Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21614 LG5 34848351 34851165 PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 34848357 missense_variant p.Asn860Tyr
A/T 34848358 stop_gained p.Tyr859*
T/G 34848381 missense_variant p.Ser852Arg
A/T 34848456 missense_variant p.Phe827Ile
C/T 34848492 missense_variant p.Glu815Lys
G/A 34848537 missense_variant p.Arg800Cys
G/A 34848819 stop_gained p.Arg706*
A/G 34849195 synonymous_variant p.Ala657Ala
C/G 34849320 missense_variant p.Glu616Gln
C/T 34849402 synonymous_variant p.Val588Val
C/A 34849510 synonymous_variant p.Gly552Gly
T/G 34849724 missense_variant p.Gln481Pro
A/G 34849737 missense_variant p.Ser477Pro
T/A 34849762 synonymous_variant p.Gly468Gly
T/C 34849794 missense_variant p.Thr458Ala
T/C 34849948 synonymous_variant p.Gly406Gly
A/G 34850401 synonymous_variant p.Ser255Ser
C/T 34850433 missense_variant p.Ala245Thr
G/A 34850497 synonymous_variant p.Leu223Leu
A/G 34850530 synonymous_variant p.Tyr212Tyr
T/G 34850611 synonymous_variant p.Ser185Ser
C/T 34850812 synonymous_variant p.Lys118Lys
G/T 34850986 synonymous_variant p.Thr60Thr
C/T 34851144 missense_variant p.Val8Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21614.1
MVAEKTNVTTSCQFSQHEVGNADHVSDKKKERWKKTPSKAHNSPCSFLFLFWVWTLVLSTCLKSVLCEDEGWDGVVVTASNFLALQAFKQELVDPEGFLRSWNDSGYGACSGGWVGIKCAKGEVIVIQLPWKGLRGRITDKIGQLQGLRKLSLHDNQIGGSIPSTFGLLPNLRGVQLFNNRLTGSIPSSLGYCPLLQSLDLGNNLLTGAIPYSLANSTKLYWLNLSFNSFSGPLPASLTHSLSLAFLSLQHNNLSGPLPNSWGGSSKNDEFFRLRNLLLDHNFFTGNVPSSLGGLRELNEISLSNNRFSGAIPNEIGSLSRLKTLDISNNALNGSLPATLSNLSSLTLLNVENNLLENQIPGTLGSLHNLSVLILSRNQFSGHIPSSIANISTLKQLDLSLNNLSGEIPVSFNSQRSLDLFNVSYNSLSGSVPPQLARKFNSSSFVGNIQLCGYSPSTPCPSQAPSEGVIAPPHEMSKHHQHRKLSTKDIILIVAGVLLIVLIMLCCILLFCLIRKRSTSKTENGRGVGRTGATRAEKGIPPVAAGDVEAGGEAGGKLVHFDGPIAFTADDLLCATAEIMGKSTYGTVYKAILEDGSQVAVKRLREKIAKGQREFESEVSVLGKIRHPNVLALRAYYLGPKGEKLLVFDYMPRGSVASFLHGSGTETSIDWQTRMKIAQDMARGLLYLHSQENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANSKTDIYSLGVILLELLTRKSPGVSMNGLDLPQWVASIVKEEWTNEVFDADLMRDSSTVGDELLNTLKLALHCVDPSPSARPEVHQVLQQLEEIRPERSVTASPGDDSII*


CDS Sequence:
>Vu_21614.1
