Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22104 LG5 44908857 44909662 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 44908864 stop_lost p.Ter202Cysext*?
A/T 44909090 synonymous_variant p.Arg147Arg
T/A 44909140 intron_variant
C/T 44909141 intron_variant
A/G 44909231 missense_variant p.Met120Thr
T/C 44909322 intron_variant
C/T 44909331 intron_variant
C/T 44909332 intron_variant
C/T 44909340 intron_variant
C/T 44909342 intron_variant
A/T 44909425 missense_variant p.Ser80Thr
G/A 44909610 missense_variant p.Pro18Leu
C/G 44909618 synonymous_variant p.Pro15Pro
G/A 44909633 synonymous_variant p.Phe10Phe
A/G 44909634 missense_variant p.Phe10Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22104.1
MPTISSPAQFPPPSPHSPAQSVPFPSPSPPCPSSVISTWRQLFLRPDPSRVWHLAAPNELMGNIPGAWKPHRAWKHPPSSPPRRHPVGDWKLVPACPFQRFVNALSGSLTPELGNLKSLMSMDLSNNVLSGEVPTRSQPSAPTPPSSFLKLKYIRLGLEEGKVGGKEEGGDVTRCDKEKWDGMGCDTVAQIHAINGLGSVMTEA*


CDS Sequence:
>Vu_22104.1
ATGCCAACAATCAGTTCTCCGGCCCAATTCCCGCCTCCTTCTCCGCACTCTCCGGCCCAATCGGTCCCCTTCCCCTCACCATCGCCGCCATGCCCATCCTCCGTCATCTCCACCTGGCGGCAACTTTTTCTCCGGCCAGATCCCTCCCGTGTATGGCACTTGGCAGCACCTAACGAGCTCATGGGAAACATCCCCGGAGCTTGGAAACCTCACCGCGCTTGGAAACATCCTCCGTCATCTCCACCTCGGCGGCATCCCGTCGGAGATTGGAAGCTTGTCCCAGCTTGTCCGTTTCAACGCTTTGTGAATGCGCTCTCCGGCTCGCTCACTCCTGAGCTGGGGAACCTGAAGAGTCTCATGTCGATGGATCTGTCCAACAACGTTCTCTCCGGCGAGGTTCCGACGAGGAGTCAGCCGTCAGCTCCAACTCCTCCTTCTTCGTTTCTGAAACTGAAGTATATTAGGTTAGGACTAGAAGAAGGAAAAGTTGGAGGGAAGGAAGAAGGTGGGGATGTGACACGATGTGACAAGGAAAAGTGGGATGGGATGGGATGTGACACAGTTGCACAGATTCATGCCATTAATGGCCTCGGTTCTGTAATGACTGAGGCATAA


