Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22313 LG5 52874112 52876751 disease resistance protein RPM1-like isoform X1
Map

Annotations  
category   relationship type   keyword
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
A/C 52874217 missense_variant p.Asn845Lys
C/T 52874660 missense_variant p.Glu698Lys
T/C 52874663 missense_variant p.Asn697Asp
A/G 52874671 missense_variant p.Phe694Ser
G/C 52874678 missense_variant p.Leu692Val
G/C 52874695 missense_variant p.Ala686Gly
G/C 52874749 missense_variant p.Thr668Arg
T/C 52874767 missense_variant p.Asp662Gly
G/A 52874877 synonymous_variant p.Leu625Leu
G/A 52874932 missense_variant p.Thr607Ile
T/C 52874933 missense_variant p.Thr607Ala
A/G 52874952 synonymous_variant p.Gly600Gly
G/T 52874974 missense_variant p.Thr593Lys
A/T 52875015 missense_variant p.Phe579Leu
T/C 52875073 missense_variant p.Lys560Arg
C/T 52875098 missense_variant p.Val552Ile
C/T 52875176 missense_variant p.Glu526Lys
T/A 52875180 synonymous_variant p.Pro524Pro
G/C 52875181 missense_variant p.Pro524Arg
T/A 52875233 missense_variant p.Ser507Cys
A/G 52875236 missense_variant p.Ser506Pro
T/C 52875239 missense_variant p.Lys505Glu
C/G 52875773 missense_variant p.Asp327His
G/T 52875775 missense_variant p.Ser326Tyr
C/T 52875785 missense_variant p.Gly323Ser
A/C 52875840 missense_variant p.Asn304Lys
A/C 52875855 synonymous_variant p.Leu299Leu
G/A 52875857 missense_variant p.Leu299Phe
G/C 52875868 missense_variant p.Thr295Arg
T/A 52875869 missense_variant p.Thr295Ser
A/C 52875871 missense_variant p.Phe294Cys
T/G 52875876 missense_variant p.Lys292Asn
G/T 52875880 missense_variant p.Ala291Glu
C/T 52875886 missense_variant p.Ser289Asn
T/C 52875890 missense_variant p.Lys288Glu
T/C 52875920 missense_variant p.Lys278Glu
C/T 52875926 missense_variant p.Glu276Lys
T/A 52875930 missense_variant p.Lys274Asn
T/C 52875932 missense_variant p.Lys274Glu
C/T 52875947 missense_variant p.Glu269Lys
G/C 52875952 missense_variant p.Thr267Arg
C/T 52875956 missense_variant p.Glu266Lys
T/G 52875963 missense_variant p.Lys263Asn
T/C 52875965 missense_variant p.Lys263Glu
A/G 52875978 synonymous_variant p.Asp258Asp
A/T 52876072 missense_variant p.Phe227Tyr
C/A 52876083 missense_variant p.Met223Ile
C/T 52876091 missense_variant p.Gly221Arg
A/G 52876097 missense_variant p.Phe219Leu
