Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21899 LG5 38034481 38037460 PREDICTED: probable receptor-like protein kinase At2g42960
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 38034565 synonymous_variant p.Glu482Glu
C/T 38034718 intron_variant
G/T 38034778 intron_variant
G/T 38035179 missense_variant p.Thr424Lys
C/G 38035346 intron_variant
T/G 38035352 intron_variant
G/A 38035565 intron_variant
A/G 38035858 intron_variant
T/C 38036115 intron_variant
A/T 38036171 intron_variant
C/T 38036237 intron_variant
T/G 38036246 intron_variant
A/G 38036264 splice_region_variant&intron_variant
G/T 38036278 missense_variant p.Pro296Thr
G/A 38036281 stop_gained p.Gln295*
A/G 38036286 missense_variant p.Leu293Pro
G/T 38036287 missense_variant p.Leu293Met
A/G 38036361 missense_variant p.Ile268Thr
T/C 38036379 missense_variant p.Asn262Ser
C/T 38036395 splice_acceptor_variant&intron_variant
A/C 38036400 splice_region_variant&intron_variant
G/A 38036409 intron_variant
A/C 38036427 intron_variant
A/G 38036431 intron_variant
G/A 38036432 intron_variant
C/T 38036452 intron_variant
A/T 38036482 intron_variant
T/C 38036487 intron_variant
T/A 38036503 intron_variant
G/A 38036521 intron_variant
G/A 38036531 intron_variant
T/G 38036539 intron_variant
A/T 38036550 intron_variant
C/T 38036593 stop_retained_variant p.Ter252Ter
C/T 38036596 synonymous_variant p.Ala251Ala
G/A 38036597 missense_variant p.Ala251Val
G/T 38036620 synonymous_variant p.Ile243Ile
T/G 38036626 synonymous_variant p.Ile241Ile
C/T 38036657 stop_gained p.Trp231*
G/A 38036676 stop_gained p.Gln225*
G/T 38036734 intron_variant
G/A 38036750 intron_variant
G/A 38036753 intron_variant
A/G 38037366 missense_variant p.Val32Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21899.1
MSANNSLHVELSKKTSFLGLKLWVLIGIGVGVFIVLILCALSVWVMFRRKSRRSLDKFSLSQIPHVSKDIRVDKVGVQTSYDQAESVAIPVHDKASENNSDKFLVHLRKSKSSDADNISQCSSVYHHERGFSSMSGEEGSSGTVKKQSALAFGGVITASPLVGLPEISHLGWGHWFTLRDLELATSRFSPENVIGEGGYGVVYRGRLINGSEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGAMSQQGILTWEARMKVITGTAKALAYLHEAIEPKVVHRDIKSSNILIDTEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNERSDIYSFGVLLLEAVTGRDPVDYSRPANEVNLVEWLKMMVGMRRAEEVVDSRLEVTPSTRALKRSLLVALKCVDPEAEKRPKMSQVVRMLEADEYPFREDRRNRKSRTASMEIESLKDISGPSDAEKVKGSEGHAPETTQA*


