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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21594 LG5 34687299 34688230 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/G 34687312 3_prime_UTR_variant
G/T 34687616 3_prime_UTR_variant
G/T 34687770 missense_variant p.Leu133Ile
G/A 34688225 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21594.1
MKGYEPRSSSSCAACKLLKRRCVPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVSEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARCHAAATVLPSPDILHAHVSLPPFPDFCTSSNDFNDIFCHSSSSQLFSRHETVDDFNQIPYIF*


CDS Sequence:
>Vu_21594.1
ATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCATGTGCAGCTTGCAAGTTATTGAAGAGAAGATGCGTACCCAATTGTATTTTTGCACCTTACTTTAGGTCTGATGAGTGCAAGAAGTTTGCCAAGGTGCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAGATCTTGATCGAAGTGTCGGAAGAGCAGAGAGAGGACACCGTCAATTCTCTCGCGTATGAGGCCGAGGCAAGGCTCAGAGACCCCGTTTATGGATGCATTGGTGCCATAGCTCTGTTGCAGAGGAAGATGGTCGAGCTTCAACATGATCTCGCCATTGCTAAGGACCGTCTTGCACGATGTCACGCTGCTGCTACTGTTCTCCCTTCTCCTGATATCTTGCATGCCCATGTTAGCCTCCCTCCATTCCCTGACTTTTGCACTTCCTCCAATGATTTCAATGATATCTTCTGCCACAGTTCGTCATCTCAATTATTCAGCCGCCACGAAACGGTCGATGATTTCAACCAAATCCCATATATATTTTAA


Promoter Sequence:
>Vu_21594::LG5:34688230-34690230(-)
CAATCACTCATTTGTTCCCCCTTTTATAATCACTATTCTCATTCTCTTCTTTTCTCACAAGCTCCCAGAAACAAAAAAACACATAAATTCATGTATTTCTCTTTAATTACAGATCAAATGCTAAAATCAATTACAAAATTTTATTTACCCTTCCAGTTTCAACCCAGAACATGAGTAAAAAATAGCTATAATTCATTCTAAATTTGAAAATGTTGTACTGTCAATTTTGCATATTATTCATATAATTCTTCAATCACAAGTTTCGACATTTCCAACCAACGGTGGTTTGCATTATGCTAAAGATAGAGGGTCATTTTATGTTTGTTATTCTTAAAAAAGCATCAGGTCCTCTTCACCTAGTGCTCGATACTTTACTGATGAATCTTCCCATTCTTTACATTTCAAGCAAATATTTTGGTGAAAGGTTACCGACAAAAGATAAAATGTCAATTTTTGGTGCATCATCATTGTTTTCCATGTTAAAAGAATTTTTTAATTTTCACTTTTCAGCATAAACCTATAACCATTTAATCTTGTTCTAAAGTCTGTTTTGCAGAAAATGGAAACTGTCTGCACTTATCAATCATGCTAAACATAGTCGTTCCAAAGCCTACAATGATAGATGTATGGAAAGTTTTAAAGATGAATCTTTCTATATTTAATGTTCGTGATCCAAGTTTATCGATATTTAATAATAATGGTAACATCACTTTCTACTCACATTCATGTAAACTAAATTCTCACCACTTTATTTTTTCTGGAGGGGGATAAGGTTATCCCACTTGGTTTTGGTATGCTTGAAAAGTTTATGCAAGTACCTTTTATAGCATGAATAATTCATTATTATTATATTATATTGAATAAGACAACCTAAACTACTTTTTCATTTTTGAGGGAACACGTAAGATGGAGTACAGAAAATGGATTATAACGGGTGATTTGAAACGTTTATCTTGAACAGGAAAAAAAAAAGGTTAACAAACCAAAGTACTCCCTGGTAATGAATGAATTGACACTTAAAAAAGAAAAAGAAGTTCAACAGAGTTAAGGAAACAAAAATAATCAACATCAAGGAACAGATATATAACGGCGAGACCATAAACGAAAAAGGGTGAGTGATCTTAGGTGGTTTACCTGGCTCGTAGATGATTTTCATGTGGTTAAATTTGGCAGGCAGTGATTTTGTTTCCATGTGTTTCACCTTAAATTTGGAGTTGGTGTGTTGGAATTGAACTAGGAAATGGAAAAGAAATCACAACTGAAAAAACTAAACATGTTATGATAGAGGGCACAAAACAATACAGAAAACAAGTTGATTTAATGGTTTTTGGCTGCACTCATGCTATACAGCCAAACCAGTTCATTTCAAAGTACTCATTTTGATCCCATCAATTTGCTTCTTGCGACCATACCTCTTTGGTTTACCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGCAAAAGCATGATTTAAAAAATTTATGGAATGGATTATTTCCTTCCTTCAATCAATCAAAATATTCCATCTTTATTCATGAACTATCATGTCTGACTTGAAAACTACCAACACATCGCACCCATTGTCTGAATGAATCAATTATTTGGACCTACTTTTGCACTCCCAGTTTGAATGAATGGTATAAATGAGAAATTGAATATGAATACTGCCTAGAAAAACCAAAATGGCAAATGAATTTTCTTTTGTAAAAAAGCAAATGGAAAATGAAATGAGAAGACAGCAATGGCCCATGCAGGTCCCAAACCTGCTACTACTACCTTCTTGTTACTGGCACGGTGATCAATCCAGCCGAGCTAATAGGCGATGACACGTAATTGCTCACAAAATAGACCATTGGGAAAGAGATATTAATGCTGTATATATACAAATTTTTAAACAAAATATCGCTTTTTTTTTTCTAAATAGAATTATGATTATGTTAATTTAAAATATTAAAATTCCAAGAGAGGAAATAGAAATAGGCACACAAAGGACCACATATTT


