Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21722 LG5 35757456 35761134 PREDICTED: two-component response regulator ARR11-like isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 35757521 synonymous_variant p.Val22Val
G/A 35757837 downstream_gene_variant
T/A 35757882 downstream_gene_variant
C/T 35757885 downstream_gene_variant
G/A 35758054 downstream_gene_variant
C/G 35758059 downstream_gene_variant
G/T 35758064 downstream_gene_variant
G/A 35758085 downstream_gene_variant
T/A 35758276 downstream_gene_variant
C/A 35758414 downstream_gene_variant
T/A 35758481 downstream_gene_variant
T/C 35758651 downstream_gene_variant
G/A 35758740 downstream_gene_variant
T/A 35758743 downstream_gene_variant
A/G 35758775 downstream_gene_variant
C/T 35758819 downstream_gene_variant
A/G 35758871 missense_variant p.Ser48Gly
T/C 35758890 missense_variant p.Leu54Pro
A/G 35759026 downstream_gene_variant
G/A 35759136 missense_variant p.Gly97Arg
G/T 35759340 stop_gained p.Glu165*
T/C 35759770 missense_variant p.Cys242Arg
C/T 35759806 downstream_gene_variant
T/C 35759811 downstream_gene_variant
G/T 35759835 downstream_gene_variant
T/C 35759904 downstream_gene_variant
G/A 35759979 downstream_gene_variant
C/A 35760046 downstream_gene_variant
C/T 35760051 downstream_gene_variant
A/G 35760067 downstream_gene_variant
T/C 35760075 downstream_gene_variant
C/A 35760366 synonymous_variant p.Gly322Gly
A/T 35760390 synonymous_variant p.Ala330Ala
C/T 35760422 missense_variant p.Thr341Ile
A/T 35760581 missense_variant p.His394Leu
T/C 35760815 missense_variant p.Val472Ala
C/A 35760851 missense_variant p.Thr484Lys
G/A 35760875 missense_variant p.Gly492Glu
T/G 35760949 missense_variant p.Ser517Ala
G/A 35761093 missense_variant p.Ala565Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21722.1
MDNGCFSSPRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAKEFESFESFESIHLMRNGSELSDEGNLFAVEDVTSTKKRKDADNKHDDKECMDPSSAKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLIRIQKENDRRSSSSGMKHSDFPSKDLGSFGFQNPVNKQQNDVSTDSYNYSDGSLHLPTVENKNHEGDKGSVSQFTIAKKGRPLTGNVTDSNMRESSRVGLNQPFAQSEGNHAVFDCSLPTQYSWTEVPHMQLKEEHKSLVHLEDSFNQMPLHGKQHHIQVDQSQSVASISSAPSITEEEVPACIEAKPLFSDFKNDQSSSVNSIGNAVDTFPIQPGSLVMNAQSLEPISTTNSGLKAHGYNNLSCISDVEIYQRNLLLGGEAASAPLDEDLHFQWLQGECYNMNFGLQNIGMSEYYDPGLIAEAPSHLYDSADYSVMDQGLFIA*


CDS Sequence:
>Vu_21722.1
