Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21592 LG5 34666700 34671939 "PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 34666991 stop_gained p.Lys98*
C/T 34667008 splice_region_variant&intron_variant
A/T 34667097 intron_variant
C/A 34667113 intron_variant
G/A 34667205 intron_variant
T/G 34667208 intron_variant
A/G 34667477 missense_variant p.Ile162Val
T/C 34667626 synonymous_variant p.Asp211Asp
T/C 34667674 synonymous_variant p.Ser227Ser
A/G 34667830 intron_variant
A/T 34667852 intron_variant
A/T 34668044 intron_variant
A/G 34668054 intron_variant
C/A 34668169 intron_variant
C/A 34668173 intron_variant
A/T 34668238 intron_variant
T/A 34668299 intron_variant
G/A 34668457 intron_variant
C/T 34668474 intron_variant
T/C 34668644 intron_variant
C/T 34668660 intron_variant
A/G 34668673 intron_variant
A/T 34668675 intron_variant
G/A 34668771 intron_variant
A/T 34669001 intron_variant
A/G 34669031 intron_variant
C/T 34669073 intron_variant
A/T 34669153 intron_variant
T/A 34669189 intron_variant
C/T 34669229 intron_variant
A/G 34669234 intron_variant
G/C 34669270 intron_variant
A/G 34669285 intron_variant
T/C 34669307 intron_variant
T/C 34669319 intron_variant
T/C 34669325 intron_variant
T/C 34669328 intron_variant
C/T 34669336 intron_variant
T/A 34669365 intron_variant
C/A 34669405 intron_variant
G/A,* 34669417 intron_variant
G/A 34669418 intron_variant
A/G 34669429 intron_variant
C/T 34669507 intron_variant
G/A 34670406 intron_variant
C/T 34670420 intron_variant
A/G 34670473 intron_variant
T/A 34670557 intron_variant
C/T 34670586 intron_variant
G/A 34670601 intron_variant
G/A 34670695 intron_variant
T/C 34670773 intron_variant
A/C,G 34670903 intron_variant
C/T 34671096 intron_variant
C/A 34671111 intron_variant
G/A 34671140 intron_variant
G/A 34671156 intron_variant
A/G 34671165 intron_variant
A/T 34671335 intron_variant
G/C 34671340 intron_variant
G/C 34671345 intron_variant
A/G 34671423 intron_variant
C/T 34671491 intron_variant
C/A 34671500 intron_variant
A/T 34671502 intron_variant
T/A 34671534 intron_variant
T/A 34671701 intron_variant
C/T 34671710 intron_variant
T/A 34671713 intron_variant