Gene Sequence:
>Vu_21594(-)
ATGAGCGCAAAGGATAGAGGATAGAGTATAGAGTTTAGAGTAACACAGGAAGAAAGTGAGAGGCATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCATGTGCAGCTTGCAAGTTATTGAAGAGAAGATGCGTACCCAATTGTATTTTTGCACCTTACTTTAGGTCTGATGAGTGCAAGAAGTTTGCCAAGGTGCACAAGGTTTTTGGAGCCAGCAATGTCAGCAAGATCTTGATCGAAGTGTCGGAAGAGCAGAGAGAGGACACCGTCAATTCTCTCGCGTATGAGGCCGAGGCAAGGCTCAGAGACCCCGTTTATGGATGCATTGGTGCCATAGCTCTGTTGCAGAGGAAGATGGTCGAGCTTCAACATGATCTCGCCATTGCTAAGGACCGTCTTGCACGATGTCACGCTGCTGCTACTGTTCTCCCTTCTCCTGATATCTTGCATGCCCATGTTAGCCTCCCTCCATTCCCTGACTTTTGCACTTCCTCCAATGATTTCAATGATATCTTCTGCCACAGTTCGTCATCTCAATTATTCAGCCGCCACGAAACGGTCGATGATTTCAACCAAATCCCATATATATTTTAATCTTATGTATGCATGTTATGGTCCCCTTTTCCATGTAATTGTTGTTATCAGTCTTTCTAATCAATCATGAGCAGCTACGGTCTGATGTATGTGCTAATGAATAAGAACTCCAGGAGAATGAATAGGGCTGAATTGAAAACTCTCAACCAAAATGTATTATTGCTTTGTGTTGTTGATTTGCTAAATTTCACGGTTTCTACGCTGCTATGGCAGCTAGCAACTGCTGGAAAATGATGGGTATCTTGGCCTTTTTAGGTTCACTTTTGTAACAGCATATCAGTAATAGGATTTTCGTTGTTCCTGCTTTCCAACTTTTCAAAGTGACCATAAATTTTACCTC

NIPGR © 2020

This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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