ATGGATAATGGGTGTTTCTCTTCCCCTCGACGTGATTTCCCTGCTGGTCTGCGAGTTCTCGTTGTGGATGATGATCCTACGTGGCTCAAGATCCTTGAGAAGATGCTCAAGAAGTGCAATTATGAAGTGACTACATGTTGTTTAGCAAGGCATGCTCTAAACTTGCTTCGTGAAAGGAAGGATGGATATGATATAGTGATTAGCGATGTAAACATGCCTGACATGGATGGTTTTAAACTTCTTGAGCATGTTGGGCTTGAGATGGATCTTCCTGTGATTATGATGTCTGTGGATGGGGAAACAAGCAGGGTCATGAAAGGTGTTCAACATGGAGCATGTGATTATCTCCTTAAGCCTATAAGGATGAAAGAACTGCGAAATATATGGCAGCATGTCTTTAGAAAAAGGATACACGAGGCAAAAGAGTTTGAAAGCTTTGAGAGTTTTGAGAGCATTCACTTGATGAGAAATGGATCAGAGCTATCAGATGAGGGGAACTTGTTTGCTGTAGAAGATGTGACCTCAACAAAGAAAAGAAAAGATGCAGATAACAAACACGATGACAAAGAATGTATGGATCCATCATCTGCCAAGAAAGCTAGAGTAGTCTGGTCTGTAGATCTTCATCAGAAGTTTGTTAAAGCTGTGAATCAGATTGGATTTGATAAAGTTGGGCCCAAGAAAATATTGGATCTGATGAATGTTCCATGGCTGACTAGAGAGAATGTTGCCAGCCACTTGCAGAAATACCGGCTTTATTTGATTAGGATTCAGAAAGAAAACGATCGGAGATCTTCCTCGAGTGGTATGAAGCATTCAGATTTTCCTTCAAAAGATCTGGGAAGTTTTGGATTTCAAAACCCAGTAAACAAGCAACAAAATGATGTTTCAACTGACAGCTACAATTATTCGGATGGATCATTACATCTTCCTACCGTGGAAAATAAAAATCATGAAGGCGATAAGGGCAGTGTTTCACAGTTCACCATAGCAAAAAAAGGAAGGCCCTTGACTGGTAACGTCACCGACTCAAATATGAGAGAGAGTTCAAGGGTTGGCCTCAATCAACCTTTTGCCCAGTCAGAAGGAAACCATGCAGTGTTTGATTGCTCCTTGCCAACACAGTACTCATGGACTGAAGTTCCACACATGCAACTCAAAGAAGAACACAAGTCACTTGTTCATTTAGAAGATAGCTTCAATCAGATGCCATTACACGGTAAGCAGCATCACATCCAAGTTGATCAATCACAGTCAGTTGCTTCAATTAGTTCAGCTCCCTCTATAACGGAGGAAGAGGTTCCTGCTTGTATAGAAGCAAAACCTTTGTTTTCAGATTTCAAGAATGATCAATCCAGTTCTGTGAATTCAATAGGGAATGCAGTTGACACCTTTCCAATTCAACCAGGAAGTCTTGTTATGAATGCTCAATCTTTAGAACCCATTTCAACTACAAATTCAGGATTGAAAGCACATGGATATAATAACCTCAGTTGCATTTCTGATGTGGAAATTTACCAAAGAAACCTTCTTTTGGGAGGTGAGGCAGCTTCTGCACCTTTGGATGAGGATTTGCATTTCCAGTGGCTGCAGGGTGAATGTTATAACATGAACTTCGGTCTGCAGAATATAGGAATGTCAGAATATTATGATCCAGGGCTTATTGCAGAAGCTCCAAGTCACTTATATGATTCAGCCGATTACTCAGTTATGGATCAAGGTCTATTCATAGCATGA


Promoter Sequence:
>Vu_21722::LG5:35755456-35757456(+)
CTAAAACTAAGTTAACAAGATAAAAGATAGCTATTAAACCTATTTTCTATTATTTTAATTTTTGTATCACTTTGGAACTTGTGGATAGCATAAATACATTTGGGTAGTAGTGCACTCAAAGTTAATTAATATTAATATGAATGTTAATGTTAATTATTAGTAGAATTAGAATTGATGATTGATTGGAATTTGGAGATGGGAACTAAAATGAAATTGGGAATGCATAAGAATTGCTCTTTCCTCCAACAACTTTCCCATCATGTCTGTGAAATGCATTCCACGTGCCTTTCCACCAAAACTATGTCACTCATCACAAGAATTTTCACAATGTCCATCTTCCTTTCTTTTTCCATTTCCAGATCCCATCTTCAGTGAATTCTTAGCTGGTTTTCATTTTTCGTTTTTATATGTTATTTCAGTTTGTTATCTCTGTTTAATATGAAATAAATTTTCTTAACAAAATAACATTATTATGCGTGAAGAAAAAGAAGAAACATAAATTAAGAATGACGGGTGTACCATATAATCGTCTTATCAACGCATTCTTTTAATCACATAGCAGTTAACTCTTATAAAATAACAAAGATTTTTTCTAATTCTTTTACCATTTACACTTCTTCAATTGATCGGTCACATCGACCAATCGACAATTATACGTTAGAATCATGTTTAATAAGGTAAAATATATTTATAATTTTTTGGACCGTAAATGAATCAACCTTACATAAAAATTCGTTTTAAAATTTATACATACATAAATAAAGTAAAGAGGTAGATGATTGTATTTGTTACGAAATTAAAACTATGTTGTGATAACCGATCAGATTTTTTGACTGATTTAAGCATCAGAATATCTTTGACAAGTATACCGTTCTTTGGAACAGGAAAAAAAAAGACTAACGACTTTAAAAGATGGATAATGATATTTTGATAACATTTTTTTGACAACATTTTAACATCATCTACGTATCATTCTGTGATTGGTCCAAAATTATTCTACAATCAATGATAATAATCATAAAGACTAACATAGACCAATCACAGAATGACACGTAAATGATGTTAAAATATTGTCAAAAAATGTTGTTAAAGTATCATTATTCTTAAAAGATTAGTGATTAAAGTGTGAATGAGTAGTTTTTTACTATACTATCTAAAACAACCCGGAATTTTTTTTGAGAGATTAATCTTGATCACTGCTGCTATACACATATCAGTTGAGAAAGAAGTAAGTGACACTCCAAGCCAAAGACAAAACAACGTTTGAAAGAAAGTTGAGTTAAAACAAACAACAGTAATAATGAGAAGAGTTAATAGGTTCGAGAAACGCAGGTGGTGCAGATGCAGGTGCAGGGACAACAGAACAAAACAGAGAAGAGAGGTTGGAGAAGTATAGTATAAAGTATAAAGCAGAAACACTGTTTGTTTTCCCTAGGTTATGTTCTATCAGTGGTATAATAGTACACACCTTTTTGCATTTTCACAATCACAGCCCTCACACACTAACTTTCCCTAGGATGCCCCCAACACAACAATCCTCCCACCACAACCCAACCCAGTTCACTTTTTCAGTGTCACAAACATTTTTTCAATTTTCAATATCTAAATTTCTCAAAGCCACCCAACGTGTCCCTTATCTTTCGGCATTAATCTTAAAAAACTGCTTCCACTGTTCCTAGTTCCTTCCCACAATAATAATAATACTTACTGTGCATTGTTTAACAAGTAGCACTGAAGTTGCAGCTAGCTAGGTAGGACCAACCAACCAAACCCAAAGGGATATATACTAACGTACGCCACAGGGACCGTTAGCTGTGCGGCGCCAATATTCGTTGGTGCTCTCTCTCTCTTTCTCTCTTTTCCTCTGTCTTTCTTTCTTTCTTTCTTTCCTTTGATATTTTTTTAACTCTTCTTAACTTGTTATAACCCAACAACACAAACCCAACCTTTTTTGAACTCACAGCACACCCACTGATCCTACTCTTTGTCTCTCTCAAAAA


Gene Sequence:
>Vu_21722(+)
ATGGATAATGGGTGTTTCTCTTCCCCTCGACGTGATTTCCCTGCTGGTCTGCGAGTTCTCGTTGTGGATGATGATCCTACGTGGCTCAAGATCCTTGAGAAGATGCTCAAGAAGTGCAATTATGAAGGTTGGTTTTGTTTAGTCATGAGTGGTTCCTTTTTCTTTTTTGCACACTGCCACTTTTGTTATGTGCCAAGTTACCACTATTAGTTAATTTCATGTACTTAAGATCTATAAAATTGATGTAAAGTTTCCAGGTTTTGATTTATTTCTTTTTAAGCTTTAGCCTGTGGTGGGTTATGTCACGTTGTCATGGATCAGTTCGTAAGGAATGTGCTCGCTTTTTTATGGCCAAAAAAAAAATGAAACAGAATTTCTTCTGTTAAGCATGTAAACTGATGATGGCACTCAAATAGATAGTGTTGATTACTCATGATTTTGCATTCATTTTTTAAAATTTGGGTTGATTTTGGATTTTACTTGGTGAACTGATCTTTCAACTCTTTAAAGGATGGTCCTTTTCATTTTCCAAGAAGCAAAAACTTGAACTGCAGAAAAGTTAAGATTTTGAAGTTACTATTAGAGGGGGCATGTTGTAGATTACCTCGGATTCTATCTACTGTGTTACCGTGTCTGTTAATATTAAGACATTTAGAGAGGGGCATAAAGAAGTTCTCTTGTCGAATTTGATTCTTCCTAATCTAAATTTACTGTCTTCTGGCATTGTTTATTTATGGTATCTTAGGAGCTATGATATGCCATATTGGTAATCCGACAGTGTCTCATCCATTGATAACATGCACTAAAGTCAAAATATTAATGAGAAGATGGTTGGTGCACGAGCAGTACATCATGTTGGATTAGTTTTTTTAAAACTATATCTGGTAACTGAATTAAATCTGAATAAATTAAACTGTACATGTTCTGTGAGGTTTTTATACGTGAGATCTTAGTTTATCGCTAAAACTCTCTTGGATTGAGCATTTGTCCTTGGTAGGTTTTAAAAAATTGTTTTTCATAAATGGTAGGTAGAGAGTTTAGTGCTTATGAAGTAACATGAGGCAAATAAAAACACCAAGTAAAGCAAAACCCGAATTAGTGAGACTATGATTGCAACAAGAACAGATAATATATGAAGAGACATCTCTTAATGATAGTGTGAATGTCATAGGTAGTAGTAAGAGCTTATGTCTAATAGGTAATCTGAGAAATATTTGTATAACAAGAGACTTTGAAAGCTTTTTTGTTGTGTTACCATCTATACTGCCTACCAATCCCCTATCTGTGTTTCTCTTTCTTTTTCTTTTGCCTTTCTGTTCATATCAGTGAGATTTTATAGAAGTAACAAATTTTGAAAAGCAAACACATTATTCTGATTCTCTTCTTTCATTTGATTCAGTGACTACATGTTGTTTAGCAAGGCATGCTCTAAACTTGCTTCGTGAAAGGAAGGATGGATATGATATAGTGATTAGCGATGTAAACATGCCTGACATGGATGGTTTTAAACTTCTTGAGCATGTTGGGCTTGAGATGGATCTTCCTGTGATTAGTCAGTTCTCTATCAATAATATATTCAAGTTTTTCGTTATATGATATCATTGTAATCCTTTGATCACATTGATTGAAACTCCACGCTCTGACAAGTCACACTTTGCAATGCTGTTCAGTGATGTCTGTGGATGGGGAAACAAGCAGGGTCATGAAAGGTGTTCAACATGGAGCATGTGATTATCTCCTTAAGCCTATAAGGATGAAAGAACTGCGAAATATATGGCAGCATGTCTTTAGAAAAAGGATACACGAGGCAAAAGAGTTTGAAAGCTTTGAGAGTTTTGAGAGCATTCACTTGATGAGAAATGGATCAGAGCTATCAGATGAGGGGAACTTGTTTGCTGTAGAAGATGTGACCTCAACAAAGAAAAGAAAAGATGCAGATAACAAACACGATGACAAAGAATGTATGGATCCATCATCTGCCAAGAAAGCTAGAGTAGTCTGGTCTGTAGATCTTCATCAGAAGTTTGTTAAAGCTGTGAATCAGATTGGATTTGATAGTAAGTTTCTTCTCGAGGTTCTGTATAAAAGTGTTGCTTGTAATTGTCACTGTGGCTTCTATAAATCTTGCTGATATGCATAACCTAGCATATCCTTGATGAATTGAAGTGTGACTGCCAATTATAATCTTTTGTGCATGTAGTCATCTTATATCTTCCATAAAAAAATAATTTATAACAAATAATTTCTGTTTGGCAGAAGTTGGGCCCAAGAAAATATTGGATCTGATGAATGTTCCATGGCTGACTAGAGAGAATGTTGCCAGCCACTTGCAGGTGATGCTGTAATTTCACTCCTTCAATGTTACCCCTAGATTATTGAGAAAGAAACATGTATAGAGTCTTTCATTCAGATGAAAAATTTATTATGCATGATTACATTCATGTATTCTTTTTGGTAGACCTAGAATCATAACAAAACTTCACTTTGATACAATAGAGTGTAAGTAATTACCTCCAAACATAGGTCCTGTGCAAATGTTTCTTAGAAACATTACAACTTGGATGCAGATTATCTCGTAAATTCAATAGGACAAAACAAATAGTATAGAAAAAGTGTATGTTTGTGTAATGTTCCATGAGTTTGAAGTTTGAAACTCGGGTTCCTGATAAGAAATTTTCTTGTGCAGAAATACCGGCTTTATTTGATTAGGATTCAGAAAGAAAACGATCGGAGATCTTCCTCGAGTGGTATGAAGCATTCAGATTTTCCTTCAAAAGATCTGGGAAGTTTTGGATTTCAAAACCCAGTAAACAAGCAACAAAATGATGTTTCAACTGACAGCTACAATTATTCGGATGGATCATTACATCTTCCTACCGTGGAAAATAAAAATCATGAAGGCGATAAGGGCAGTGTTTCACAGTTCACCATAGCAAAAAAAGGAAGGCCCTTGACTGGTAACGTCACCGACTCAAATATGAGAGAGAGTTCAAGGGTTGGCCTCAATCAACCTTTTGCCCAGTCAGAAGGAAACCATGCAGTGTTTGATTGCTCCTTGCCAACACAGTACTCATGGACTGAAGTTCCACACATGCAACTCAAAGAAGAACACAAGTCACTTGTTCATTTAGAAGATAGCTTCAATCAGATGCCATTACACGGTAAGCAGCATCACATCCAAGTTGATCAATCACAGTCAGTTGCTTCAATTAGTTCAGCTCCCTCTATAACGGAGGAAGAGGTTCCTGCTTGTATAGAAGCAAAACCTTTGTTTTCAGATTTCAAGAATGATCAATCCAGTTCTGTGAATTCAATAGGGAATGCAGTTGACACCTTTCCAATTCAACCAGGAAGTCTTGTTATGAATGCTCAATCTTTAGAACCCATTTCAACTACAAATTCAGGATTGAAAGCACATGGATATAATAACCTCAGTTGCATTTCTGATGTGGAAATTTACCAAAGAAACCTTCTTTTGGGAGGTGAGGCAGCTTCTGCACCTTTGGATGAGGATTTGCATTTCCAGTGGCTGCAGGGTGAATGTTATAACATGAACTTCGGTCTGCAGAATATAGGAATGTCAGAATATTATGATCCAGGGCTTATTGCAGAAGCTCCAAGTCACTTATATGATTCAGCCGATTACTCAGTTATGGATCAAGGTCTATTCATAGCATGA