A/T 34671762 intron_variant
A/G 34671921 missense_variant&splice_region_variant p.Ile531Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21592.1
MVSIVTMENYYDSGWHMSTSWAQCSDHSSSFAVPTQILPHATDSASLQFGEFHSWPLPIEGAEEERAMSASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDVSRAFTVPTEIDEVSIDCDHVEDESCTKVNKLKENIVIKASVCCDDRPELFPELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKDSEEGVCLTTLKQSLKSAVTKIASSSMTSNCPTRNHLLLVTLRLNSIPKALDFINYLRSRTEHHQALSCVFEGALELATQHPNSQKELLMLHSYRKSNGDNIALTSRSAFLLLKCLGEAQMVDDSLLLFKELDPCSKSSGICNELLKGLFKSGCIDDALQVIDEMLERDSDFPPDDFTGEVVFGVLGKQERHGRSFADNEIVGLVTKLCEHGVFPDAFKLTQMITKMCRHRKNGVAWDLLHVVMRLGGAVAVKAASCNALLTGLGRERDIQQMNKLMAEMEEMGIKPSVVTFGILVNHLCKARRIDEALEVFDKLSGKGEGFKLLL*


CDS Sequence:
>Vu_21592.1
ATGGTTTCCATTGTGACTATGGAAAACTACTATGATTCTGGCTGGCACATGAGCACCAGCTGGGCTCAATGCAGTGATCATTCTTCTTCCTTTGCAGTTCCTACACAAATACTTCCTCATGCCACTGACTCTGCCTCTCTTCAATTTGGTGAGTTCCACTCATGGCCACTTCCCATTGAAGGGGCCGAAGAAGAGAGAGCAATGAGTGCTTCCAAGAGCCACAGCCAAGCTGAGAAAAGGCGCAGAGACAGAATCAATGCACAGCTTGCAACTCTCAGAAAACTTATTCCCAAATCCGATAAGATGGACAAGGCAGCTTTACTAGGGAGTGTGATAGACCATGTCAAAGATCTAAAGAGAAAAGCCATGGATGTTAGCAGAGCTTTCACAGTTCCAACTGAAATTGATGAAGTATCAATTGACTGTGACCATGTAGAAGATGAAAGCTGCACTAAAGTGAACAAATTGAAGGAGAATATTGTGATCAAAGCTTCTGTTTGCTGCGATGATCGACCAGAACTGTTCCCTGAACTCATCCAAGTCCTCAAGGGCTTGAGACTGACGGCAGTTAAAGCTGACATAGCCAGTGTAGGTGGCCGGATCAAAAGCATATTGGTGCTTTGTTCTAAGGATAGTGAAGAGGGTGTTTGCCTCACCACTCTCAAACAGTCCCTCAAATCTGCTGTCACCAAAATAGCTTCATCATCCATGACATCTAATTGCCCCACCAGAAACCATCTCCTCCTTGTCACTCTCCGCTTAAACTCCATTCCCAAAGCCCTCGATTTTATCAATTACCTCAGAAGCAGAACAGAGCACCACCAAGCCCTCTCTTGTGTGTTCGAAGGCGCTCTTGAACTCGCTACGCAGCACCCTAATTCGCAGAAAGAGCTTCTCATGCTTCATAGTTACCGAAAATCCAATGGTGATAACATTGCTCTCACTTCCAGATCTGCTTTCCTCCTTTTGAAGTGCCTAGGGGAGGCCCAAATGGTGGACGATTCGCTTCTTCTGTTCAAGGAGCTCGACCCCTGTTCCAAAAGTTCCGGAATTTGCAACGAATTGCTTAAGGGGTTGTTTAAATCGGGTTGCATTGATGATGCCCTCCAGGTGATTGACGAAATGCTTGAACGGGATTCTGATTTTCCTCCCGATGATTTCACGGGGGAAGTTGTTTTTGGGGTGTTGGGGAAGCAGGAGCGCCATGGAAGAAGCTTTGCTGATAATGAAATTGTGGGGTTGGTTACCAAGCTGTGTGAGCATGGAGTTTTCCCTGATGCGTTTAAGCTTACCCAAATGATAACGAAGATGTGCCGGCACCGGAAGAATGGTGTGGCGTGGGATCTTTTGCATGTTGTGATGAGATTGGGTGGTGCAGTTGCGGTTAAAGCTGCGTCTTGCAATGCTCTGTTAACTGGGTTGGGAAGGGAGAGGGACATTCAGCAGATGAATAAACTGATGGCAGAAATGGAAGAGATGGGGATAAAGCCCAGTGTTGTGACCTTTGGGATTCTTGTTAATCATTTGTGCAAAGCTAGGAGGATTGATGAGGCACTGGAGGTATTTGATAAGTTGAGCGGCAAAGGAGAAGGATTTAAGTTGTTGCTCTAA


