Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21720 LG5 35741637 35746587 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 35741658 synonymous_variant p.Ser891Ser
G/A 35741705 missense_variant p.Arg876Cys
G/A 35741741 synonymous_variant p.Leu864Leu
A/T 35741746 missense_variant p.Leu862His
G/A 35742087 upstream_gene_variant
C/T 35742120 upstream_gene_variant
C/G 35742128 upstream_gene_variant
A/C 35742209 upstream_gene_variant
G/A 35742254 upstream_gene_variant
T/C 35742294 upstream_gene_variant
A/G 35742501 synonymous_variant p.Phe769Phe
C/T 35742677 missense_variant p.Cys740Tyr
G/T 35742899 upstream_gene_variant
G/A 35743168 synonymous_variant p.Asn635Asn
A/T 35743414 upstream_gene_variant
T/C 35743456 upstream_gene_variant
A/T 35743763 missense_variant p.Trp543Arg
A/T 35743767 stop_gained&splice_region_variant p.Tyr541*
T/C 35743768 missense_variant&splice_region_variant p.Tyr541Cys
T/C 35744032 intron_variant
G/C 35744148 intron_variant
A/C 35744272 intron_variant
G/A 35744298 intron_variant
T/C 35744343 intron_variant
C/T 35744414 stop_gained p.Trp445*
G/A 35744491 intron_variant
T/A 35744495 intron_variant
A/T 35744503 intron_variant
T/C 35744508 intron_variant
A/T 35744515 intron_variant
T/C 35744815 intron_variant
G/A 35744922 intron_variant
C/T 35744975 intron_variant
C/T 35745066 intron_variant
T/A 35745313 upstream_gene_variant
G/A 35745370 missense_variant&splice_region_variant p.Thr348Ile
A/G 35745673 missense_variant p.Ile247Thr
G/A 35746186 synonymous_variant p.Gly134Gly
G/T 35746228 synonymous_variant p.Pro120Pro
C/T 35746513 synonymous_variant p.Gly25Gly
C/T 35746515 missense_variant p.Gly25Arg
C/G 35746585 start_lost p.Met1?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21720.1
MSIDCGGTSNYTDKGTGLSWISDSGMMKHGKSALVQNPRENKVQYQRRREFPIDSRKYCYTLGSEQRRRYLVRATFQYGILDDGDTYPQFQLYLDATKWATVSIYDATRTYVKEMIFRAPSNSIDVCVCCATTGSPFISTLELRPLNLSMYATDFESNFFLKVAARINFGAPSEDVVRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKKIEIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPGNARAYAYFAEIEDLAKNETRKFKLEQPYIADYSNAVVNIAENANGTYTLYEPSYMNVSLEFVLSFSFVKTRDSTQGPLLNAMEISKYVQIASKTDRQDSNFVNAFRFLSAGSALMNEGDPCVPTPWDWINCSTTTPPRITKINLSRRNLKGEIPRDLNNMESLTELWLDGNLLTGQLPDMSNLVNLKIVHLENNRLAGPLPSYLGSLPSLQALFIQNNSFSGVIPSGLLSGKIIFNFDDNPELHKGNKKHFQLMLGISIGVLGILLILFLASLVLLLNLRRKTSRQKRDEKGISGRSSTKPLTGYSFGRGGNLMDEGTACYITLSELKEATNNFSKKIGKGSFGSVYYGKMSDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHMLVYEYMHNGTLREYIHECSNQKQLDWLARLRIAEDAARGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWVRSLIRKGDVISIMDPSLVGNAKTESIWRVAEIAMQCVEQHGAYRPKMQEVILAIQDASSIEKGTENQLKLSSSSGSKPQSSRKTLLASFLEIESPDSCLPSAR*