CDS Sequence:
>Vu_21899.1
ATGTCAGCAAACAATTCTTTGCACGTGGAATTATCGAAGAAGACTTCGTTTCTTGGATTGAAATTATGGGTTTTGATTGGGATTGGTGTTGGTGTTTTTATAGTTCTGATTCTTTGTGCATTATCTGTATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGACAAGTTCTCTTTGTCACAAATACCGCATGTCTCAAAAGACATCAGAGTTGACAAGGTTGGGGTGCAGACTTCTTATGATCAAGCAGAAAGTGTAGCTATTCCTGTTCATGACAAAGCAAGTGAGAACAATTCTGACAAGTTCTTAGTTCATTTGCGCAAAAGCAAATCCAGCGATGCTGATAATATCAGTCAGTGCAGCTCAGTTTATCATCACGAGAGAGGATTTAGTTCAATGTCAGGGGAAGAAGGAAGCTCCGGCACTGTTAAGAAGCAGTCTGCATTGGCATTTGGAGGAGTGATAACTGCCTCTCCTCTAGTTGGCTTGCCAGAAATTTCTCATCTTGGGTGGGGTCACTGGTTCACACTAAGAGATCTGGAACTTGCAACTAGTCGCTTCTCTCCAGAAAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAAGATTGATCAATGGATCCGAGGTGGCAGTTAAGAAAATTCTTAACAACTTGGGACAAGCAGAGAAAGAGTTCAGGGTGGAAGTGGAAGCTATTGGCCATGTGAGACATAAAAATCTTGTGCGCTTACTTGGTTATTGCGTAGAAGGAGTTCACAGGTTACTGGTGTATGAATATGTGAACAATGGTAATTTAGAACAATGGCTACATGGGGCTATGAGCCAACAAGGGATACTTACCTGGGAAGCGCGGATGAAAGTTATAACTGGCACAGCCAAAGCACTGGCTTATTTACATGAAGCAATAGAACCGAAAGTCGTTCACCGGGATATCAAGTCTAGCAACATATTGATTGATACCGAGTTCAATGCAAAAGTTTCTGACTTTGGCTTGGCCAAACTTTTGGACTCAGGAGAAAGTCACATTACTACTAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATATGCCAATACGGGTTTGTTAAATGAGAGGAGTGACATTTACAGCTTTGGTGTTCTCCTGCTAGAAGCAGTTACTGGAAGGGATCCTGTGGACTATTCACGTCCTGCTAATGAGGTGAATCTTGTTGAATGGCTCAAGATGATGGTGGGGATGAGAAGGGCCGAGGAAGTTGTGGATTCAAGGCTTGAAGTGACACCATCAACACGTGCTTTAAAGCGTTCTCTTCTGGTTGCACTTAAGTGTGTTGATCCTGAAGCAGAAAAGAGGCCTAAAATGAGTCAGGTTGTGAGAATGCTTGAAGCCGATGAATATCCATTCCGAGAGGATCGAAGAAATAGAAAGAGCCGCACAGCCAGCATGGAAATTGAGTCTCTGAAGGATATTTCTGGCCCATCTGATGCTGAAAAGGTGAAGGGTTCTGAAGGCCATGCACCAGAAACAACTCAAGCGTAG


Promoter Sequence:
>Vu_21899::LG5:38037460-38039460(-)
AACCAAAACAAAAGGTCAGAATATAAATGTTAATGCCAGCTACACTTTCAAAAAATGTCAAAATTTTCTGTGACCCTTCACCATAATGTGTCCAAAATCCAAATTCCACAGTCAATTGCATCAGCATTATTGTGCAGGGACAGATATGCCATGATACAATGCTTTTCAGGTACTAAAATATTTATCATGTATTCTGTTTCCACCATTCATATTTGTTGTTCATAATTTCTTAACTGTTTATTTCTTCTTCCTATCTTCCATCTTTTTAGCCGATAAAGTAAACATTTATCAGTATTGTTTAAAATAACACCAAGAGATTCATCAAATATAGTTTCCATTATAGTAAAGTGTAAGCTATAAGTTTATTCATTTCTTTATATAAGATGAAATATAGCTATAAAAAATAGTCTTTAAATCTTACTTTAGACACCAATATGCTATGAAACAACCCACTTATTCTTTCACACGTGTTTAAAAAGATGTTACATTCTTAAAATAAGTTTAATACCTCAAAAGTTCATCTTTTAAATTTTAGTAATATATATGGTGTGATGGAAAATAAAGAAAAAAGTATTGAAGGAGTGCTTGCAAAAAATGAGAAATCTGAAGATCAAACTCTAAAGTTTCCATCACCAAAAAATTAAAACGCTTTTAAGATTTGGAATGTAAGCATTTTATTAAATATTTATTTTTCTGTTCATACAAATAGGACAGTTTGGTGAGTATACCTCAGAAGAAGCTAGATTTGGTTTGGAGTTCAACCCTGTTGGATTGAGGTTGACTCTCTCTCTCTCTCTCATCAACCCACTTCTTATTTCTCTCTCCTCTTTTTCTCTCTTTACTCTACTTTTGTTGTTAGCTTATTTAATACACTTTTTGCTTCCAGCTATAAATGCTTCACCTGTTTATTACATTTTTGCTTTCCCTTTACTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTTTCCTCCATTACAAACCAGGTTTCCTTTCCAGCTAGTTAGGTCCCGCTCTCATCCTGAAGCACAGTGCCCACCAACCGTTTTCCCCACCACCATTGCTTTTTCCTACACCAAAATCTAGCCATTTTCACTCTTTCTCTCTCTCCTGGCATTTTTTTTTTCTTCATAAAAATAGTACGTTTGTCTGGCATTCCTATGAATTTTTGTTTATTTATTTCCTGTTATCTTGGTCTTGCCTTGGGTTTAGTTGTGACCCACTTGAGGTCACAATCCACTATAGCTAACTGCATATCAGACTCTGCATCTTTTTGCAGCATCTGGGTTTTGCAGGGCTTGTTGTGCTTTTTTCTTCTATTGTTCTGCCATTGCTGCGTCTATCTATGCTCATTGGGTCTGTTTGGGTTCAGAGAGAAGGCCCTTTGTTGCCCCTGTGGGTGCTGGAGATAGAGGATCAAGGAGGGTGATATAGATCAATACAAAGGTGAGTGTTTTGCGTCTTTTAGAGCCACTTTTTTGTTTTTGTATATTTTTGGGAAAAAATGGCATTTGGGTTTGCCTTTTGTTATTATTAGTGATGCTTTACAAGTTTGCTTTTTTAGTCTTGTTGGATATTTTGTTGTGATTAGAATTGCTTGAGACAGTGGAGGGCTTCTTATTTTCCTTATAAATTGTAAATTTATTATCGCTTTTCTGATCGGAGTGATGTGATCGCAAATGGGTTTCTGATTTGTTGAAGTGTTGCAATAGTTTTTGGTTCAGAATACCTGAATTCCCGCAAATTGGTTTAAATGCTGCAGCCAGATTTTGTTTGATTTTGATAAAAATGGTGGAATTGGTGATTAGATGAGTTTCTGATTTTGTTTTTTGTTTGGTTTATGAGGATTTACTGCATGAACTTGAACATTGGCTGTAAATTGGAATGTTGAATTCTTAACCATGTTCTTGCATTCAGGTGGGAATGTCTTGATTGTACGCTGAAAAGTTTGGTGGACATATTTGATTGACTCATTTTTGGATCCAAGC


Gene Sequence:
>Vu_21899(-)
ATGTCAGCAAACAATTCTTTGCACGTGGAATTATCGAAGAAGACTTCGTTTCTTGGATTGAAATTATGGGTTTTGATTGGGATTGGTGTTGGTGTTTTTATAGTTCTGATTCTTTGTGCATTATCTGTATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGACAAGTTCTCTTTGTCACAAATACCGCATGTCTCAAAAGACATCAGAGTTGACAAGGTTGGGGTGCAGACTTCTTATGATCAAGCAGAAAGTGTAGCTATTCCTGTTCATGACAAAGCAAGTGAGAACAATTCTGACAAGTTCTTAGTTCATTTGCGCAAAAGCAAATCCAGCGATGCTGATAATATCAGTCAGTGCAGCTCAGTTTATCATCACGAGAGAGGATTTAGTTCAATGTCAGGGGAAGAAGGAAGCTCCGGCACTGTTAAGAAGCAGTCTGCATTGGCATTTGGAGGAGTGATAACTGCCTCTCCTCTAGTTGGCTTGCCAGAAATTTCTCATCTTGGGTGGGGTCACTGGTTCACACTAAGAGATCTGGAACTTGCAACTAGTCGCTTCTCTCCAGAAAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAAGATTGATCAATGGATCCGAGGTGGCAGTTAAGAAAATTCTTAACAACTTGTAAGAACACTTGATGGTTTATCCTGTGACTGTCATCTATTGCTGCTATTTCTTGATTGAGCAATGATCTTTGAACTTGCTCCATAATTGCATAATGTGTTGAATTCACAGGGGACAAGCAGAGAAAGAGTTCAGGGTGGAAGTGGAAGCTATTGGCCATGTGAGACATAAAAATCTTGTGCGCTTACTTGGTTATTGCGTAGAAGGAGTTCACAGGTAAACTTGGTGTTCTTAATGTATCAAAATATCACAAATGAAAATATTCCCTTATATACTGGATCACATTACTAACATTATTTTTTGTGATGACCTTTGTCTTACTTTTTTGTTGAAAATTTGAACTGAAGCAAGCTCTTTTGATTGCTTTTTCTTAATAAGTGTGGTTGCCATCTGATTTGCAGGTTACTGGTGTATGAATATGTGAACAATGGTAATTTAGAACAATGGCTACATGGGGCTATGAGCCAACAAGGGATACTTACCTGGGAAGCGCGGATGAAAGTTATAACTGGCACAGCCAAAGCGTAAGTTTTATTTGAAAACTTCAAAAAGAGGACAGTATGAATTATTTCTGTCGACTTATGAAAAATTGCAGTGAAAGCATTTTGTGATAACTATTTTAAATTTCATATTTAGGGTGATCTCTAAATGGTTGACCATGTTAAACTTGTCACACTGTTAGTGTATCAAAATTAAACAATCAGTTTTTAATGTGTACCAAAGAATGTCATCAATGTAATTTGAGAGTAAAGGGTGATATTGCTACTTTGTAGGATATATAGTCATGTCTTTTGCAATTTATTTGCTCCACTAGGATTCTGGACAACACAGCTATGTGTTGTCTGCTAATCTGCTCCACTGGTCCATTGTTAAATCCCTAAACATAGGGCACAAGGGACTTGTTGCCTAGATTATTATCTTTTCCATAGTTTTATGTTGGTGCTTGCTCCATTGGATACTTAACTTAATATTATAGCAATTTCAACATTAGGCTTAGTTCCACTGATTAAGCTCCCTGTTTCCTGTTACTGGTGCAGACTGGCTTATTTACATGAAGCAATAGAACCGAAAGTCGTTCACCGGGATATCAAGTCTAGCAACATATTGATTGATACCGAGTTCAATGCAAAAGTTTCTGACTTTGGCTTGGCCAAACTTTTGGACTCAGGAGAAAGTCACATTACTACTAGAGTAATGGGAACGTTTGGGTATGTAAAATGTTTTGGTATCCACTTTACAAATACTTTTAAAGGATTGCATGAATGGAAACTTACTCCTGTTTCCAATTTCAGTTATGTGGCACCAGAATATGCCAATACGGGTTTGTTAAATGAGAGGAGTGACATTTACAGCTTTGGTGTTCTCCTGCTAGAAGCAGTTACTGGAAGGGATCCTGTGGACTATTCACGTCCTGCTAATGAGGTATGAATTACTTAAGCAGTGACTAATGTACTGCTTCTAACTTTCTTTTGCATGAGAAGTGATCTCTGTTTTGCTTTTTGTATAGCTGATAATATTTTGATTATCCTCATTACAGGTGAATCTTGTTGAATGGCTCAAGATGATGGTGGGGATGAGAAGGGCCGAGGAAGTTGTGGATTCAAGGCTTGAAGTGACACCATCAACACGTGCTTTAAAGCGTTCTCTTCTGGTTGCACTTAAGTGTGTTGATCCTGAAGCAGAAAAGAGGCCTAAAATGAGTCAGGTTGTGAGAATGCTTGAAGCCGATGAATATCCATTCCGAGAGGTTCATTCTTTGTCTTATCTTCTCATATTTAACTTTTGCTACAGAATCTGAATTTTTATCACAATTTGGGACTTTGGATGTTTGTTTCGCTCCTTGCTACCTGACACATCATTGCGAGTACATACTAACTCAATAGCCTTTTTGTAATCCTAGTGTGTTAAGCTTCTTTTCTGTGTGGAATTATTTTTTGAACTTGATATTTTTGAATGACTAGTAAACAATAACATGTTCCCAAATTTATTCTCAGAATTCATCTGCCCGTATGCATGCCCCTTTCATGATTAGTTACCAGTTACTAAATGTTGAATGCCATGGATCCTGTGGTTTTGTGTGTGCATGTTTGAATGTATGCGTTTCTGGATATTACATGAACTCTTCATCAGTCACTTCTATTGGATTTGTTAATTTAAGCCAAACATATATTCTATATCACTTCCAGGATCGAAGAAATAGAAAGAGCCGCACAGCCAGCATGGAAATTGAGTCTCTGAAGGATATTTCTGGCCCATCTGATGCTGAAAAGGTGAAGGGTTCTGAAGGCCATGCACCAGAAACAACTCAAGCGTAG