C/A 52876116 missense_variant p.Gln212His
G/C 52876118 missense_variant p.Gln212Glu
T/G 52876135 missense_variant p.Glu206Ala
A/T 52876144 missense_variant p.Val203Asp
A/T 52876148 missense_variant p.Phe202Ile
G/T 52876149 missense_variant p.Asn201Lys
A/T 52876185 synonymous_variant p.Leu189Leu
C/G 52876208 missense_variant p.Ala182Pro
A/C 52876210 missense_variant p.Val181Gly
G/T 52876264 missense_variant p.Thr163Lys
A/T 52876268 missense_variant p.Leu162Met
C/T 52876349 missense_variant p.Val135Ile
G/C 52876369 stop_gained p.Ser128*
T/G 52876371 missense_variant p.Gln127His
C/T 52876527 synonymous_variant p.Lys75Lys
G/A 52876582 missense_variant p.Thr57Ile
T/C 52876685 missense_variant p.Met23Val
C/T 52876687 missense_variant p.Arg22Lys
A/C 52876729 missense_variant p.Val8Gly
T/G 52876741 missense_variant p.Glu4Ala
C/T 52876742 missense_variant p.Glu4Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22313.1
MEEEALEVGKCILKLLWEAFKRMKDLPKVVDEIQTELDELKNLINLEEQRLMKERKTAFLAEDVIDEFETRIKEKQPQDDRGWAAFPAKAVYHIQTLIPRFLISYKVNDILSDVRNTKERLQRNRPQSTQNNNNVTFHHCRMDPLFMEEEEVVGLAGPTKILTDWLENGQRERTVIFVVGVAGVGKTTLAKHVYDKVICSNFVHHEFFTVSQSNTVEEFLGVMYRHFMKSEPPSDYSILKNEVRGYLRGKRYVLLFDDVWEDKFWETIETALIKNENKSRIIITTRKKSVAKSFTNSTLFKKYNLEEPLTEEECLRLLHKKAGYSSDCPEELKDISLEIVSKCSALPLAIEVVGRVLSQKDRSAHEWGLFSEELNWNLTNPTNPEFNIIEKVIGLSYDNLPTHLRLCLLYFGMYPKHYEIKSGRLVRQWVAEGFVTHEERKTLEEVAQEYLLGLVHTSLVQVASFSMKGKVKTCRVHDLIHNMIRTKVKHTYFGEYIGGGHDQSKSSELVRRLAIETNNDLNRPIERSHIRSIISIPGKQEESWSSDLERNVLKDDMPLKVLDFEGCGLLCVPKMLGNFIYLRYLSFRGTQITVLPKSIGKLVNLETLDIRQTQVLELPKEITKLRKLLHLLTPDSAFSSIEWKDIGGMTKLQKIPQVRMEDDGVAITEVGKLKQLRVLRVLCFGAEHITLLFFSINEMEHLQALRIEKSGDRIVVDLNTASMSGGSRLRKLFLDMKLERLPNWFPQLRHLERLTLRHSDLSSDPLESLKDMPSLLVLSLSHAYEGQTLHFQSGGFKKLRKLNLEHLWNLNSILIDETALQALEYFELTCLDDLRTVPDGIQHLNKLKFVRVPYMPTQFVEEIDRIGKDKPWRINYGYM*


CDS Sequence:
>Vu_22313.1
ATGGAAGAGGAAGCGTTAGAGGTTGGTAAATGTATTCTGAAATTACTTTGGGAAGCCTTCAAAAGGATGAAAGATCTCCCAAAAGTAGTTGACGAGATTCAAACTGAACTTGACGAGTTGAAAAACTTAATCAATTTGGAGGAGCAAAGGTTGATGAAGGAGAGAAAAACAGCATTTCTCGCGGAAGATGTGATTGACGAGTTCGAGACACGTATTAAAGAAAAGCAACCTCAAGATGATCGTGGATGGGCAGCGTTCCCCGCTAAGGCTGTTTACCACATCCAAACTCTCATCCCTCGATTTCTAATATCATATAAGGTTAATGATATTTTATCAGATGTTCGTAACACAAAGGAGCGTTTACAAAGAAATCGTCCACAATCAACACAAAACAACAACAATGTCACATTTCATCATTGTCGAATGGATCCTCTCTTTATGGAGGAAGAGGAGGTTGTTGGACTTGCTGGACCTACAAAGATATTGACAGATTGGTTAGAAAATGGACAAAGGGAACGCACTGTGATTTTTGTTGTGGGTGTTGCAGGAGTTGGAAAAACCACTCTTGCCAAGCATGTTTATGACAAGGTCATCTGTAGCAACTTTGTTCACCATGAATTCTTCACAGTGTCTCAGTCCAACACTGTAGAAGAATTTTTGGGGGTTATGTACAGGCATTTCATGAAAAGCGAGCCACCTTCCGATTATTCTATTTTGAAAAATGAAGTCAGAGGTTACTTGCGTGGGAAGAGGTATGTTCTCTTGTTTGATGATGTATGGGAGGACAAATTTTGGGAAACAATTGAAACGGCTTTGATTAAAAATGAAAATAAAAGTAGGATAATAATCACAACAAGGAAAAAGAGTGTTGCGAAATCTTTTACGAATTCTACTCTTTTTAAAAAATACAATCTTGAAGAACCTTTAACTGAAGAAGAATGTTTGAGGTTGCTCCATAAGAAGGCAGGTTATAGTTCTGATTGTCCAGAAGAACTTAAAGATATATCTCTTGAAATTGTTAGCAAGTGTAGTGCTTTACCTCTAGCAATCGAGGTCGTTGGACGAGTCTTGTCACAAAAAGATAGAAGTGCACATGAGTGGGGACTGTTTAGTGAAGAGTTGAACTGGAATCTGACGAATCCGACGAATCCTGAATTTAATATTATAGAAAAAGTTATAGGTTTAAGTTATGATAATTTGCCGACCCATCTCAGGTTATGTTTATTGTATTTCGGAATGTATCCGAAACATTATGAAATTAAATCTGGGAGATTGGTTAGGCAATGGGTGGCTGAAGGATTTGTTACCCACGAAGAGAGAAAAACTTTAGAAGAAGTTGCACAGGAATATTTACTAGGGTTGGTCCATACAAGTTTGGTGCAAGTGGCATCATTTTCCATGAAAGGAAAAGTGAAAACATGTCGTGTTCATGACTTAATACACAATATGATCCGTACAAAAGTGAAGCATACATATTTTGGCGAGTATATTGGCGGAGGGCATGATCAATCTAAGTCAAGTGAGTTGGTTCGACGTCTGGCAATTGAAACCAACAATGATTTAAATAGACCAATTGAAAGATCACACATTCGGTCAATTATAAGCATTCCAGGAAAACAAGAAGAATCATGGTCTTCCGATTTGGAAAGGAATGTTCTTAAAGATGACATGCCATTGAAGGTACTTGATTTTGAGGGTTGTGGATTACTTTGTGTTCCTAAAATGTTGGGGAATTTTATCTACCTGAGGTATTTAAGCTTTAGGGGGACGCAGATAACAGTTCTTCCAAAATCCATAGGTAAGCTCGTGAACTTGGAGACCTTGGATATACGACAAACGCAAGTGCTTGAGTTGCCGAAGGAGATCACAAAGCTCAGAAAGTTACTGCATCTTCTGACACCTGACTCTGCATTTTCTTCAATTGAATGGAAGGATATTGGAGGCATGACAAAGCTGCAAAAGATACCACAAGTGCGTATGGAGGATGATGGAGTGGCCATTACAGAGGTAGGGAAGTTAAAGCAGTTAAGGGTTCTGAGGGTGCTTTGTTTCGGCGCAGAGCACATTACTTTACTTTTCTTCTCAATCAATGAGATGGAACACTTGCAAGCACTACGCATTGAAAAATCTGGTGATCGCATTGTGGTTGACTTGAACACTGCGTCAATGTCTGGTGGGTCAAGACTTAGGAAGCTTTTCCTTGATATGAAGTTAGAAAGGTTACCAAATTGGTTTCCCCAACTCCGTCATCTTGAGAGATTGACCTTGCGCCACTCTGACTTAAGCAGTGATCCCTTGGAATCACTAAAAGATATGCCTAGTTTGTTGGTGCTCTCTTTATCCCACGCTTATGAAGGTCAAACTTTGCATTTTCAATCGGGAGGGTTCAAGAAACTGAGAAAGCTAAATCTCGAACATCTTTGGAACTTGAATTCGATCCTTATTGATGAGACAGCACTGCAGGCTCTGGAATATTTTGAGTTGACATGCCTGGATGATCTCAGAACTGTCCCCGATGGCATTCAACATCTGAATAAACTTAAATTTGTTCGTGTCCCTTATATGCCAACTCAATTTGTTGAGGAAATTGATCGCATTGGTAAAGACAAGCCCTGGAGAATCAATTATGGCTATATGTGA


Promoter Sequence:
>Vu_22313::LG5:52876751-52878751(-)