Promoter Sequence:
>Vu_21592::LG5:34664700-34666700(+)
TCTATCATGCAATTATTTACACTTTCATCTGCTGCAAAGCTCTCTAAATAATACAGTGTACCTTGCGAAGCTCAAAACAAAGTGCCCTCAATTTATGGTTACAAAAAAGATTGGTTCTGCCATCTTTTTTTCTTCTGCATTTGATTCAAATTCAATGTTCTTCCTTCATTCTTGCAGTGTACTAATTACAGGCTTCGGTGATTTGAAGATTTTTTCGCCATCCTCAGTGCATAAGCACGAGTACCAACACCAACAAGAAGCAGGGAAGATTAGAACACCAGCAAAGAGAAGAGACAAGGAAGATAAACTTGTTAAACACATGTGTTTCATTTGTTGACACATTACAATTTCAAGAGACGTGTTGTCTGTGTTCACTGTGATCCTTTTGGTTTTCCATATTTTTATCGTGACACTTCACTTGCCGACGGGGTGTATGTGTGTATGTCAATGTGATTATTGTAAGATATACTGCAGATATGTTCTGAGATGATGGGACCCAGAAAGGCTTTGATGAGACAGATAGAGAAGGAAAAAAAATATGAAAAAAAAGTGAAAGAAGAAAATACGGAACCATAAGAAACCACATACACAAGTTGTGTTGTATAACAAAGTGAGTGGTTGATCAGAAGTCGTGTCACTCTTTATTATGAGTTGCAATTGTGAGTGTGTATTGGACCCTACATGCAAGTAATTGAGCCTTCTTTGTTTGCTAGCAGACATACTAAGCAACCCTTTCCTATCATAGTGTATAAAACTATCCTTCTTTTACTGAGTCCCATGCTTTCATCTTTGAACTTCAAATCAAGATACATGAAGCTAACCAAATCTTGTCTTAGGTTTGATACACAGCTGGACTAGTCAAGTTACTTGCATAGCATAAATTTGGTAAAATGGACCCACCCATTGTCTTCAACTTAAAGGGCAAATCGTGTACTAATCAGGTTACATCATGCGTTTGTCCAATTTCTGATTCAGCAAAATCTTGGGCTTTCTTCTTTTTTTTATCAATGATCCTAGTTTGTGTGTGCTTATTTTCTTTTGGTATCCCTTTTCATCTTGGCTATCATGACGGGGACTAAAACTTTGGTTGGAATAATTGTACAGGGACATGGGTGAAAGAAAGCGTGAAAGCTTAATTTCACCAAATTTATAATTCAGTGTGGAAGATCTTGCAGTATCTTTGATGAATGGGATCCACCACCACAAGCCTAGACACCACTTTCGTGTAAGCTTCAGTGCCTACTTTTTTTACTTTATCAAACGATTAACCACTAAAAAGTATATATTTAAACAGCTTATGAAGGTTGATGTGTGACTTCTTTGGTACAATGACTGACTTTATTTCAGATAACATCTAGGTAAATGTTATGAAAATAATACAAGTGATTCTTCTTCTATTGTTAAGTATACGTGCACTGCTATTTTATATGAAAAAGCAATTAATCTGAAGTAGTCATGTTTGGCACAAAAGTTCAAGATAAGTAAACCAACTCGAGTTCTTATTCGATAGGATCTACGCTAAACACCAAGGGAGACCAAACAGCTATAATTATCGGTAGATCAGATAAAACACTTTCTGGTCTAATAAAAATAAGACAATGAGTCTCTGATCATCATCCACTACATCAACTACTGACTACGTAACAGTGTTCCCCCAAATCTATTTGCCAGATACTACTCATGCATACCATTTCATTTCTCATTCAAATACGAATAATATTAGCTTAGTAGGTCAGGTCACCTCTTTCTTATTCTTTTACTCTTCATTTTCCCCTCCTTCAAAAGTCCAAGTTCGTTAGATTTAGCGAAGGGAAAATTTTTCTTGTTGAAGTGACTGACAGGTACAGCCAAAATCGATTATCATTTTGACCAATGAATGGGTATTGCTTATCACAGCAGTCGCCATCAAGATAAGAAGATGATCGACCATTATTAGTGCAGCAAACAGTAACTATGGATGGGAGATAAAAGGTTCAGAAATCATGGAAAAAACTTTAGAA