Promoter Sequence:
>Vu_22104::LG5:44909662-44911662(-)
GCTACGTTTATAAAATTATTGAACGGATTAGTGTTCTAATTTGTTAGTTGTTTTGAGTTTTAATTACAGATATTTGAAAGTTTTGAGTTAATATTTACGAGTTGTTTCAATGATTTATATTCATGTATACATTAAAACGGTTGTTTTGAGGTATCCTAAATTAGAGTGTTACATTTGTGGTATCATAACCAGGTTTTCAAAAAATCTTTTGGAGTCTTGTACAGTAAGTTTGGCTAGTTTTTGATGTGTAACTCTGGTTGTTATATCATTTCATGATGTGGAATGCTAATGAACGTGTTTGGTGGTGTTTTATTACTCTAAAGAACTAGTTGCCATTGAATTATTGTAAATTTTCACGGTTAAAAGTCATTTGATTTGTAAGTGTTGCTTAGTTCATTGTCTAGTTTGGACCAGGTGATTATATCATGTAATTGTGTTTCCTAATTATATCTACAATAAGCTTGATGCCTAGGTGGCTGTTATTGGGTAATCTTAATGCTTCTTGATGTGTTGCTCTGCTGTCATGATGCTTATTCTGATCTTGATAGAATTGTTCGGTTAATGAATTGAGTAATCAGTCATATAACTAGGGACTAGACTTTTCGGTGTTTCTTATAATATAAGCGAATTGTGGATAGATGATAATATGTTTTATACTATATGTTGGGTGAATGATGATAACTGACTGTCTATAGTTACAGTGGTTGAACTAAAGATATAAGTTGGTTACAGGCTACTTGAACAAGTAGAACGTAAATCCTTAATCTAGTGGTAAAAGATGAATTGACTAGGAAAGAAGTTAAATTGTTTTAGATGGTCACTTATTTATTTCATTAAGTCTGTTGGTATATAGAAAAATAAAGAATCATGTATCAGTATATTTTATGGGATCGAGAAACATACCTTACCGACGTGTCTTCCTTGCTTCCGGATGTCCATATCGCTCGCTTGTCCTTTGATGGTGTTGCTCGCTTGTCCTTTCTGGAAGTCGTTCGCACTCCTTCAGTTCGTACTGCTCGTCCACTTTCACCAACGGAGGGGGAGATACCTGCGAAGATACTCCGACGCTCAAGTCAGGCGTGAGTTATAGAGCCTCAGCTCTCAAGAAGGTGATTTTATTATCATTGTAGAATGTTATCTAGTGCCAATATAGCGTAAGTAGAACGTAGAGGGAACCTACTTGGACTTTTTCCCTGTTATTGTATTTATAAGTGTAAAAACAACCTTACCTGGAAACTTGGTTAGTTACTCATAAGTATCTTAACCGCTTAAAATATCTAAGATATTTTATCCAATAAATATCTTACTATACAAATCCTAATTTTTGTTAGTGATTAGATAGGGTAATATTGCTTGGTTGTTCTTGTACCAAATTTAAAGTGTGCATATGCTGTTTTTGTTATATCTGGCAATATAACCTACGCGTATTGTTGACATGTACTAGTGGAGTAAAGGGGTAATTCTGTTGACATGAGTATATACTTCAAATGAATGGAACTGCTAGTGATTCAGCTTTGGTTTAGGAAAGTGTCTATCTTGCATCCATGATGAGTTAACTGAGTATGAATGAATTTGTGGTAATGCTGCGTTGGCCGGTCCAAATGTTGTCTGGTTGCACTAAATTATTTCTCTGTTGCATCATGTTTTGCATGCAAAAGCCTTTACTGATTTATTATAGTTGCAATAATTGTCTATAGATATGATATAACTGTTGTTTTGGATGGATATTATTAGCACTAGTGCAATCAAGAGAAACGACAACGGTTATTTTCGCTTATAGACACCGGTTTTTCAACCGAGAAAATATTCAGACGAGATAAAAAGTGATAGATTTTATGCCACGGTTAACCGAAGCATAAAATGGTAGGATTATGCTTCGGTTCAAAATTAACTAAAGCAGTAACATTTTTTATTTTTTAAAATTTTATGCCTCTATTCCTTATGAACCGAGGTCGTTTCTCCCCCTCTCCTGTACCTCAATTTCATCTCCTACCTCTCCC


Gene Sequence:
>Vu_22104(-)
ATGCCAACAATCAGTTCTCCGGCCCAATTCCCGCCTCCTTCTCCGCACTCTCCGGCCCAATCGGTCCCCTTCCCCTCACCATCGCCGCCATGCCCATCCTCCGTCATCTCCACCTGGCGGCAACTTTTTCTCCGGCCAGATCCCTCCCGTGTATGGCACTTGGCAGCACCTAACGAGCTCATGGGAAACATCCCCGGAGCTTGGAAACCTCACCGCGCTTGGAAACATCCTCCGTCATCTCCACCTCGGCGGCATCCCGTCGGAGATTGGAAGCTTGTCCCAGCTTGTCCGTTTCAACGCTTTGTATTGCGGACTCTCCGGCGATATTCCGGCTGACCTCAGAAGGCTTCAGAATATGGACACGCTCTTTCTTCAGGTGAATGCGCTCTCCGGCTCGCTCACTCCTGAGCTGGGGAACCTGAAGAGTCTCATGTCGATGGATCTGTCCAACAACGTTCTCTCCGGCGAGGTTCCGACGAGGTTCCGACGAGCTGTGTGGAGCTCAAGAATCTAACTCTGCTGAACCTTAACCGTGTAGGAGTCAGCCGTCAGCTCCAACTCCTCCTTCTTCGTTTCTGAAACTGAAGTATATTAGTGAGATTATTATTAATGAGTGAAGCACGTGCTTGGTAAAGTAGCATTGTTATTTTTTAGGGTTAGGACTAGAAGAAGGAAAAGTTGGAGGGAAGGAAGAAGGTGGGGATGTGACACGATGTGACAAGGAAAAGTGGGATGGGATGGGATGTGACACAGTTGCACAGATTCATGCCATTAATGGCCTCGGTTCTGTAATGACTGAGGCATAA