGAATATGGACATGCTCTTTCTTCAGGTGAATGCGCTCTCCGACTCGCTCACTCCTAAGTTGGGGAACCTGGAGAGTCTCAAGTTGATGGATCTGCCCAACAAAGTTATCTCCGGCGAGGTTCCAACGAGCTTTATGGAGCTCAAGAATCTAACTCTGCTTAGAGCTGCAGCTCCTCCTTCTTTGTTTGTGATGTGCGTAATCACTTTCACGGGTCATCCATTATGCAACATAACAACTGTTCATGAAACTGAAATATATTTGTAAATGAGTGAAGCACGTGTTGGTGGAGGTGCAATTAATAAAAGAGGAAGAGGAAGTAGCTTTATTATTTTTTAGGATTAGGAGTGGATGAAAGAAAAGTTGCAGGCGGTGGAATATGGGATGGGATGGGATGTGACATTGTCAGGGATGAAGGAAAAGTTGCTTGCACGCGGATTCATGCCATTAATATATTCCCATCTTAGGCCTCGGTTCTGTACTGACTGAGGCATAAACCTCTTTCAACACCGGTTCAGTACAGAACCGAAGCACTAGATCACGTGTCAGGCCAAAACTCAATTTTGCAGAGGCGCGGGGTAACTTTTTCAGAAAGTATTAGGCACCGGTTATGATTTGAACCGAGGTAAAATGCTCTATATGCTTCGAATATTCTTAAACCGGTGCATATAAGTTGGTGAAAACTACAAGATTGCCACCGCTTTCGAATATGCTTCGGTTTTTCTTTGACCGAAGCCTATTAGGCGAGTTCAAAAGCATATTTTTTACTAGTGTTTGGCTGTCTTTATTTGAAATTTCTTTTTACCAGGATAGAAAATGATTATGACTATTTAATCTAATGTTGAAATTATCATAACTTTTATATGATAGATTTAATGTTTAAAATAGTATGATTATATTTTACTTATATATATATATATTTATATATTTATATTTTCTTAATAATAATATAGGTTATAAATATATTATATGAAGTGTAATTTTTATTATGAATTTGATATTTTTTTATATATTTTATATTCATTTATTATTTTTCTACTTTAATAAATTTGTATGAATTATAAGAATTTTTATAATTATTGAATATTTTTATTGACGAAAGTAAATTTATTAATAAATTTAAATTTATCAATGAATTTTATTTATATATTTTAAGATTTAAGTTATAATCTAATGGTTTATTTCATCGATAAATTATAATTCAGATTTTTGAAGAATTTATCCGTCATTAAATTGATCAAATTAGATTGATCAAGTTAGAAAAGGTGTAGGACTAAGAAGGGATTAGAAAAGGTGTAGGAGTAAGAGGAAAATGAGAGAAAAAAAAGAAGAGAAGGAGGTAGAAGAAGAGAAGGAGAAGATTGAGTGGAAGGTAAGGATGCTTGACGAAACTGTTGAAACATAATGAAGAGGAGAGGGGATGAGGAGGAGGAAAAAGAAGAAAAGGAGATGAAAGAAGAAAAAGAGATGAAAGAAGAAGACTCAATCACAATTTTTATCAACAGATTTTACTAACAACCAAAATCTGTCAATAATTACTGATAGATATTGTCGATGAATATTTTTACCAACAAATATATAATGTTGCTAAATTACTAATGAATTGTGAAATTTATAGGAAAATTTTTTGCCAATCACTTCGTCCATAATTTTTTTTTCCATTGCTGAAATCAAATTATCAATTATTTTTTCTATTACCGACAATTTATGTTTGTCAATAATATATATGTCATTTTCTTATAACGACGTGGTGTAAAAATGATTTATAAACTTTGATGTATCCAGATAAATAAAATATCAAAGTTCATAATAATACCTAGCATTAACTTATTTGAAAATATCTCGCTATCTTTATTAAGCTTAATTTTAATATATATCATTCACTAGTGCAAAATAGGGATAAGAACACGGGTCATACGTCTCGGTTTTTAGAAAACCGAAGCATATGTAAAGGCAGTGGCATTTTCGTAATTTCGACGAACTTATACGTCTCGGTTGTAAAAATACCGAAGCATAAAAACCAAATTAACTCGGTTAAAAACAAAATTGAGACCTAATGTTCTGCCACGTCCCACCTAAAACTGGTAAATTTTTTGAAATTGCCCTACTACCTCGGTCCTCTAACCCAACCGAGGCATAAACGTTCCGAAATCCAAAAGGGGTAATTTACCCTAATTTCATTTTGAAGACTTGGGTATCCTTTACTACTCCCGTCACTTGCAACATCCAGAGCACGCAGTGAATAAGGAATTCCAAATTCACTTTCCCCTTGCATATCCATCCATGCGAAATCCAGAAGCAGCTTAACGTTGGCGGCGAGTGCAGCGAGGCATGGTGAGGTCGCGGCGAGGTCGCAGCAAGGTGGCGGCGAGATCTCTTCTTCCCTTCTTTCTTTTCAGGTTCAGACGCGATTTCGCGTAGGTAGGGGCGGCCACCGCGACTTTGTCTCCGCGGCGTGACGGTCCCTGTTCGTGGAGGTGGCAGCAGGGCGTTGATTCGATTTGGGGCTTGGCGTTAGCGATTCGATTTAGGGTTTCGATTTGGGGCTTGGCGACACTGTGGGAGGCGCGACTCAGGCTTCGTTGGTGGCGGCTGGCGGTGGATCTCGCCTTCGTAGGGGATGGACCGACAAGGGCGAGGTGATGGAAAACCAAAGGCGCGACGATGGACCGACAAGGGCGAGCTGATGGTGCGGCGGCGGTGGCGCGATGAGGGTTTCGTTGGCAGCAAGGGTTTCGTTTTTGGCAGCGAGGGCTTCTGCATTTTTGGTTTCTCTACCTTCAGTTTCAAAACTCATCATTCAATTTTATTTTTGTAGATTTTGCCTGCAATATGGAATGCATGCTGGAGTGATGAGAAGGGGCGAGAGAAGGCACCACGGAGGAAGCCATGGAAGCTTTGGAGATCCTGCAGGAAGCACTGAAGGAGAAGAGGTTCTTTGAAGGAGAGAGCATAGGATTGGTAGATATTGGTGCCAATTTCATTGGATATTGGGTTGAAATATTGCAGGAAATTGTTTGCCAAGTTATTGCTGCCAGGAAATTGGACTGA