Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22370 LG5 53860129 53861959 PREDICTED: disease resistance protein RPM1-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
A/T 53860168 intron_variant
G/A 53860335 missense_variant p.Pro542Leu
T/A 53860338 missense_variant p.Asp541Val
T/A 53860391 synonymous_variant p.Ser523Ser
T/G 53860394 synonymous_variant p.Ile522Ile
C/T 53860397 stop_gained p.Trp521*
T/G 53860839 missense_variant p.Asn374Thr
A/T 53860897 missense_variant p.Leu355Met
C/T 53861283 missense_variant p.Cys226Tyr
A/T 53861353 missense_variant p.Phe203Ile
C/T 53861566 missense_variant p.Val132Met
G/T 53861576 synonymous_variant p.Leu128Leu
A/C 53861663 synonymous_variant p.Val99Val
C/T 53861698 missense_variant p.Ala88Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22370.1
MADPLGSSSLRSATRENLTEKLREYFIDKRCLIVLDDVKELKVWDVIQFAIPQHRVIITTQRDDFPNNIGGDTSVEKIKLEPLSLEDALKLFHQKVKHVQFPELSQLSKEFMEKCNGVPLAIVAISSLLSTVKSAIEWRRVRDDLGSLLRSHHHLETVRHVLLQSYQELPYRLKQCFLYFGHFPQGYSISCKRLIRLWIAEDFVEGDTQNKSMEELGGEYLAELICRGLVHASRVDFDGIPRSCHVYNLMHEIISSICKDQMFCHVMEDVSTPVNSNMDFIHRRLSIIKKNDSATMERDQKWGKVRSCFVFDDAKKWQVNNHFFSSFEFLIRLDLSDACLSVDVLPEQVGNLLNLKYLSLRNTNIMSLPESIGNLVNLQTLDLKQTKLHEVKIDKLVKLRHLLAYYVSDQSSEWYCLEGLRLSEGVQNLESLQNLSYLDVTGGRIIKGLQKLTKLRKLGIIKLEAKHCEALCNSIEHMINLCSLSIGALGKQDMLKLQSLNPPLSLKRLYLYGRLGELPSWISTLPNLIRLYLKWSDLKQDPLHYLKDLPQLLYLELYDAYKGERLDFGNGWLKLKGDAIK*


CDS Sequence:
>Vu_22370.1
ATGGCAGATCCTCTTGGATCATCTTCATTGAGGAGTGCAACAAGGGAGAATCTTACAGAAAAATTGAGAGAATACTTCATAGATAAGAGATGCCTCATCGTGTTAGATGATGTGAAGGAACTAAAAGTTTGGGACGTTATCCAATTTGCCATACCTCAACATCGGGTTATTATCACTACACAACGTGATGATTTTCCAAATAATATTGGAGGTGATACATCTGTTGAAAAAATCAAGTTAGAACCTTTGTCTTTAGAAGATGCTTTGAAGCTCTTTCACCAGAAGGTTAAGCATGTTCAATTCCCTGAGTTAAGTCAATTGTCCAAAGAATTCATGGAAAAATGCAATGGGGTGCCTCTAGCCATTGTGGCCATTTCTAGTCTCCTTTCCACTGTGAAATCTGCCATTGAATGGCGAAGGGTACGTGATGATCTTGGTTCATTATTGCGAAGTCACCATCATCTTGAAACGGTCCGACATGTATTGTTGCAAAGTTACCAAGAACTTCCTTATCGCCTCAAACAATGCTTCTTATACTTTGGCCATTTCCCTCAAGGCTATTCCATTAGTTGCAAGAGGCTTATTCGCTTGTGGATAGCAGAGGATTTTGTAGAAGGAGATACCCAGAACAAATCAATGGAGGAACTTGGAGGTGAATACCTGGCTGAACTAATCTGTAGAGGCTTGGTTCATGCTTCACGAGTTGATTTTGATGGAATACCTAGAAGCTGTCATGTGTATAACCTCATGCATGAGATCATATCTAGTATTTGTAAAGACCAAATGTTTTGTCATGTAATGGAAGATGTAAGCACACCAGTGAACTCCAACATGGATTTCATTCATAGGCGTTTATCAATTATAAAGAAGAATGATTCTGCTACTATGGAAAGAGACCAAAAGTGGGGAAAAGTTAGGTCTTGTTTTGTTTTCGATGATGCTAAGAAGTGGCAGGTGAACAACCATTTTTTCTCTAGTTTTGAGTTTCTGATTCGATTAGACTTGTCTGATGCATGTCTATCTGTCGATGTTCTTCCTGAACAAGTTGGTAATCTATTAAACTTGAAATACTTGAGCCTAAGGAACACCAACATCATGTCACTTCCAGAGTCCATTGGAAACCTAGTGAATCTGCAGACTCTAGACCTAAAACAAACTAAATTGCATGAAGTGAAGATCGATAAGCTTGTCAAATTACGCCATCTCCTAGCTTACTATGTCAGTGATCAAAGTTCAGAATGGTACTGTTTAGAAGGACTAAGGTTAAGTGAAGGAGTTCAAAATCTAGAATCATTGCAGAATCTATCATATTTAGATGTAACTGGTGGTAGAATAATAAAGGGACTGCAAAAACTAACAAAGTTAAGGAAGCTGGGAATTATAAAGCTAGAAGCAAAACATTGTGAAGCACTGTGCAATTCTATAGAGCACATGATCAATCTATGTTCTCTAAGCATTGGGGCTTTAGGAAAACAAGACATGCTAAAGTTACAATCTTTAAATCCTCCATTGTCCCTTAAACGCCTTTACCTATATGGGCGTTTAGGAGAACTTCCTAGTTGGATATCAACTCTTCCAAATCTTATCAGATTGTACTTGAAGTGGTCTGATCTAAAGCAAGATCCATTACATTACCTTAAGGACCTGCCACAATTGTTGTACCTTGAGTTGTATGATGCATATAAAGGTGAACGGTTGGATTTCGGTAATGGATGGTTGAAACTGAAGGGAGATGCCATCAAATGA


Promoter Sequence:
>Vu_22370::LG5:53861959-53863959(-)
GTAGAGATTTAGGGTTTTCTTAAAAAAGTAAAAATGTAAAAAAGTAAAAGATTAAAGTAAAAAAGATAGTTTTGTAATTAAAATATTTTTGTGGAAGTGTAGGAACCAGTTGGAGTGGTGAGGGAGTAGCTCTCAGTAACGTTTTACTTTTCAAAAAAATATTGTTATTGTTGTTTACATGGGCTAAGCCCTTTTATTTTTTAAAGAAATACTATTACTTGCGTGGGCTAAGTAGTGTGGACTAAACCCTCACTAATATTTTAGTTTTTAAAAAATCTTTTTACTTGCGTGGGCTTAGCTCTTGCTATAAAGTTTTATTTTAGAAAAAGAATATTCTTACTTACTTATGGCTAAGCCCTCGCTAACATTTTATTTTTTTTTTAGAAAATATTGTTACTTGTTTGGGTTAAGCCCTCATTACATATTTAATTTTTAATATTAAGCAAAGGTACTTTATACTTCATCTCCCTCCTAGAACCTTTGAAAATGCTTCTTTCATCTCTTTACAGCAGGTTATCATTCTTGTCCATCTCCCTCTTCTTGTCTCTATCACCCACACTACCAAAAACATTTGGTATTACCAATAGCTAGCTAGGATTCGTTTGTAACAAGTAAAATCCATTGTTAACTCTTATTTTCCAATAGAATATCAACGACATAAATTTTTTTAATAATTTACTCGTTTGTAAAAATTACAGACAGATTTAAAAAAACCTTGTGTACCATCGATAATAACCAAATTTAAAAAATGACTGTATTATATACAACAAGTATAGAGATTTATATTCTCTGCACCCAAACAAAACCTGCCAAAATTATATACAATACTAAACAAGAAAGGGATAAACTATAAACTATTGAAGTATTAATATTATGTAATGAAAACTCATATACAATATGAAAAGTCCTACATAATCAAAACTCTTAATTATATAAACTCTTAATTATGAAAACTCCTAACAGTTAAAACTTCTACCACTACTAAGATATAATTGGTTTTTCTATTTTAAACTAGAACAATCTTAGACATTAATCGCATGCTAGGAGATACTCTACCAATCTCAAACACATTCATGGTCTTACTTTCCCAACCTTGAGTGCTAAGAACTCATGAAACTATCACGATACGAAGAAAAAAAACTAAGATCTCTCAATCTACATCTAAGCAACAAGGACTACGAAAATATCAACAACAAATATCATATTAATTATTATACATTACAAAATTATGTTAATTATAGTTTCAACTAATATCACCTAGATAAAAAATGTGGTTCCTGGACAAAAAAGCAAATTGGCCCTTATAAGTAAGGAGGAGGTAGGGAAATACCACGTTGTGAAAACAAGTATAAATCAATAAAACCTAAATGTAAAAGATGACAAGCAATAAATAAGAAAATAATTGAAAGTGATACACAAACAAAACCTAAGGAATAAGTCTAGAACATAATGATAAAATTATTTAATAAAATAAAAGACATAAAGCAAGTTGAATATACCATCAAATTGGTAAAATCATTTCAAATTTGTTTCCAAAAATTAACATGCATATACATTCATCCAAACCAACTTTTATTATTTAATATTGCAATAGACTAATAGCCCTAATAGCTTTTAATTTAAACATTCATTCAACTTTAAAAAAAAATCCTATAAGTGACATAAATCATATAGCAGATTTGTTGTTTAAATAAATGAATAAAATAACCCCTACTTGAAATTTAATTGAAATCCAAGTAAAATTTAATATTAGTTGAAAATTCTTGTTAAAAATGTTTAAAATATTGTAATTGTGGTATACAAGTAAATTATATTGCCTAATAACATTTATATTTTGTGATATTTTTTAAGGTAAAACTTCAATAGTGAAGAATGTGTATAACAAGCAAACAAAATTGAACCAGCCGAAGAAAAAGAAGGATTTCGACTTTTGTGTATGGATAACCATGACTCAAGCTGATTCTTGGTACCCAATAATGCAAATTAAAGAAAAAATACTT


Gene Sequence:
>Vu_22370(-)
ATGGCAGATCCTCTTGGATCATCTTCATTGAGGAGTGCAACAAGGGAGAATCTTACAGAAAAATTGAGAGAATACTTCATAGATAAGAGATGCCTCATCGTGTTAGATGATGTGAAGGAACTAAAAGTTTGGGACGTTATCCAATTTGCCATACCTCAACATCGGGTTATTATCACTACACAACGTGATGATTTTCCAAATAATATTGGAGGTGATACATCTGTTGAAAAAATCAAGTTAGAACCTTTGTCTTTAGAAGATGCTTTGAAGCTCTTTCACCAGAAGGTTAAGCATGTTCAATTCCCTGAGTTAAGTCAATTGTCCAAAGAATTCATGGAAAAATGCAATGGGGTGCCTCTAGCCATTGTGGCCATTTCTAGTCTCCTTTCCACTGTGAAATCTGCCATTGAATGGCGAAGGGTACGTGATGATCTTGGTTCATTATTGCGAAGTCACCATCATCTTGAAACGGTCCGACATGTATTGTTGCAAAGTTACCAAGAACTTCCTTATCGCCTCAAACAATGCTTCTTATACTTTGGCCATTTCCCTCAAGGCTATTCCATTAGTTGCAAGAGGCTTATTCGCTTGTGGATAGCAGAGGATTTTGTAGAAGGAGATACCCAGAACAAATCAATGGAGGAACTTGGAGGTGAATACCTGGCTGAACTAATCTGTAGAGGCTTGGTTCATGCTTCACGAGTTGATTTTGATGGAATACCTAGAAGCTGTCATGTGTATAACCTCATGCATGAGATCATATCTAGTATTTGTAAAGACCAAATGTTTTGTCATGTAATGGAAGATGTAAGCACACCAGTGAACTCCAACATGGATTTCATTCATAGGCGTTTATCAATTATAAAGAAGAATGATTCTGCTACTATGGAAAGAGACCAAAAGTGGGGAAAAGTTAGGTCTTGTTTTGTTTTCGATGATGCTAAGAAGTGGCAGGTGAACAACCATTTTTTCTCTAGTTTTGAGTTTCTGATTCGATTAGACTTGTCTGATGCATGTCTATCTGTCGATGTTCTTCCTGAACAAGTTGGTAATCTATTAAACTTGAAATACTTGAGCCTAAGGAACACCAACATCATGTCACTTCCAGAGTCCATTGGAAACCTAGTGAATCTGCAGACTCTAGACCTAAAACAAACTAAATTGCATGAAGTGAAGATCGATAAGCTTGTCAAATTACGCCATCTCCTAGCTTACTATGTCAGTGATCAAAGTTCAGAATGGTACTGTTTAGAAGGACTAAGGTTAAGTGAAGGAGTTCAAAATCTAGAATCATTGCAGAATCTATCATATTTAGATGTAACTGGTGGTAGAATAATAAAGGGACTGCAAAAACTAACAAAGTTAAGGAAGCTGGGAATTATAAAGCTAGAAGCAAAACATTGTGAAGCACTGTGCAATTCTATAGAGCACATGATCAATCTATGTTCTCTAAGCATTGGGGCTTTAGGAAAACAAGACATGCTAAAGTTACAATCTTTAAATCCTCCATTGTCCCTTAAACGCCTTTACCTATATGGGCGTTTAGGAGAACTTCCTAGTTGGATATCAACTCTTCCAAATCTTATCAGATTGTACTTGAAGTGGTCTGATCTAAAGCAAGATCCATTACATTACCTTAAGGACCTGCCACAATTGTTGTACCTTGAGTTGTATGATGCATATAAAGGTGAACGGTTGGATTTCGGTAATGGATGGTTGAAACTGAAGGTTTTGTACTTAGGATTGTTGCCAAACTTGAAGACCATAGAGATTGGTAAGGGAAAAGTTCCTTGTCTTGAAATATTGAAGATAGGGAGATGCCATCAAATGA