TTAATTTTTTTTTAATAATTTTTTTTAATAATTTTTTTTACAAAAAAGTAGAAAAGAGCTTGAACCCATATTCTTGAAATCATTACAATTTTCTACCATTTAAGCTACCAAAATTTCTATATTTAACTTATTAATTATATTTTCCATTCACAAAGAAATTTATTACTACTAGTAATAAAATTGTTACAATTAAGGTAAATATTTTTCATGGATCTTATAGTAAATAAGTTTCAAGTCTTTTATAAATTTATGTATTTTTAATTGATTTAATATTAAAATTTTTCTCTCAGCATTCAAATTTTTTATATTTTTGAATTAAATTCATGTTATTTAATTTTTTTCGTTAATTGGTAACGTAGATGTGATCTTATCTTATTTTTTTGCTTTCACATATTGAAAAAAGTATGATATTTTGTGATTAATATAAAATAACATATTTAACGTGTCCTATTTCTTTATTAAATTTTTTGGTCTGTTATGTTTTTAAAATACATTAATTTTGGTATATTAAAAAGATTTTTAGTATATTAAAAAGATTTTTAGTATATTTTAAAACAATAAAATTAATGTAGGTGTATTTAAAAACACGATACTGAAAAATTAAAAAAAAAAATACTCAATGATAATCCAAATTTCTGTTTAACTTAATCATAAATAAAATATATTTCAACATAATTAAAATTGAATTGGGATAAGTTAGATTGTGTTGGTTGGATCAATGTTAACCCGACTCAATGAATTATAGGATACAAGTTTTGCCATGGTAAATTGCACATAAAATAGAAATGTGAGAATTTGATTCAAAGAATAAAATCATTTTTTTATATTAATAAAACCTCTTAACACATAACAAAAAAGTAGACAACAATCATGTCACTCAATTAATGAAAATTTTATACAATATGAATTCAATTAAAAAATATCAATTTTTTAATATCTCTAATTGTAATTTTCTTAGGGTTCAATTGAAAATATATAAGAAGGGAATTTAAACTTAATTAAATCTTTATTTTTGAATAGATATTGAGTAAAATTAATTGTAGAAAGTATCGGACAAATATAATTAATTGTACAACTACCGCTCTTACAAAATAAATAGGAAAGACCAACCAACAAAACGTTTAATAAGGATGCTGAAAGCTCAAAGTCATGGTACGCTATACAATATACAATGATTGCATGAATAAAAGTAGACCTAATTACTTGTATATTTTATTCAATTTGATATTCTATTAACAATTTAATTAAACTGGATAAAAATCGTCATATCATTACATATTTAAAAATTAAATTAAGTTGAAAAGATATAGAAAATAATAAAATTAAGGAGACAATTACAGAAGAAGTACATGATTCAGATAAAGAACATATTGGAAACAATGTGAGACAAATAATGATCATTCTACTCATTAAATAAGTTTGAAGTGAAAGAACTATGTTATTTATTAGTGAAAAAATTGGATTCTTAGATTATTTATTATTATGTAAGTTATATTCACTTACAATAACGTTAATATAATTATAAATTTGATGATATTTTTTATATTGAATATCATTGAAATCGACTTAAAAATGAGAATAATGACTATTTTATAATAAACTACAGGATTTTTTAAAGTTGATTGTAAGTTTAGTTAACATAAAAGATGATATTTTATGTGATTGTGGTCATATTTAATATAAAAAGTGACTTTTATTACAGAGTTTTTTATTTTCGAATAAAATTTTTATGGTGAGTCCAGAATCAACATAAAATATCAACTTTCTATATATTTTAAATTTGTGTAGAAATCGCAAATTTTTTATGTCGGTGGTATTTATACCAATTATGAAAGCAGCCTAGAAAGTCTTTTTTTGAATTTGCGCTCTACTTATTATTATTAAGTAAAGATTAATCTCAAGCCTATTATTCGTAGTGTATATATATGTATCGTTAACTTGAAGTATTGCACTCATCACTACCACACAGCAAAAACAGAGTGAGAGAGAATTACACTAAA


Gene Sequence:
>Vu_22313(-)