ATGGTAGCCGAGAAAACCAACGTTACTACCTCTTGTCAGTTTTCTCAACATGAAGTAGGAAATGCAGACCATGTTTCTGACAAGAAGAAAGAAAGATGGAAGAAGACTCCGTCCAAGGCGCACAACAGCCCGTGTTCTTTTTTGTTTCTCTTCTGGGTCTGGACTCTTGTTCTCTCCACCTGTTTGAAATCGGTTTTGTGCGAAGATGAGGGTTGGGATGGCGTGGTTGTGACGGCATCAAACTTCTTAGCACTTCAAGCGTTCAAGCAAGAGTTGGTTGATCCCGAAGGCTTCTTGCGGAGCTGGAATGATAGTGGCTATGGAGCTTGTTCCGGAGGTTGGGTTGGTATCAAGTGTGCTAAGGGAGAGGTTATTGTAATCCAGCTTCCGTGGAAGGGACTGAGAGGGCGTATCACTGATAAAATTGGGCAGCTTCAAGGTCTTCGAAAGCTCAGTCTTCATGATAATCAAATTGGTGGTTCAATCCCTTCCACTTTTGGACTTCTTCCTAACCTTAGAGGGGTTCAGTTATTCAACAATAGGCTTACAGGTTCAATCCCTTCTTCTTTAGGTTACTGCCCTTTGCTTCAGTCTCTTGACCTCGGCAACAACTTGCTCACAGGAGCAATCCCTTATAGTCTTGCCAATTCCACCAAACTTTATTGGCTCAACTTGAGTTTTAACTCCTTCTCTGGTCCTTTACCAGCTAGCTTAACTCACTCACTTTCCCTCGCATTCCTTTCTCTTCAACATAATAATCTATCTGGTCCCCTTCCTAACTCTTGGGGTGGGAGTTCTAAGAATGACGAGTTCTTTAGGCTTCGAAATTTGCTCCTAGATCATAACTTTTTCACTGGAAACGTTCCTTCTTCTTTGGGTGGCTTAAGAGAACTCAATGAAATTTCCCTTAGTAATAATAGGTTTAGTGGAGCTATACCGAATGAAATAGGATCTCTTTCTAGACTCAAGACACTAGACATTTCTAATAATGCCTTGAATGGGAGCTTGCCTGCTACCCTCTCTAATTTATCCTCGCTTACACTGCTGAATGTTGAGAACAACCTCCTAGAAAATCAAATCCCTGGAACTTTAGGAAGTTTGCACAATCTTTCTGTTCTAATTTTGAGTAGAAACCAATTTAGTGGGCATATTCCTTCTAGTATTGCAAACATTTCCACTCTTAAGCAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGTCTCCTTTAACAGTCAACGTAGTCTTGATCTCTTCAATGTTTCTTATAATAGCCTCTCAGGTTCTGTTCCCCCTCAACTTGCCAGGAAGTTCAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGATACAGCCCCTCAACACCATGTCCTTCACAAGCTCCATCAGAAGGAGTCATTGCACCACCTCATGAAATGTCAAAACACCACCAGCATAGGAAGCTAAGTACCAAAGACATTATTCTCATAGTAGCAGGAGTTCTTCTCATAGTCCTGATCATGCTTTGTTGTATCCTTCTGTTCTGTTTGATCAGAAAGAGATCAACATCAAAGACGGAGAATGGCAGAGGTGTAGGGAGAACTGGAGCTACGAGGGCAGAAAAAGGAATCCCTCCTGTTGCTGCTGGTGATGTTGAAGCAGGTGGGGAGGCTGGAGGGAAACTAGTGCATTTTGATGGACCAATAGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCTGAGATAATGGGAAAGAGCACCTATGGAACTGTGTATAAGGCTATATTGGAGGATGGGAGTCAAGTTGCAGTGAAGAGATTGAGGGAAAAGATCGCTAAAGGTCAGAGAGAATTTGAATCAGAAGTCAGTGTTCTGGGAAAAATTAGACACCCCAATGTTTTGGCTCTGAGGGCCTATTACTTGGGACCCAAAGGGGAGAAGCTTCTGGTTTTTGATTACATGCCCAGAGGAAGTGTTGCTTCTTTCCTACACGGTAGTGGAACTGAAACATCCATTGATTGGCAAACAAGGATGAAAATAGCACAGGACATGGCTCGTGGCTTGTTGTACCTCCATTCCCAGGAGAATATTATACACGGAAACCTCACATCCAGTAATGTACTGCTCGATGAGAATACAAATGCTAAAATTGCAGATTTTGGTCTTTCTAGGCTGATGACAACTGCTGCTAATTCCAACGTGATAGCTACTGCTGGAGCATTGGGATACCGCGCGCCCGAGCTCTCCAAGCTCAAGAAAGCCAACTCCAAAACTGATATCTATAGCCTTGGTGTTATCTTGTTAGAACTCCTAACGAGGAAGTCACCTGGGGTGTCTATGAATGGATTAGATTTACCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGACGCGGACTTAATGAGAGACTCTTCAACAGTTGGCGATGAGTTGCTGAACACATTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCATCAAGTGCTACAGCAGCTGGAAGAGATTAGACCAGAGAGATCAGTCACAGCCAGTCCTGGGGATGATTCTATAATATAG


Promoter Sequence:
>Vu_21614::LG5:34851165-34853165(-)
