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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22053 LG5 43175209 43175766 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 43175346 missense_variant p.Leu141Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22053.1
MPSPSSSSSAYSLYNSYMVSNFMVSIIVPLFLFSLFLVHVSSCSQIDKLSLLAFSGNISTSPPFPSLNWSDSLDCCAWEGITCDGDLRVTHLLLPSRGLTGFISPSLTNLSSLSHLNLSYNRLSGGLQHQLFSLLSDLVVLDLSYNHLSGELPPFVGDNSGKNSSGAAIQELDLSSYFFNVIALK*


CDS Sequence:
>Vu_22053.1
ATGCCATCACCATCTTCATCTTCCTCTGCATATTCCCTTTACAATTCTTACATGGTTTCCAACTTCATGGTCTCTATCATAGTCCCCTTATTCCTCTTCTCCTTGTTTCTTGTTCATGTTTCCTCTTGTAGTCAGATTGATAAACTCTCCCTCTTGGCTTTCTCTGGGAACATATCCACCTCTCCACCTTTTCCTTCTCTCAATTGGTCTGATTCTCTTGACTGCTGTGCTTGGGAAGGCATTACTTGTGATGGGGATCTTAGAGTCACACATCTTTTGCTACCTTCTAGAGGCCTCACTGGCTTCATCTCCCCCTCTCTCACAAACCTCTCTTCTCTCTCTCACCTTAATCTCTCCTATAACAGATTATCTGGTGGTCTCCAGCACCAGCTTTTTTCATTGCTCAGTGACTTGGTGGTTCTTGATTTGAGCTACAATCATCTGTCTGGTGAACTGCCACCTTTTGTCGGTGATAACAGTGGCAAAAATAGCAGTGGTGCTGCTATCCAGGAGCTGGATTTGTCCAGCTACTTTTTCAACGTAATCGCCTTAAAGTGA


Promoter Sequence:
>Vu_22053::LG5:43175766-43177766(-)
TTTTTTTAATGGTTCATGTATGGTTGACTTCTATTATGTTCTTCTTTCATGAACTTGGTTGAAATTCATAACTTGACTTGAAAATGTGAGCTAGATGATCTGACCGAATGATTTAACTTGATATGTGTATTGTTGATATGAACTTTTAAGAATGTAGATGTTGATCTTCAATACGATGTATGCTATGAGTTTCCCTCTTTATCTGAATCAATGGTTTCAGTATGATAGTTATGTTTAAGAAATAGAATTGAAATAAATTGCTTCTTTATGCTTTATTTCCTTCACTGAAGCTAGTAGTTCACTTGTACACGTTGAGGAAACATTTATTATGTTTTGTTTAATGAGTAAATAGCTATTGTATTTAGTTTAATGGTTTTGATGTGATTACCATATACATTGTTAATTGAGAAGCCATAAGTTGCTTTGGGTAATTGTAGCTTGATCAAAGAAAGGAAGCTCAAGCTCTTCCTCATCTTTGTTAATTTGTACTATCAAGGAATTACTTCATTCACAAGACGGAAAGATAATATTCCGTTAAACTCTAAAATGGCAAGTTATTGAATTTGTTTTTGTTTAGGAATTTGTGGATGCCCACACTGGCCACCTGCTAGCAGGGTTTAGCTCTGCAACTCCTTTCTCTGCCTCATCAAAAAACATCCTTGTCCTCTTTATCTGTCCCTTCATGAATTTACTAGGTTTATCTATAACTTTACCCAGGAAAATGTCATCATCCAAAAGCCTAGCTTTTGCCAATTCATCTTGTCCCTCCTCCTAGTTTACTTCCCCTTTGTTGACAATGGCATAGTACCTTATCTGCTACTCTTCTTTCTCTTAATTACGAATAATCTTCTGCAGATCAAGCTTTGTTTGTCAAATCTGCTTCTACTTCTTTTACTGCATTATTTGTTTAGGTGGATGATATTGTTTTAATTAGCAATGATATGGCAGAAATTAATCATCTTAAGCACATTTTAGATACCAAATTTAAAATCAAAGACCTAGGATCTTTAAGATACTTTCTCGGTCTTGAAATTGCAAGGTCCAAATCTGGAATTCACATGAATCAGAGAAAATATATTCTTGAACTTCTCGATTACAGTGGTTTGATTGGTTACTAACACTCCTTCTGATCCTTCTATTAAACTTATGGCAAATCATGGACAACTTTTATCTAATGCTGCTGGTTACTGGCAGTTAGTTGGCAAACTTTTGCATCTCACCATCATCAAGCAAGATATTGATTATGTGTACAACAACTCAGCCAATTTCTATGCAAACCTCTTGATACTTATTACAATGCTGCTCAAAGAATCTTTCATTACCTCAATGGATCCCCTGCTCATGGCTTGTTCTTCTTTGCTTAATCAGACCTTAGACTCTCGGCCTTTGCCAATTCAGATGAGCTTGCTGTTTGGATACCAGAAGGTCTATCATTGAGCTTACTGTTTCCTTTATGTAAGATACCTTTTTCTCAATTTGAATACAATGAGAATTCTTGCAAAATGTGAGAACTAAGAAAACTGTTGTGTCTGCAACCTCTATATAATATAACAACTCAACAACTATTTTCTACTTTCTTTAAGATCAATAGTAGAACAACAACTATATCAAAAATCTTTCTTTTCTTTTCTTTTCTTTTCTTGCTTCATCCACAGTTTTTCAAAATAAACATAAACACCAGATGAATATATTTACTATGAACTGCAATGAGTTGTTACAGTGGTAATGATAATTAAAATCTAAATATTATCTATGTGTATGTATATCTAAATCCCCAGTTGTCAACGTCACCCTTCCACTTTCTCTCTCTCTCTCCCACCCTTCATTTTGCTTCCCTTGTCAATGGATGGTCATGGTCTTCCTTGCTCCCATGCCACCCCAACTATCTCTTCTTACATTGGTTCTTGACCCCCTTATGTCCCCCTCCTCCTCTTCTTTCTCATTTCCACTCTCTCATGACCAACCATCACTTCAAACACTCCGTTCTCTCAGTTTTTCTC


Gene Sequence:
>Vu_22053(-)
ATGCCATCACCATCTTCATCTTCCTCTGCATATTCCCTTTACAATTCTTACATGGTTTCCAACTTCATGGTCTCTATCATAGTCCCCTTATTCCTCTTCTCCTTGTTTCTTGTTCATGTTTCCTCTTGTAGTCAGATTGATAAACTCTCCCTCTTGGCTTTCTCTGGGAACATATCCACCTCTCCACCTTTTCCTTCTCTCAATTGGTCTGATTCTCTTGACTGCTGTGCTTGGGAAGGCATTACTTGTGATGGGGATCTTAGAGTCACACATCTTTTGCTACCTTCTAGAGGCCTCACTGGCTTCATCTCCCCCTCTCTCACAAACCTCTCTTCTCTCTCTCACCTTAATCTCTCCTATAACAGATTATCTGGTGGTCTCCAGCACCAGCTTTTTTCATTGCTCAGTGACTTGGTGGTTCTTGATTTGAGCTACAATCATCTGTCTGGTGAACTGCCACCTTTTGTCGGTGATAACAGTGGCAAAAATAGCAGTGGTGCTGCTATCCAGGAGCTGGATTTGTCCAGCTACTTTTTCAACGTAATCGCCTTAAAGTGA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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