Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22390 LG5 54117333 54119294 PREDICTED: probable L-type lectin-domain containing receptor kinase S.7
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C,* 54117359 missense_variant p.Met9Ile
C/*,T 54117373 missense_variant p.Thr14Ile
C/T,* 54117376 missense_variant p.Thr15Ile
A/T 54117378 missense_variant p.Thr16Ser
C/T 54117379 missense_variant p.Thr16Ile
T/G 54117400 missense_variant p.Phe23Cys
C/A 54117404 missense_variant p.Phe24Leu
A/T 54117448 missense_variant p.Asn39Ile
A/C 54117455 synonymous_variant p.Ser41Ser
C/T 54117467 synonymous_variant p.Pro45Pro
C/A 54117469 missense_variant p.Ser46Tyr
T/C 54117506 synonymous_variant p.Ser58Ser
T/A 54117574 missense_variant p.Leu81His
T/C 54117581 synonymous_variant p.Phe83Phe
C/T 54117587 synonymous_variant p.His85His
C/G 54117623 synonymous_variant p.Thr97Thr
C/A 54117666 missense_variant p.Pro112Thr
G/T 54117770 synonymous_variant p.Ser146Ser
G/A 54117853 missense_variant p.Arg174Lys
C/T 54117979 missense_variant p.Thr216Ile
A/G 54118008 missense_variant p.Met226Val
G/A 54118029 missense_variant p.Glu233Lys
G/A 54118073 synonymous_variant p.Ser247Ser
T/A 54118332 missense_variant p.Ser334Thr
G/A 54118336 missense_variant p.Arg335Lys
G/A 54118394 synonymous_variant p.Gly354Gly
G/T 54118661 downstream_gene_variant
A/G 54118946 downstream_gene_variant
T/A 54118966 downstream_gene_variant
T/G 54119073 downstream_gene_variant
T/A 54119074 downstream_gene_variant
A/T 54119192 downstream_gene_variant
T/C 54119243 missense_variant p.Leu447Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22390.1
MFLRTTTTMFLRTTTTIFIITIFFFTTTATSTLSQNNTNFSFSFPSFTLRNITLLGDSFLRNGLVGLTLSTTVPASSSGTLFFNHPITTTPSFSLSTNFTFSITNTTTSATPSSTFSFFLNSSHTLLSLNFHPNQNHLTLDLSVSSITNSTSVDLSTDTPITSWVDYHHADKKRLQVFLNYSSPATSKPQNPVLSVDLDLYEYFKDSLYLGFSGSTQGSTELIQVMSWSLEFESNSHLLINGSSSPSNVAVEGIPVSSNSTQGSKNRGKRFLFGLCVAIVGPAFFCLVLVVLGYVSFLKWRGLRKKKGFGTVGCCPKEFGYKEVKLATKGFHASRVIGNGSFGTVYKALFESSGTIAAIKRSRQYDGKTEFLAELSIIASLRHKNLVQLLGWCVEKGELLLVYEYMPNGSLDKVLYQECEGGSPNRVLSWVHRVNIAVGLEDIVSDAEEELNSGQVVCEIKID*


CDS Sequence:
>Vu_22390.1
ATGTTCTTAAGAACAACCACCACCATGTTCTTAAGAACAACCACCACCATCTTCATCATCACTATCTTCTTCTTTACAACAACAGCAACATCAACCCTTTCTCAGAACAACACAAACTTCTCATTCTCCTTTCCCTCCTTCACCCTCCGCAACATAACCCTCCTCGGTGATTCTTTCCTTCGCAACGGCCTCGTCGGCCTCACCCTCTCCACCACTGTCCCCGCCTCTTCCTCCGGCACCCTCTTCTTTAACCACCCCATCACCACCACCCCTTCTTTCTCTCTCTCCACCAACTTCACCTTCTCCATCACCAACACCACCACCTCCGCCACCCCCTCCTCCACCTTCTCCTTCTTCCTCAACTCCTCCCACACCCTCCTCTCCCTCAATTTCCACCCCAACCAAAACCATCTCACCCTCGACCTCAGCGTCTCCTCGATTACCAACTCCACTTCGGTTGATCTCAGCACCGACACTCCGATCACTTCTTGGGTTGATTATCACCACGCCGACAAGAAAAGGCTTCAAGTTTTCTTGAACTACTCGTCACCAGCCACTTCCAAGCCTCAAAACCCTGTCTTGAGCGTTGACCTTGACCTTTATGAGTACTTTAAGGACAGTCTCTACTTGGGGTTTTCTGGTTCCACCCAAGGAAGCACCGAGCTTATCCAAGTCATGAGTTGGAGTTTGGAGTTTGAGTCAAACTCGCACCTTCTGATCAATGGTTCTAGCAGCCCTTCGAATGTTGCTGTCGAGGGCATTCCTGTTTCTTCTAATTCCACTCAGGGTAGTAAGAATCGTGGTAAGAGATTTTTGTTCGGTCTTTGTGTTGCCATTGTTGGTCCTGCTTTTTTCTGCCTGGTGCTTGTGGTTTTGGGGTATGTTTCTTTTCTGAAGTGGCGTGGTTTGAGGAAGAAGAAAGGTTTTGGAACAGTGGGATGTTGTCCCAAAGAGTTTGGTTACAAGGAGGTGAAGTTGGCCACTAAGGGGTTTCATGCCTCAAGGGTAATTGGGAATGGGTCTTTTGGGACAGTGTACAAGGCTTTGTTTGAGTCTTCTGGGACAATAGCTGCAATCAAAAGGTCAAGACAGTACGATGGAAAAACTGAGTTTTTGGCAGAATTATCAATTATAGCTAGTTTGAGGCACAAGAATTTGGTTCAACTCCTAGGTTGGTGTGTTGAGAAGGGTGAGTTGTTGCTTGTGTATGAGTATATGCCAAATGGAAGCTTGGACAAGGTGCTTTACCAAGAATGTGAAGGTGGGAGTCCTAACCGTGTGTTGAGTTGGGTTCATAGGGTTAACATTGCTGTTGGTCTTGAAGACATTGTTTCTGATGCTGAGGAAGAGTTGAACTCTGGCCAGGTTGTGTGTGAGATTAAAATTGATTGA


Promoter Sequence:
>Vu_22390::LG5:54115333-54117333(+)
TTAAATTACTATTTTAAAATTCTAATTCTACACATATTTATTAACTAGTTGTTTAGTAAATTATATTAATTTCCTTAATTTATATTCCAAAATTGTAATATTTGGTTTGCACCTCCGAAATGCAATGATGAATCTGATTGAAGTTTTGAACGATGTAATTATCTTTTTTTATCGGTTCAGGTTTAACAATGCCTATGCAGCAAGAAAACAACTATGCGAACACAGAAACTGCAGCAGATGGAGTTGAAATCCCTAATTTGATTGGGAGAGATAAGAGCAAGATGCCAATTACAAATGTGACAAAAATCATGAGAAAATTCCTTCCAAACACTGCAAAAGTCTCTGATGGAGCCAAAGAGATGATTCAACTAAGTGCTACAAACTACATAACCCATGTAACAAGAAAAGCCAAAGAGAAGTGCCAGAGTGAGTACAGAAAGATTATGAATGCAGATGACTTGTTATGGGCCATTGAAAATGTGGGCTTTGATGAATACATTGGGCCTCTCAGTACTTTTCTCCAACGTTGTCGTCACTTTGAAGGAGCTAGTGCTAATGGGCCTGCTTTTGGGCCTACTTTTGGGCCTGACCTTAACCCTCTGGAAATGCCCCACCCTCCTCTACCACCTCCGCCACCACCGCCACCACCACCGGTGGTTTGTTCATCTGGGTTAGACTTTTCCATGCAGCAAAACACAATATTTGACCCAAATGATGTGAGCGGATACCTGGATGGTGTTGGTTGCTCAAACAATGCTTTTATCAACTTTGATCCTTTTTCCCTCTTCCAACAGGATCAGCTCTGAGATGAAAATGATCACAAAGAATAAGTCGTTTGTTTAAAATCAAAGGCAATATGGTTGAATTGTCATTCTCATTGTTCAATTAGGGATAGAACTATGAATGTTTATTATGAGAAAACTAAAGTTTCAAGCTTTATTTCTTGAATCTCCAGTTCGAGGTGACATATACATTATAGGTCCATTTTGGATGAAATGATTTTAGATTGAGTACATACATTTGAGCTGCATTTAGTTTTGTTTACTTTAATGATGATGAATCTCAAATTTATAACGGCTATGTATGAAGTAGCTTGCATCAATATCCTTTGTTTAGAATTGTACTTTGATGACTTGGTGGGTCAGAAAACAGAGTGACTCACATGGGCATCAAATTTCAATGATTTCACCTAGGAAAGTGTTGGATTTTGCTCCTGTCACTTCACACATTTATAAGATTTTCAATCCCTCCTTTGACCACCACCTGTTTGTTGAAAAATAAAGCTTTCAAGAAATGTAAACCCTAAAGTCTCATTTCTTTATCAATCTCTTTCATACCATGCTTAAATATTTCACTCATGAAAAGTTATATTACAAAAAATAACATTTAATCTTTCAGATTATACCCCATTATTAAACAAGTTTCTGAAGTTAAGAAAAATTAAATAAATTTACGAAACCTTTAAGATTTCATTTAACTATACCATCAAAATTAATAATAGCATCTGCAGTTATTTGATTATTATAATAATATACATTTAAGATCCTACATTTTAAGAAAAAATTCAAAGGCTTATTTAATGTTTTCATTTCAAAAACTTATTTATCAATAATGAGCAATTTTAAAAATTAAATGAACCATTAATGAATAAATTTTCCTAACTAACACCTCGTCTCTATGCCTTTTTTTGTTCAAACCTTCTAATTCATTTACTTGAAAAATGTTTGAGTAATCCCAAATTTCTCATAATCCACAATCTCTATTAGTCTTTTGTGACATATATTCAAATTTGCTAATTTAAAGTAAATTAATATTAAATAATCCAAAAACATCATGTTCCTACGTAACTTTTAGTTGTTGTTTTCCACTTTCCCACTTAGCAAATTTGCACAACCGTTATGTTCCCACATTCCCACCCATTCCTTATTTAAATCCCATCATCACTTTCTCACTTTCTTTATTTTCACACATTCATCTTCAATCTTACAACACCACCACCA


Gene Sequence:
>Vu_22390(+)
ATGTTCTTAAGAACAACCACCACCATGTTCTTAAGAACAACCACCACCATCTTCATCATCACTATCTTCTTCTTTACAACAACAGCAACATCAACCCTTTCTCAGAACAACACAAACTTCTCATTCTCCTTTCCCTCCTTCACCCTCCGCAACATAACCCTCCTCGGTGATTCTTTCCTTCGCAACGGCCTCGTCGGCCTCACCCTCTCCACCACTGTCCCCGCCTCTTCCTCCGGCACCCTCTTCTTTAACCACCCCATCACCACCACCCCTTCTTTCTCTCTCTCCACCAACTTCACCTTCTCCATCACCAACACCACCACCTCCGCCACCCCCTCCTCCACCTTCTCCTTCTTCCTCAACTCCTCCCACACCCTCCTCTCCCTCAATTTCCACCCCAACCAAAACCATCTCACCCTCGACCTCAGCGTCTCCTCGATTACCAACTCCACTTCGGTTGATCTCAGCACCGACACTCCGATCACTTCTTGGGTTGATTATCACCACGCCGACAAGAAAAGGCTTCAAGTTTTCTTGAACTACTCGTCACCAGCCACTTCCAAGCCTCAAAACCCTGTCTTGAGCGTTGACCTTGACCTTTATGAGTACTTTAAGGACAGTCTCTACTTGGGGTTTTCTGGTTCCACCCAAGGAAGCACCGAGCTTATCCAAGTCATGAGTTGGAGTTTGGAGTTTGAGTCAAACTCGCACCTTCTGATCAATGGTTCTAGCAGCCCTTCGAATGTTGCTGTCGAGGGCATTCCTGTTTCTTCTAATTCCACTCAGGGTAGTAAGAATCGTGGTAAGAGATTTTTGTTCGGTCTTTGTGTTGCCATTGTTGGTCCTGCTTTTTTCTGCCTGGTGCTTGTGGTTTTGGGGTATGTTTCTTTTCTGAAGTGGCGTGGTTTGAGGAAGAAGAAAGGTTTTGGAACAGTGGGATGTTGTCCCAAAGAGTTTGGTTACAAGGAGGTGAAGTTGGCCACTAAGGGGTTTCATGCCTCAAGGGTAATTGGGAATGGGTCTTTTGGGACAGTGTACAAGGCTTTGTTTGAGTCTTCTGGGACAATAGCTGCAATCAAAAGGTCAAGACAGTACGATGGAAAAACTGAGTTTTTGGCAGAATTATCAATTATAGCTAGTTTGAGGCACAAGAATTTGGTTCAACTCCTAGGTTGGTGTGTTGAGAAGGGTGAGTTGTTGCTTGTGTATGAGTATATGCCAAATGGAAGCTTGGACAAGGTGCTTTACCAAGAATGTGAAGGTGGGAGTCCTAACCGTGTGTTGAGTTGGGTTCATAGGGTTAACATTGCTGTTGGGTTGGCTTCAGTGTTGAGTTATCTGCATCAGGAGTGTGAGCAGAGGGTGATTCACAGGGACATCAAAACAGGGAACATATTGCTAGATGGAAGCATGAATCCAAGATTGGGTGATTTTGGGTTGGCCAAGCTTATGGACCATGACAAGAGTCCTGTTTCAACACTAACTGCTGGGACAATGGGGTATCTTGCTCCTGAGTATCTTCAATGTGGAATGGCAACTGAGAAGACTGATGTGTTTAGCTATGGAGTGGTGGTGCTTGAGGTGGCTTGTGGGAGGAGGCCAATTGAGAGGGAAGGACAAAAGATGGTGAATTTGGTGGATTGGGTTTGGGGGTTGCATTCTCAAGGGAGGATCATTGAAGCTGCTGACAGAAGGCTAAATGGGGAGTTTAAGGAAGGAGAAATGAAGAAGCTTTTGCTCTTGGGATTGAGTTGTGCTAACCCTGATAGTGCTCAGAGGCCATCCATGAGAAGAGTGTTGCAGATTCTCAACAATGAAGGAGGGGTGTCTCTTGTGGTACCTAAAGAAAAACCAACACTAACTTTTTCTTCTGGCTTGCCTTTGAGTCTTGAAGACATTGTTTCTGATGCTGAGGAAGAGTTGAACTCTGGCCAGGTTGTGTGTGAGATTAAAATTGATTGA