CDS Sequence:
>Vu_21720.1
ATGAGTATTGACTGTGGAGGGACGAGTAACTACACTGATAAAGGAACGGGGCTTTCATGGATATCAGATTCTGGGATGATGAAACATGGGAAATCAGCGTTGGTACAAAATCCTAGAGAAAACAAGGTTCAGTATCAGAGACGCAGAGAGTTTCCAATTGACAGCAGAAAATACTGTTATACACTTGGTTCTGAGCAGAGAAGAAGGTATCTAGTGCGAGCAACGTTTCAGTATGGTATCTTGGATGATGGTGACACATACCCTCAGTTTCAGCTCTATTTGGATGCAACAAAATGGGCTACTGTGTCAATATATGATGCCACAAGAACTTATGTTAAGGAAATGATCTTCAGGGCACCCTCAAACTCCATTGATGTTTGCGTGTGCTGTGCTACCACCGGCTCTCCCTTCATATCTACCCTTGAACTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGAGCAATTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGTAGTCAGGTATCCAGATGACCCATATGATAGAATTTGGGAGTCTGATCTTATTAAAAGACAAAACTATCTGGTTGGGGTGGCCCCGGGCACTGAAAGAATTAATACAACAAAGAAAATAGAAATAGAGACAAGAGAATACCCACCTGTTAAAGTGATGCAGACTGCAGTTGTTGGCACAAAAGGAGTCCTTAGCTATAGACTAAACCTGGAAGATTTCCCTGGAAATGCTAGAGCTTATGCATATTTTGCAGAGATTGAAGATCTGGCTAAGAATGAGACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTACAGTAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGACCTACACTCTTTATGAACCAAGTTATATGAACGTGAGTCTTGAGTTTGTGCTTTCGTTCTCCTTTGTTAAGACCAGGGATTCTACTCAAGGACCTCTTCTAAATGCAATGGAAATAAGCAAATACGTGCAAATTGCTTCGAAAACTGACAGACAAGACTCAAATTTTGTTAATGCGTTTCGCTTCTTATCAGCTGGAAGTGCCCTGATGAATGAAGGTGATCCCTGTGTTCCAACTCCCTGGGACTGGATAAATTGTAGTACAACTACACCTCCAAGAATTACAAAGATAAATCTGTCACGAAGGAATCTGAAGGGTGAAATCCCGAGGGATCTCAACAACATGGAATCATTGACAGAACTGTGGTTAGACGGGAACTTGCTTACAGGACAACTTCCTGACATGAGCAATCTTGTCAATCTAAAGATTGTGCATCTGGAGAACAACAGATTGGCAGGTCCCTTACCATCTTACTTGGGTAGTTTACCAAGTTTACAAGCACTGTTCATACAGAATAACTCTTTTAGTGGGGTAATACCATCAGGTTTACTGTCAGGCAAAATCATTTTCAACTTTGATGATAATCCTGAACTGCATAAAGGGAACAAGAAGCATTTTCAGTTGATGCTAGGAATTTCTATTGGAGTACTAGGGATTCTATTAATATTATTCTTAGCAAGTTTGGTTCTATTGCTTAATCTGCGGAGAAAAACTTCTCGACAGAAACGAGATGAAAAGGGTATTTCTGGGCGCAGCAGTACTAAACCTTTAACTGGATACTCATTTGGTCGAGGTGGAAATTTAATGGATGAAGGTACTGCTTGCTATATTACACTCTCTGAGTTGAAAGAAGCTACTAATAATTTCTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGTGATGGAAAAGAGGTGGCAGTTAAGACTATGACCGATCCATCAAGCTATGGGAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATGCTGGTTTACGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCACGAATGTTCGAACCAGAAGCAATTGGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCTAGAGGTCTTGAATACTTACACACAGGATGCAATCCAAGTATCATTCACCGTGATGTGAAGACAAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTTTCAAGACTCGCTGAAGAAGATTTAACACACATATCAAGTGTTGCAAGGGGAACTGTAGGTTATCTGGATCCTGAGTACTACGCAAATCAGCAATTGACTGAAAAAAGTGACGTGTATAGTTTTGGAGTCGTTTTGTTGGAACTGATATCAGGAAAAAAACCTGTATCCTCAGAAGACTATGGTCCTGAAATGAACATCGTTCACTGGGTAAGATCCTTAATTCGTAAAGGAGATGTGATAAGCATTATGGACCCTTCCCTTGTGGGGAATGCCAAAACTGAATCAATTTGGAGGGTTGCTGAAATTGCTATGCAATGTGTAGAACAACACGGTGCCTACAGGCCAAAAATGCAAGAGGTCATTTTGGCCATACAAGATGCTTCTAGCATTGAAAAAGGCACAGAAAATCAACTCAAGCTATCATCTTCGAGCGGTTCAAAGCCACAGTCTTCTCGTAAGACTTTGCTTGCAAGTTTTCTAGAAATTGAGAGCCCTGATTCCTGCCTCCCCTCAGCCAGATAA


Promoter Sequence:
>Vu_21720::LG5:35746587-35748587(-)
TTTTATTCTAAGTTTCTTATTTTGGTCTTTCCTTATGAAGAAGTTTACCTATACATACACATCTCATTATTTAACATAAAAGAGGAAAGAAGATAAATGAGATGTATGAAAAGATTTATTTTGTTTTGGGATTCATGTTGATATTACTGTTCGTCGTATAAATACAAAATGAAAAAAAAGTACAAGTTAAACGAAAATTTATATTTTTTTTTGTTAATCTATGGACATTAACTTTATCCTAAAGATAAATAGATTAATAATCTTGGTTGTCTAGAAACTAAATATGGTGATGAATATTTTACTCAAACTATTTTATCTTTTCTTTTTCTTTTTTTCATTTCTCTTTCTGTGTTACAAATTCTACGTGGAAAAAGTATATAAATATAATAGTGTTCTGTACTTGTCTATTGTTAACAGCAGTGATAGTTTGAGGAAGAAGAAAAAAATATATCTATTTTGATATTCATAAATTTTTTATATTCATTTATATTATTTTTTATTTTTTTAAAAAAATATAAAAAAATTATTTTTTATGATTATTTTACTCTTGTGTTTCATATTAACGTAAAAATATATCATACCATTACTAAAAATCATTAAAATATTTTTTAAATGTTTTAGATGAGTTCACATGGAACAAGAGAAAAGTGAGTTGGTATAATAAACTTTACGAAAGGATCATTATTCTGATTTTATTCATCCCAGCAAAGATTGAAAGAAAGTGATTGTAATTTGTCCACTTACACAAATAGCATAAGCATCTGTTTCAATTGTTGACTTTATTTTTCCATAATGTGGTCTGAGCCTATGCAGAATTTGATACTACTTTCACAGGGGAAAACATGAACAAGCACATTTGCATTTCAAGGACACAACAGAATAATAATTGTGTGCATCTTGGACCACTCAATTTAATTGTCTGTAACATATATTATTTTAAGCTTCAAATTAAGGAACACAAATCAATAAATTAATCACCCTTCATTCTAATCCTGCACAATTTTCCACCTTTTGGCTTTTGGCACGGTTAAGGCTGTGTCCAACACAGCTTTTACATTAGAAAGAATTTACATTGTTATCAACTTGTGTCAATATATCATTAGAGAAGTTTCAATTTCAGTTCAAAAAATTTCTGATACTTAATAACAAAGAAAAGAGGTTGATCTTACCGTAGTGTGGTGGTGCATGCAGAATTGTTGATGCAACCTGTTTAGCAACCCCTCATTGTTTCTGTTCATTGTCTTATAGCCACAACACAAGACATTTTTTTCTTCTATACAATTAGTCCTGTTTGGTGTGTTGCTTCTTCCTCCAGTGAAAACAAATCAGTGGGCTCAGATATTAATTTTCACATTTCTTCTAGGGAAAGAGAAAAAGATAAGGGGAACATGAAGTCATTTTCTTAAAGAAAAAGAAGATTCCTATATCAGATAAAGATACAACAAACGTGAATGAACAATCAATAATAAAAAAAAAAAGATAAAGTTAAGTGGGAGAAAGCTGGTTGTGATGCTGAGTTCAAGCAACAAACAGTTCATTTTGTCCATCACCCAATTTTCTTGATGCAAATTATTAGCTTCTCTTCCTGAATACAATGTGTTTATGGTCTCTTTTTGTGATTACTCTTCTTCTTGTGCTGAGATCACATGTGCTTTGCCAACTTCAAGGTATGTTGTTTTTAGCAGGCAAGTCAAGGAGTTATTTCTGAATTCTATTTCACTTCAAGCAACCATGAATTACAAAAACTATAACTCATTTTCATGAACACGAAATTCCTGAATAGAGCGTGTTTATTCTGCAAAATATCATGTCATTTTGAAAAGAGGAACAATATTTTGATGCAATAATCCCTTAACTTTTAGTTCTGTTTTCTAGTCAGAACTGAAGTTCTATCTTTGGAATATGCGCTTTAAATGTTTGCATTAAGATCAACACCAAAAATTAGAAGAATTTTGTTGGGCTCTAAATTTGTGAGATAATTGATTTGGGGTGCAGAGTTT


Gene Sequence:
>Vu_21720(-)
ATGAGTATTGACTGTGGAGGGACGAGTAACTACACTGATAAAGGAACGGGGCTTTCATGGATATCAGATTCTGGGATGATGAAACATGGGAAATCAGCGTTGGTACAAAATCCTAGAGAAAACAAGGTTCAGTATCAGAGACGCAGAGAGTTTCCAATTGACAGCAGAAAATACTGTTATACACTTGGTTCTGAGCAGAGAAGAAGGTATCTAGTGCGAGCAACGTTTCAGTATGGTATCTTGGATGATGGTGACACATACCCTCAGTTTCAGCTCTATTTGGATGCAACAAAATGGGCTACTGTGTCAATATATGATGCCACAAGAACTTATGTTAAGGAAATGATCTTCAGGGCACCCTCAAACTCCATTGATGTTTGCGTGTGCTGTGCTACCACCGGCTCTCCCTTCATATCTACCCTTGAACTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGAGCAATTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTCCAAGTGAGGATGTAGTCAGGTCTGGTACCCCCTTATACTATTTTTTTCCCTTTTCTTCCAAAAGTTTTTTGCTCAAATATGGGGAGTTTCAACTGTATACACAAAATTTGCATCACTGTTTACTTTGTCTGGAAAAAAGGTGAATATATTTGGTGCCATTAGCTTGATTTGTTTATTAACAAATATGTATCAGGTATCCAGATGACCCATATGATAGAATTTGGGAGTCTGATCTTATTAAAAGACAAAACTATCTGGTTGGGGTGGCCCCGGGCACTGAAAGAATTAATACAACAAAGAAAATAGAAATAGAGACAAGAGAATACCCACCTGTTAAAGTGATGCAGACTGCAGTTGTTGGCACAAAAGGAGTCCTTAGCTATAGACTAAACCTGGAAGATTTCCCTGGAAATGCTAGAGCTTATGCATATTTTGCAGAGATTGAAGATCTGGCTAAGAATGAGACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTACAGTAATGCAGTGGTGAACATAGCTGAGAATGCCAATGGGACCTACACTCTTTATGAACCAAGTTATATGAACGTGAGTCTTGAGTTTGTGCTTTCGTTCTCCTTTGTTAAGACCAGGGATTCTACTCAAGGACCTCTTCTAAATGCAATGGAAATAAGCAAATACGTGCAAATTGCTTCGAAAACTGACAGACAAGACTGTAAGTTCTTAATATCATTTTATAATCTGTAAAAATTATCTTTTCTTGCACGTCCAAGATGTTACATAAAATAATTAGAGTTTGATAAAAAAAAGATTGCATTGCTGCATTGACTGAACAGGTTGCTAACCATATTCTTATTTTACAGCAAATTTTGTTAATGCGTTTCGCTTCTTATCAGCTGGAAGTGCCCTGATGAATGAAGGTGATCCCTGTGTTCCAACTCCCTGGGACTGGATAAATTGTAGTACAACTACACCTCCAAGAATTACAAAGATGTAACACCTCCATACCTTTTTGTTGATGTTTTTTTTTTTATGGTAGCTTCTAATCTGGTGAATTGTCATTCTGTGAATGAAGTCATCTCTGACAGCAGAATTTATGCAGACAACAGTGTTGAATTGTTAAAGTTGGTATAATAGAATGGCAGATATGTGATAATTATACATGCAGAACCAAATAAGCAGAAGCATGATTGAAAATTATCATGAAATGTTTCAATAGTTTGCATGTCATTTTGCCATGGGGAATATTTACTAGAATTTCAAGTAGTACAAATATTTACTAATTGTTATAAGTTGTATTAGAAATCTGTCACGAAGGAATCTGAAGGGTGAAATCCCGAGGGATCTCAACAACATGGAATCATTGACAGAACTGTAAGTAAATCGATCACCTTCAGAATAGAATTTTTTTCTTTTAGATATTGTTTCTTTTGTAATTCATTTTGTTTTCTTAGGTGGTTAGACGGGAACTTGCTTACAGGACAACTTCCTGACATGAGCAATCTTGTCAATCTAAAGATTGTGTAAGTTCTTTAGTTTCACTTATAAAATCTTCTATGAAAAGGTTGTGGTGGAATCAATATGTAGGAAAACACCATTCTATGTTTCCCTTTTCTTATTTTCAATTTCTCAACTACTGACATGCAGGCATCTGGAGAACAACAGATTGGCAGGTCCCTTACCATCTTACTTGGGTAGTTTACCAAGTTTACAAGCACTGTATGCAGCACTTGATCATCCATGTTTATCATCTATACTTTGGGAATTTGAAGCATTTTCCTAGTACCATAATTTTACCCTTCAGACACTTATTATAATCATTCTCATCTCTGGCAGGTTCATACAGAATAACTCTTTTAGTGGGGTAATACCATCAGGTTTACTGTCAGGCAAAATCATTTTCAAGTGAGTACCCACATCAAAAACATTTCTTTTCTAGTTTTAGGTCAATTTAAGTGAAGATGCTAGACACCCAATTGAATTTGAATAAATATGGTAGGACGAGGATCCTTTTTATGCCTTTAATATCGAGATTGAAGTAACCGATATTTATTTTTTCTGCAAGCTTTGATGATAATCCTGAACTGCATAAAGGGAACAAGAAGCATTTTCAGTTGATGCTAGGAATTTCTATTGGAGTACTAGGGATTCTATTAATATTATTCTTAGCAAGTTTGGTTCTATTGCTTAATCTGCGGAGAAAAACTTCTCGACAGAAACGAGATGAAAAGGGTTAGCGCACCAAGCCGAATTTGATACTTGTAAATTGAAAAATATGAAGTTCTACCATAAAAACAATCTTGTGCCTTACAGGTATTTCTGGGCGCAGCAGTACTAAACCTTTAACTGGATACTCATTTGGTCGAGGTGGAAATTTAATGGATGAAGGTACTGCTTGCTATATTACACTCTCTGAGTTGAAAGAAGCTACTAATAATTTCTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGTGATGGAAAAGAGGTGGCAGTTAAGACTATGACCGATCCATCAAGCTATGGGAACCAGCAATTTGTAAATGAGGTAGCATTTCCGTAATTGAATTCTGAATGAGGCTTGGTTCAGTATAGTCAGTCAATCAGTATCATTCTATAGATTTTTGGCTGCATTCATTCAAAAGGATCGTGATCCTTGAATTTCATAAACACAGCATTCTTAATGTTAAAGATACAACGATATCAATTCTCAAACAACTTAAAAATTGCACTATAAAACCTTCTCAACTCCATCTCATGTCTAACTCCAGAAGACTTACTTTCGAACATGAGTTTCCAAAATAACTGACGAGAATGAGAACAGCTTAATTTTCATCCCATTGATTGTAGAGTCACAAATGCAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATGCTGGTTTACGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCACGGTCTAATTCCACACCCTGATGCTCATTTACTTACCTAGTTGTAAAAACTGTGATCTGATATAAATTATAATGCTCTGACAGAATGTTCGAACCAGAAGCAATTGGATTGGTTAGCTCGCCTTCGAATTGCAGAAGATGCAGCTAGAGGTTGATTAATGGCTAGCTTATTGGTCGCTCCACAAGTAATTTTATCTTTTCACTTCCAAGTTAACAGTTAAAGAGCCATTTTCTATTTCTGTAGGTCTTGAATACTTACACACAGGATGCAATCCAAGTATCATTCACCGTGATGTGAAGACAAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTTTCAAGACTCGCTGAAGAAGATTTAACACACATATCAAGTGTTGCAAGGGGAACTGTAGGTTATCTGGATCCTGAGTAAGCCATGGTTCTCACGTGTCTATGTTCAACAAAACATCATTTCTACTTAAAACACTGAGCTCAGGTTTTTTACCCCTCAACAGGTACTACGCAAATCAGCAATTGACTGAAAAAAGTGACGTGTATAGTTTTGGAGTCGTTTTGTTGGAACTGATATCAGGAAAAAAACCTGTATCCTCAGAAGACTATGGTCCTGAAATGAACATCGTTCACTGGGTATGTTATCCTTTTCTCAACAATCCAAAGTCAAAAAATAGCTTCCACAAAGTTTGCCACACCAGAAGCTGAAACATAAACATGTGCAACAATTAAATGTGATCAAGAATCAACTAGTTTTGGTTAAATACAATCCCTAACTTTAAAAAGTTTGTAGTTCTATTGGAAGAAACTGTTCTTTCAGCTGAATTAGCAAACACTTATCTGATGTGGGGTGTGTCGTATTTTCTTAGTTTACCACATGTCATAAAGTTAATCAAATTAGTACAGTAAATTCATATATAACAGTGAAAAACTTGGTCCAACGAAATTATTTCAAGGGATCAAAGTGAAAAGGTTCTGACTTGAGAGAATAAACTAAGACCAAAGAATAAGATTATGGAACAAAAGTTCATTTTAGGCATTAATTTTTGTAGAAAGTACCTCTTTGAATACTTTGATGGCAGCCCCACATGCAAATTTACGTGTTTTGCAGGTAAGATCCTTAATTCGTAAAGGAGATGTGATAAGCATTATGGACCCTTCCCTTGTGGGGAATGCCAAAACTGAATCAATTTGGAGGGTTGCTGAAATTGCTATGCAATGTGTAGAACAACACGGTGCCTACAGGCCAAAAATGCAAGAGGTCATTTTGGCCATACAAGATGCTTCTAGCATTGAAAAAGGCACAGAAAATCAACTCAAGCTATCATCTTCGAGCGGTTCAAAGCCACAGTCTTCTCGTAAGACTTTGCTTGCAAGTTTTCTAGAAATTGAGAGCCCTGATTCCTGCCTCCCCTCAGCCAGATAA