TTGTAAAATCAAGTTATTTTCTGCCGGTACTTAGTTGTAATAAAAATAATATACATTCAAAAATATCGACTTGAAATACCAGTACTTACTAATATTATTGCTACTATGCATAAAAAAAAGTTATACGTTATAATCATAATATGTACTTATTGAATCAAAATTATTCTTGCAATTTTTTTTTACTTCACGAATTTTTATTAATTGATATTCGTGTTCCGAATCCCTTTTCATTGGTGGAATACTTACAAAAATTTCTCCTCAAATTAGTGTTATAGATAAGAGATTTTAGCTAAAATTATATTAATACAAAAGTGAAACATGATTAAAATAATATTTATAAAAGTATTTTATTAATTATAGATTCTCATCTTAATAGGTCTTAATTATAAGCGAATTGATCCATAGGTCAAATGATCAGTTTATATGTAATAATCTATAATATTTTTTTCTAAGTTACCCAATACGTTTTTTATAGACAAATAAGTACATATAAGTGACACTCAGCTCCAGTGAGTGTCCATTATGCAAGTGTCATATTAAATTTAATCATTTAGAAATACAATCCTTAGTTTTTAATATTTATATTAAAGTGTACTGGTTACAAAATATTTGGTAACAGGTATGGGATATATGGTATCCTATTTATATTTAATTAACCGATCATCTTAATATTATAATTAATAAAATCTAAAGATCTTCAACCACGTACTATATAAAATAAGACACACACGCATTATTATTCTAAATTAGAACATAGAATATGATTTGGTATTATATGGTATCTCCATACTAGATTGATTATAACAGAGGCATTATATGTGCTAAAATAATTTAAAAAAAAAAATGTGAGAAGACGAGTTTTAATAACGGTCTGAGGCCTACACTTCTGACACCTTAAAAGGGAATATAATAGTTCTTTCCTACGAAAAACGACATGAAGAAAGTGTCAAAAACTAAAAGAGATGGATATTAAGGTCGTTGGAATTAACATTGTGGACCTATAAGTACTATGAACATGATGATGAAGACCACACTTCTGAGTATTGGGACAGCCATCCATGATATCAATTTTCTTCACTCTTTATGTTTCCTTTTTTTCTGATACTTTCTCTTCCCCAGTTACTCCCTCTCCCTCTTCACCACGTGACACATTTCACTCAAACTTGAAGATGCCACCACCCCATGTTCATGTCAGGCAAGCCTCTACAAATTATATAAAATCATTAGAAACAGTGTGTCCAAATGAAAGCAAGATATGGGGAGAAATATTCACTACATTCAATTTTAGTCTTCCGAATAAGAAAATATAATTCTTTTATATTTTACAATAAATTAATATCTATTTTAAAACGTCTTGTTGTTTTCATCTAGTGATTCGTCTAAAATTTCTTTAATTTTTACTAATCTTGGTATGATATGTAATAAGGGTTAATGATTTTTTAATATAGTCTTTACTAGTATCTAAAATTTGTCGCACAAGAAAAAGTGTGAGCATATTAATAAAAAAATGTAAATATAGATGAGATATAAATACTTCAGAATTAAGAGCAGGTTTTGTTCTGAATTACCGAATATTTTATGTGTGGGGAGTGGAAGCAGAAGAGGATGAGGAAGGAGCCGTTGGGGGTGGAGGGGCGCGGCTTCTGCAATAAAAGAATAGCGCGCCATCATTTTAACTTAACCCTTCCAACATATTATCGCACCACTTTACTAATACTAATGCTCGTCAATAGTTTCAACTTACAAGAAAACTAGCCGTTGCTCACTGTTTCTCGCAAACAAAGACAACTCTGCATTCACTCTTTCTCTCTGTTACGCTCTCAACCCCCGCGCGCACCTACACTTCTTTATGTCATCACGTGATCCTTCTCCTTCCCTCTCTCTCTCTCTCTCTCCTCACTACAAAAACCATTCTTCAACTGTTCTTGTCTATCTCCACATCACTTCCAACACACACTCCCTCTTTCTGTTCCACTGATTCAAAATCATTTCTTTTAGTT


Gene Sequence:
>Vu_21614(-)
ATGGTAGCCGAGAAAACCAACGTTACTACCTCTTGTCAGTTTTCTCAACATGAAGTAGGAAATGCAGACCATGTTTCTGACAAGAAGAAAGAAAGATGGAAGAAGACTCCGTCCAAGGCGCACAACAGCCCGTGTTCTTTTTTGTTTCTCTTCTGGGTCTGGACTCTTGTTCTCTCCACCTGTTTGAAATCGGTTTTGTGCGAAGATGAGGGTTGGGATGGCGTGGTTGTGACGGCATCAAACTTCTTAGCACTTCAAGCGTTCAAGCAAGAGTTGGTTGATCCCGAAGGCTTCTTGCGGAGCTGGAATGATAGTGGCTATGGAGCTTGTTCCGGAGGTTGGGTTGGTATCAAGTGTGCTAAGGGAGAGGTTATTGTAATCCAGCTTCCGTGGAAGGGACTGAGAGGGCGTATCACTGATAAAATTGGGCAGCTTCAAGGTCTTCGAAAGCTCAGTCTTCATGATAATCAAATTGGTGGTTCAATCCCTTCCACTTTTGGACTTCTTCCTAACCTTAGAGGGGTTCAGTTATTCAACAATAGGCTTACAGGTTCAATCCCTTCTTCTTTAGGTTACTGCCCTTTGCTTCAGTCTCTTGACCTCGGCAACAACTTGCTCACAGGAGCAATCCCTTATAGTCTTGCCAATTCCACCAAACTTTATTGGCTCAACTTGAGTTTTAACTCCTTCTCTGGTCCTTTACCAGCTAGCTTAACTCACTCACTTTCCCTCGCATTCCTTTCTCTTCAACATAATAATCTATCTGGTCCCCTTCCTAACTCTTGGGGTGGGAGTTCTAAGAATGACGAGTTCTTTAGGCTTCGAAATTTGCTCCTAGATCATAACTTTTTCACTGGAAACGTTCCTTCTTCTTTGGGTGGCTTAAGAGAACTCAATGAAATTTCCCTTAGTAATAATAGGTTTAGTGGAGCTATACCGAATGAAATAGGATCTCTTTCTAGACTCAAGACACTAGACATTTCTAATAATGCCTTGAATGGGAGCTTGCCTGCTACCCTCTCTAATTTATCCTCGCTTACACTGCTGAATGTTGAGAACAACCTCCTAGAAAATCAAATCCCTGGAACTTTAGGAAGTTTGCACAATCTTTCTGTTCTAATTTTGAGTAGAAACCAATTTAGTGGGCATATTCCTTCTAGTATTGCAAACATTTCCACTCTTAAGCAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGTCTCCTTTAACAGTCAACGTAGTCTTGATCTCTTCAATGTTTCTTATAATAGCCTCTCAGGTTCTGTTCCCCCTCAACTTGCCAGGAAGTTCAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGATACAGCCCCTCAACACCATGTCCTTCACAAGCTCCATCAGAAGGAGTCATTGCACCACCTCATGAAATGTCAAAACACCACCAGCATAGGAAGCTAAGTACCAAAGACATTATTCTCATAGTAGCAGGAGTTCTTCTCATAGTCCTGATCATGCTTTGTTGTATCCTTCTGTTCTGTTTGATCAGAAAGAGATCAACATCAAAGACGGAGAATGGCAGAGGTGTAGGGAGAACTGGAGCTACGAGGGCAGAAAAAGGAATCCCTCCTGTTGCTGCTGGTGATGTTGAAGCAGGTGGGGAGGCTGGAGGGAAACTAGTGCATTTTGATGGACCAATAGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCTGAGATAATGGGAAAGAGCACCTATGGAACTGTGTATAAGGCTATATTGGAGGATGGGAGTCAAGTTGCAGTGAAGAGATTGAGGGAAAAGATCGCTAAAGGTCAGAGAGAATTTGAATCAGAAGTCAGTGTTCTGGGAAAAATTAGACACCCCAATGTTTTGGCTCTGAGGGCCTATTACTTGGGACCCAAAGGGGAGAAGCTTCTGGTTTTTGATTACATGCCCAGAGGAAGTGTTGCTTCTTTCCTACACGGTAAGTTTGATATTGCAAATAGGGGAAAAATTATTTAGTTCTTTAAGCATTCACTATTCATCTTGCTATTGTGCATAATCCTTTAATTCAAACTTCTATTAGCAAAATTGCGGATTACTAAAATGAAACTTATTTCTGATCGTAGAATAACACAGATAACTCCTAAGTCATTTGTTTTATTAATATAGCCTACTATAAGTCAAGTATTTTCTTTTTCATCTTTATGCAGGTAGTGGAACTGAAACATCCATTGATTGGCAAACAAGGATGAAAATAGCACAGGACATGGCTCGTGGCTTGTTGTACCTCCATTCCCAGGAGAATATTATACACGGAAACCTCACATCCAGTAATGTACTGCTCGATGAGAATACAAATGCTAAAATTGCAGATTTTGGTCTTTCTAGGCTGATGACAACTGCTGCTAATTCCAACGTGATAGCTACTGCTGGAGCATTGGGATACCGCGCGCCCGAGCTCTCCAAGCTCAAGAAAGCCAACTCCAAAACTGATATCTATAGCCTTGGTGTTATCTTGTTAGAACTCCTAACGAGGAAGTCACCTGGGGTGTCTATGAATGGATTAGATTTACCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGACGCGGACTTAATGAGAGACTCTTCAACAGTTGGCGATGAGTTGCTGAACACATTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCATCAAGTGCTACAGCAGCTGGAAGAGATTAGACCAGAGAGATCAGTCACAGCCAGTCCTGGGGATGATTCTATAATATAG