ATGGAAGAGGAAGCGTTAGAGGTTGGTAAATGTATTCTGAAATTACTTTGGGAAGCCTTCAAAAGGATGAAAGATCTCCCAAAAGTAGTTGACGAGATTCAAACTGAACTTGACGAGTTGAAAAACTTAATCAATTTGGAGGAGCAAAGGTTGATGAAGGAGAGAAAAACAGCATTTCTCGCGGAAGATGTGATTGACGAGTTCGAGACACGTATTAAAGAAAAGCAACCTCAAGATGATCGTGGATGGGCAGCGTTCCCCGCTAAGGCTGTTTACCACATCCAAACTCTCATCCCTCGATTTCTAATATCATATAAGGTTAATGATATTTTATCAGATGTTCGTAACACAAAGGAGCGTTTACAAAGAAATCGTCCACAATCAACACAAAACAACAACAATGTCACATTTCATCATTGTCGAATGGATCCTCTCTTTATGGAGGAAGAGGAGGTTGTTGGACTTGCTGGACCTACAAAGATATTGACAGATTGGTTAGAAAATGGACAAAGGGAACGCACTGTGATTTTTGTTGTGGGTGTTGCAGGAGTTGGAAAAACCACTCTTGCCAAGCATGTTTATGACAAGGTCATCTGTAGCAACTTTGTTCACCATGAATTCTTCACAGTGTCTCAGTCCAACACTGTAGAAGAATTTTTGGGGGTTATGTACAGGCATTTCATGAAAAGCGAGCCACCTTCCGATTATTCTATTTTGAAAAATGAAGTCAGAGGTTACTTGCGTGGGAAGAGGTATGTTCTCTTGTTTGATGATGTATGGGAGGACAAATTTTGGGAAACAATTGAAACGGCTTTGATTAAAAATGAAAATAAAAGTAGGATAATAATCACAACAAGGAAAAAGAGTGTTGCGAAATCTTTTACGAATTCTACTCTTTTTAAAAAATACAATCTTGAAGAACCTTTAACTGAAGAAGAATGTTTGAGGTTGCTCCATAAGAAGGCAGGTTATAGTTCTGATTGTCCAGAAGAACTTAAAGATATATCTCTTGAAATTGTTAGCAAGTGTAGTGCTTTACCTCTAGCAATCGAGGTCGTTGGACGAGTCTTGTCACAAAAAGATAGAAGTGCACATGAGTGGGGACTGTTTAGTGAAGAGTTGAACTGGAATCTGACGAATCCGACGAATCCTGAATTTAATATTATAGAAAAAGTTATAGGTTTAAGTTATGATAATTTGCCGACCCATCTCAGGTTATGTTTATTGTATTTCGGAATGTATCCGAAACATTATGAAATTAAATCTGGGAGATTGGTTAGGCAATGGGTGGCTGAAGGATTTGTTACCCACGAAGAGAGAAAAACTTTAGAAGAAGTTGCACAGGAATATTTACTAGGGTTGGTCCATACAAGTTTGGTGCAAGTGGCATCATTTTCCATGAAAGGAAAAGTGAAAACATGTCGTGTTCATGACTTAATACACAATATGATCCGTACAAAAGTGAAGCATACATATTTTGGCGAGTATATTGGCGGAGGGCATGATCAATCTAAGTCAAGTGAGTTGGTTCGACGTCTGGCAATTGAAACCAACAATGATTTAAATAGACCAATTGAAAGATCACACATTCGGTCAATTATAAGCATTCCAGGAAAACAAGAAGAATCATGGTCTTCCGATTTGGAAAGGAATGTTCTTAAAGATGACATGCCATTGAAGGTACTTGATTTTGAGGGTTGTGGATTACTTTGTGTTCCTAAAATGTTGGGGAATTTTATCTACCTGAGGTATTTAAGCTTTAGGGGGACGCAGATAACAGTTCTTCCAAAATCCATAGGTAAGCTCGTGAACTTGGAGACCTTGGATATACGACAAACGCAAGTGCTTGAGTTGCCGAAGGAGATCACAAAGCTCAGAAAGTTACTGCATCTTCTGACACCTGACTCTGCATTTTCTTCAATTGAATGGAAGGATATTGGAGGCATGACAAAGCTGCAAAAGATACCACAAGTGCGTATGGAGGATGATGGAGTGGCCATTACAGAGGTAGGGAAGTTAAAGCAGTTAAGGGTTCTGAGGGTGCTTTGTTTCGGCGCAGAGCACATTACTTTACTTTTCTTCTCAATCAATGAGATGGAACACTTGCAAGCACTACGCATTGAAAAATCTGGTGATCGCATTGTGGTTGACTTGAACACTGCGTCAATGTCTGGTGGGTCAAGACTTAGGAAGCTTTTCCTTGATATGAAGTTAGAAAGGTTACCAAATTGGTTTCCCCAACTCCGTCATCTTGAGAGATTGACCTTGCGCCACTCTGACTTAAGCAGTGATCCCTTGGAATCACTAAAAGATATGCCTAGTTTGTTGGTGCTCTCTTTATCCCACGCTTATGAAGGTCAAACTTTGCATTTTCAATCGGGAGGGTTCAAGAAACTGAGAAAGCTAAATCTCGAACATCTTTGGAACTTGAATTCGATCCTTATTGATGAGACAGCACTGCAGGCTCTGGAATATTTTGAGTTGACATGCCTGGATGATCTCAGAACTGTCCCCGATGGCATTCAACATCTGAATAAACTTAAATTTGTTCGTGTCCCTTATATGCCAACTCAATTTGTTGAGGAAATTGATCGCATTGGTAAAGACAAGCCCTGGAGAATCAATTATGGCTATATGTGA