Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21836 LG5 36684963 36686512 disease resistance RPP13-like protein 4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 36685163 stop_retained_variant p.Ter416Ter
G/C 36685672 missense_variant p.Leu281Val
A/T 36685674 missense_variant p.Val280Glu
A/C 36685700 missense_variant p.Ser271Arg
G/C 36685749 missense_variant p.Thr255Arg
C/T 36685991 missense_variant p.Met174Ile
C/T 36686008 missense_variant p.Glu169Lys
T/A 36686030 missense_variant p.Leu161Phe
C/T 36686034 missense_variant p.Gly160Asp
A/G 36686097 missense_variant p.Leu139Ser
A/G 36686124 missense_variant p.Ile130Thr
C/T 36686130 missense_variant p.Gly128Asp
T/C 36686167 missense_variant p.Lys116Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21836.1
MSIRTNPMKAVPTLLKRLVTVDKQAKLKDLKSELTNIKDLFSKVKKNEQDLLDKLTKVDGYLRNNNIPKLMEDEEMICKEIKESTKKLLPADQFPQPEKANKEATASPPSTQQPEKLEVIKKNYESLGDIEMKCLKSLLHFPENSVMKRRNIILWWVGVGLVEMEAAKENGEYMFGKLMDHKLILPDKYDFVNKLFKVNPLVYRVHESRKKANEGKKPFQIVTSSHQSDSPACLALNKLKVELSDAFGSKSNHFTSIFNTGASYLIFGSQSMAKMKQLQVLQLGRWLHASPKHHIEVNSEEFLKELRDQESLKYLSLRGISRISQLPDSIFQLKNLETLDLKACHNLETLPVLKGFVIGSSGKTRDLANLSKLKQLSIHVGSGAIVGDIEFPSERLSELEKLKISWGVFATRYSEIELKLPQKLKKLHLEGFPGQHIPEWLKPDKITTSLCELYITGGKLQSMDLQGYAHVSCSLQTIRSST*


CDS Sequence:
>Vu_21836.1
ATGTCTATTCGGACAAATCCCATGAAAGCAGTGCCTACATTGTTGAAACGTTTGGTGACTGTAGACAAACAAGCAAAATTGAAGGATTTGAAAAGTGAGTTGACCAACATAAAGGATTTGTTTTCCAAGGTGAAGAAAAATGAACAAGATCTACTTGACAAGTTAACAAAGGTGGATGGCTATCTTCGCAACAACAACATACCTAAGTTGATGGAAGACGAGGAAATGATTTGCAAGGAAATAAAGGAATCAACTAAAAAGTTGCTGCCTGCTGATCAATTCCCACAACCTGAAAAAGCAAATAAAGAAGCTACTGCATCACCCCCTTCAACCCAACAACCTGAGAAGTTGGAAGTGATTAAGAAAAATTATGAGAGCCTTGGTGATATTGAAATGAAATGCTTGAAGTCTCTCTTACATTTCCCAGAGAATTCTGTCATGAAGAGAAGGAATATAATCCTTTGGTGGGTTGGAGTGGGTTTAGTTGAAATGGAAGCAGCAAAGGAAAATGGTGAGTATATGTTTGGAAAGCTTATGGATCATAAATTAATTTTACCAGATAAGTATGACTTTGTGAATAAATTATTTAAAGTTAATCCTTTGGTTTATCGTGTTCATGAATCAAGGAAGAAAGCAAATGAAGGAAAAAAGCCTTTTCAAATAGTTACCTCATCTCATCAGAGTGATTCTCCTGCATGTTTAGCACTTAACAAACTGAAAGTTGAACTTAGTGATGCGTTTGGTTCTAAATCTAACCATTTCACAAGTATTTTTAATACTGGTGCAAGTTATCTTATATTTGGATCCCAAAGTATGGCCAAAATGAAGCAGTTGCAGGTGCTTCAACTTGGTCGTTGGCTGCACGCTTCACCAAAACATCATATTGAAGTGAACAGCGAAGAATTCTTAAAGGAGTTAAGGGATCAAGAGAGTTTGAAATATCTTAGCCTTCGTGGAATATCTAGAATATCTCAGCTGCCAGACTCCATTTTTCAACTTAAGAACCTAGAGACTCTCGACCTCAAGGCCTGTCACAACCTAGAAACATTACCAGTACTAAAGGGATTTGTGATTGGTAGTTCTGGCAAGACTCGAGATCTTGCAAATTTGTCAAAACTAAAGCAACTCAGCATACATGTAGGAAGTGGGGCTATTGTTGGAGATATAGAGTTTCCATCGGAAAGATTGTCAGAGCTTGAGAAACTAAAAATATCATGGGGTGTGTTTGCCACAAGGTACTCTGAGATTGAGCTTAAGCTGCCTCAAAAGTTGAAAAAGTTGCATCTTGAAGGCTTTCCTGGACAACATATTCCAGAATGGTTGAAACCTGACAAGATAACCACAAGTTTGTGTGAGCTATATATTACAGGAGGAAAACTCCAAAGTATGGATCTTCAAGGATATGCTCATGTGTCTTGCTCATTGCAGACCATACGCTCAAGTACTTAA


Promoter Sequence:
>Vu_21836::LG5:36686512-36688512(-)
CACTCTGATTTTTTGTTTATTGATTTATTACAAAATAAACTTAATTAATAGCAGTTAAGGTGCATGATTAGTATAATGTACAGAAGTTGCAAACTATGGGCTAGATTCACCCTCTAACTCCAGAGGAATGAAAAAGCGATATCAATCTTGCTGATAAAGACAAATTGCAGCAAACTTACTCATGAAAAACAGTCACTTAAAAATAACCTGTTATTCAATTTTTCATTTCATATTGAAACTCTAAATGTCAAACTAAACAGCACTCAATATACGCAGAAAGTAATTATATTTGTGTATTGCATTTTCTCCTGTATCGAGTCTATATTGGTACTTGACATGTACTGGCTGATCTGATCAAGCTACTAGTCTTTTGAACCAGAATGACATGCCTTCTATCAATCCCAAGATGTTTTACAGTCAAAAGCCCAGCCAAGTGATTTGAAAAATATCTTCTCACTTCTTATTGAAGCTTCATCAATCTCTACCCTTTTATATTTCTATTTAGTTAATGCAAAATGGAGAAGTACTTAAACTTTGTCTGAAGTATAGGAGAGATCAGATGTCAATCTTTACTTAGTTGTAAGAATGTAATGAGATAATCACATATGCTTGCCATTATACACTGACTTTTAATCTAATGATAGCATTTAGGTATGAATGAGAGTTGGCAGCACATGCAGTTTTTATGCTTCAAGGAAGTGTTTGGTTTGCTAAAATATGTTATATTTTCATTTGTGACAATAATTTTCTTACTAAATTGCTAAGATAAGAAAATTATGTTTTGCTTTTACTTCTTGTTCTCAGTTTTAATTTCTTGACTAGCTCCCTATCTTCACCACCTGTTTCTCTACCACTTCTTTATTGTGGATTCTCAGTCCTGAATTGTCTAAGATCTTAAAGACTTATGGGGTTATTGTTATAGAAGAATAAAAAGTGAAACTACTGTAATAATCAAACAAAAATCTTTTGAATAGATATAACGAAATTGAGATGATGATTTATTACATTTTTGTGATACTAGTTTGCAACTATCAAAATTTTCAGAACGGAGCAGCATCAGTATTAAACGTCACTTCATTTTCTTATGCAGTTTGGACGCTTAATTTCTTAGTTGGAGTGATATTAAATAGACACATATCCAACAACAGAAACACCAGTTAACTCTGGACATTTATTCTAACATTTAAAGTACTCTGTTTCAATCCCACATCGACAATACTAGAAATAGTAAATGGAATAATAGGATACAAATATAACATGTTTCACTCTGAAAAACATACTTACCTGGACAGGGTCGATGGACGATCAAGAAGATCCATGACCTAGAAAAGTGACATTCATTGCACTTCGAATGGGTGCTTTTCTAAGGTCTGTCCTAGTGACAGAGCCTATGTCATAATTTGTTGCAGTGGGGGCCTGCGTTCGCGCGGCCCCTTTTAAGTCTATCTTTTAAAGTTTTTTGTATGTAATTACTGAAATGAACTTCTATTAATGTGAAGAATGTCCTGGTAATTTCAAGGTGTCTTTCAATTATTCTAGAATGTTACTTGGGTTCAGGGTAAGTTAAGAATCAAGGAATGTCTGTGGCAGCTGTTCCTGAACAGAGAAATGAAACATTTTTGGGGATTCTTTTCTTTGCTTCTTTTTGTCTATTGGAATATCTTGATGACAAAGTTCAGCTCGGTAAAAATATATTTCTCTCCAATCTTAAGTCCCATTCCACCTATCTCCAATCTCGAGCAAAAGTATTGCTTTTTTTATCAGGTTTTTATGAGATCATAGACTTGAGATTGTTTCTTTTATCAGGTTTTTATGAGATCATAGACTTGATACCTCAATCTTGTTGCAAAACTTTATTGCTTCGTTAACTGATCTTTCATAGTCTCAAAACATCACACCACTCTGTCCCTCCATCTTATAGGAAAAAATATAGTTTCTTTCGTCAGAGATTTTTCTATAAAGTCACAAGTCTGTTCTTCAGTCTCATAGCAGAAAAAGAA


Gene Sequence:
>Vu_21836(-)
ATGTCTATTCGGACAAATCCCATGAAAGCAGTGCCTACATTGTTGAAACGTTTGGTGACTGTAGACAAACAAGCAAAATTGAAGGATTTGAAAAGTGAGTTGACCAACATAAAGGATTTGTTTTCCAAGGTGAAGAAAAATGAACAAGATCTACTTGACAAGTTAACAAAGGTGGATGGCTATCTTCGCAACAACAACATACCTAAGTTGATGGAAGACGAGGAAATGATTTGCAAGGAAATAAAGGAATCAACTAAAAAGTTGCTGCCTGCTGATCAATTCCCACAACCTGAAAAAGCAAATAAAGAAGCTACTGCATCACCCCCTTCAACCCAACAACCTGAGAAGTTGGAAGTGATTAAGAAAAATTATGAGAGCCTTGGTGATATTGAAATGAAATGCTTGAAGTCTCTCTTACATTTCCCAGAGAATTCTGTCATGAAGAGAAGGAATATAATCCTTTGGTGGGTTGGAGTGGGTTTAGTTGAAATGGAAGCAGCAAAGGAAAATGGTGAGTATATGTTTGGAAAGCTTATGGATCATAAATTAATTTTACCAGATAAGTATGACTTTGTGAATAAATTATTTAAAGTTAATCCTTTGGTTTATCGTGTTCATGAATCAAGGAAGAAAGCAAATGAAGGAAAAAAGCCTTTTCAAATAGTTACCTCATCTCATCAGAGTGATTCTCCTGCATGTTTAGCACTTAACAAACTGAAAGTTGAACTTAGTGATGCGTTTGGTTCTAAATCTAACCATTTCACAAGTATTTTTAATACTGGTGCAAGTTATCTTATATTTGGATCCCAAAGTATGGCCAAAATGAAGCAGTTGCAGGTGCTTCAACTTGGTCGTTGGCTGCACGCTTCACCAAAACATCATATTGAAGTGAACAGCGAAGAATTCTTAAAGGAGTTAAGGGATCAAGAGAGTTTGAAATATCTTAGCCTTCGTGGAATATCTAGAATATCTCAGCTGCCAGACTCCATTTTTCAACTTAAGAACCTAGAGACTCTCGACCTCAAGGCCTGTCACAACCTAGAAACATTACCAGGTGATATTGCATTATTGAAAAACCTCAAACATTGAATCTGTCTCAATGCTACTTGTTGGATAGAATGCCAAAGGGGATTGACAAGCTGAATAAGCTTGAAGTACTAAAGGGATTTGTGATTGGTAGTTCTGGCAAGACTCGAGATCTTGCAAATTTGTCAAAACTAAAGCAACTCAGCATACATGTAGGAAGTGGGGCTATTGTTGGAGATATAGAGTTTCCATCGGAAAGATTGTCAGAGCTTGAGAAACTAAAAATATCATGGGGTGTGTTTGCCACAAGGTACTCTGAGATTGAGCTTAAGCTGCCTCAAAAGTTGAAAAAGTTGCATCTTGAAGGCTTTCCTGGACAACATATTCCAGAATGGTTGAAACCTGACAAGATAACCACAAGTTTGTGTGAGCTATATATTACAGGAGGAAAACTCCAAAGTATGGATCTTCAAGGATATGCTCATGTGTCTTGCTCATTGCAGACCATACGCTCAAGTACTTAA