Gene Sequence:
>Vu_21592(+)
ATGGTTTCCATTGTGACTATGGAAAACTACTATGATTCTGGCTGGCACATGAGCACCAGCTGGGCTCAATGCAGTGATCATTCTTCTTCCTTTGCAGTTCCTACACAAATACTTCCTCATGCCACTGACTCTGCCTCTCTTCAATTTGGTGAGTTCCACTCATGGCCACTTCCCATTGAAGGGGCCGAAGAAGAGAGAGCAATGAGTGCTTCCAAGAGCCACAGCCAAGCTGAGAAAAGGCGCAGAGACAGAATCAATGCACAGCTTGCAACTCTCAGAAAACTTATTCCCAAATCCGATAAGGTAAACCAATTTAATGCACAAGTCTCTCTTTTTCAGTTTTCATGAGTGGCATACTTTAGTAGTACTATGAATTACGAACAATAAGAGAATAGCTAAGATTTTGTTCCTGGCATCACACTGGATAATGAATGGATTATGAAATATGTGGCATGGTATGCTTAGCAAAGTTATAAAAGGATTTCAATTCCACTTCCACTTCATCGGGTCAAAAAAAGAATATTGAACAAAGCTTAATTATACAGAGGGAAACATATTTTGCCAAACATGCTAATATTAAGATTTGGGTACTTGCAGATGGACAAGGCAGCTTTACTAGGGAGTGTGATAGACCATGTCAAAGATCTAAAGAGAAAAGCCATGGATGTTAGCAGAGCTTTCACAGTTCCAACTGAAATTGATGAAGTATCAATTGACTGTGACCATGTAGAAGATGAAAGCTGCACTAAAGTGAACAAATTGAAGGAGAATATTGTGATCAAAGCTTCTGTTTGCTGCGATGATCGACCAGAACTGTTCCCTGAACTCATCCAAGTCCTCAAGGGCTTGAGACTGACGGCAGTTAAAGCTGACATAGCCAGTGTAGGTGGCCGGATCAAAAGCATATTGGTGCTTTGTTCTAAGGATAGTGAAGAGGGTGTTTGCCTCACCACTCTCAAACAGTCCCTCAAATCTGCTGTCACCAAAATAGCTTCATCATCCATGACATCTAATTGCCCCACCAGAAGTAAGAGGCAGAGATTCTTCTTGCCTTCTCGTTGCCTACAGTAATTTAATTATATATTGTAAAATCATTTTCATTTGCCCCTAAGGGTCATTTCAGTGGGGCAATTATTTGCTTTATTTTTCAATATTTATATACGGATAAGATATATAGCTTTTCCATTAGGAAGATGAAATCATGAAATATTAGTTCTGTGCCACCGATTAAACTAAAGTTAAAGAGTGAGAAACTAAATCAGAGGGAATAATGTGTAAAAGGTTAAGTGCAGAAATCGGCGTGTGGCCTCCTCCTGCATCAGGAATAGAAAAGATGCAAATTGAATTACCTATCATTCAATTAATAGAATGAGTGGATTAGTAAAAGGGTGAATAACGTAGCAAGAGAAAAAGAAAGTAAGAGAACAGAGGAAAAGCAAGCGATCATTGAGTTGCTCGTTAATTCTTAGCAGACAAATGTTAGTGTTAAATCACTTCATGTTTGACTTCAAGAATTAGATGTGATCAATGCATTCAGAAAATATTGGCACGTCCACTCAAGTAGTTTTCATCTCCTCTATCACAACACCAGATATTTCCTTTTGTTAATTAATGAGGCCCATACTGAAAAACTTTCATGTTGTGTAAAAACAATATGATATTTCTTTAAAATGGTTAATGTGCCTTTTTTCTCATTTATCTCTCTAATTCATAATTTTGTTTTGCATGTTTGAAAAATCTAGTTAACAAGCAAACCGGAAGCTGAAAAGCTATGCTTTTGCCATATTGCATTTTAACTGTATTTCTTATAAGCTGATCTAAGAACATTTGTGTTGCGTACATTGTTGAAATAGTAATTTTCAGATCGTGCCATGATGTAATGTGGATGGTTCATGGTTCATGGAATGTTGTCGACCTGAGTTTGCTTGGTATAGCGAACTACCTTTCTTTTCTAACATAGCAGCCGCTGATCAATAAGTGTTTCTTCCACTATCCTAATATTTATTTTCTCACGTGATTTATTATAGAGTGAAAAGGAATCTTTTCGCACAAATTTTCCTTCTTTTTTGTCGAATGATTTGACATTTTATATGAGAGTAACTTAAGAGTGTAAGAAAAAACCAGATTTGTGGAGCCGTGCTTGGTAAGAAAGCCAATCAGTTGGAAGTAGCAATGATGTTTAATGCAGTAAAAAATGGGAAACTTAACAGTAAATACAGCCCACGTTAAACAGCCGCAAAGTGAGAAAATTTTAAAGACAAACACAACTGAGTGGGAGAAAAAGAGGAAAATGCTTTTACCACCAAATGAGGAATGCACGGATGTTGGACCAATTTATAATGGCATCCACGATGTAACGTAGATATTATTTTACGAGAAATGCAAAAAAAAATAACGTTCTTTGAATATCTGTAAAAAAATATATATCTTGAGATGCATAAAAATGTTTTTTTATTCGTTTTAATGCCTTTTTAGATTATCTTAACTAATAAATATTTTCTTCTTTTCTTCTTAACTCCTTAACTATTGCCCGAATAAAAAAAAAAGGCCTTGTTTTTTTTTCCTCTACTGGGTTCAACTGAGTCAAAAAATTCTTGGGTGTTGCTCTCTCCACCACCTTAAGTGTTTTTGCATCTCTCCACTATTTTCTTTTAGGTTTAATGTCTCCGTAGGTCCCTATTTTGGTCATGAATGTCAAATAGGTCCTCTTTCTTTTCGGCGTTTCAATTAAGTCCTTGTTTTTGTAAAATTGAATCAATTACAGGCCTGCCGTTAAATTGGACAAACGGCCGTTACAGTATTGGTTACGTATCTTCGAAGCTTCAGACCATCTCCTCCTTGTCACTCTCCGCTTAAACTCCATTCCCAAAGCCCTCGATTTTATCAATTACCTCAGAAGCAGAACAGAGCACCACCAAGCCCTCTCTTGTGTGTTCGAAGGCGCTCTTGAACTCGCTACGCAGCACCCTAATTCGCAGAAAGAGCTTCTCATGCTTCATAGTTACCGAAAATCCAATGGTGATAACATTGCTCTCACTTCCAGATCTGCTTTCCTCCTTTTGAAGTGCCTAGGGGAGGCCCAAATGGTGGACGATTCGCTTCTTCTGTTCAAGGAGCTCGACCCCTGTTCCAAAAGTTCCGGAATTTGCAACGAATTGCTTAAGGGGTTGTTTAAATCGGGTTGCATTGATGATGCCCTCCAGGTGATTGACGAAATGCTTGAACGGGATTCTGATTTTCCTCCCGATGATTTCACGGGGGAAGTTGTTTTTGGGGTGTTGGGGAAGCAGGAGCGCCATGGAAGAAGCTTTGCTGATAATGAAATTGTGGGGTTGGTTACCAAGCTGTGTGAGCATGGAGTTTTCCCTGATGCGTTTAAGCTTACCCAAATGATAACGAAGATGTGCCGGCACCGGAAGAATGGTGTGGCGTGGGATCTTTTGCATGTTGTGATGAGATTGGGTGGTGCAGTTGCGGTTAAAGCTGCGTCTTGCAATGCTCTGTTAACTGGGTTGGGAAGGGAGAGGGACATTCAGCAGATGAATAAACTGATGGCAGAAATGGAAGAGATGGGGATAAAGCCCAGTGTTGTGACCTTTGGGATTCTTGTTAATCATTTGTGCAAAGCTAGGAGGATTGATGAGGCACTGGAGGTATTTGATAAGTTGAGCGGCAAAGGAGAAGGTAATGATAGGTTTGATGTTGAGCCTGATGTAACGGCGGTTTGTCCAATTTAACGGCAGACTTGTAATTGATTCAATTTTACAAAAACAAGGACTCAATTGAAACGCCGAAAAGAAAGAGGACCTATTTGACATTCATGACCAAAATAGGGACCTACGGAGACATTAAACCTTTCTTTTATTCCATAAATACTCTATATTTTCCCACTATTTTCTTGGCTTAAATTTAAACTTGTGATATATTACAAATATAAGATTCAGAAAAAACATCAATATTAGTGTTTTTACCACTTCAATTTTATAAACTTAAAAGATGCAAATACAAAATAATAAACATAATAATATTAATAGTAAATAATATATCATTATTATTATATAATAACTTTATAATGACGAAAGAACTAAATTAATTTTAAATCTTTAACAAATAACTTTTCTTTTATATTTTAAGTATTTTATAATATCTTTATATTATTTATCTAATAAATTAAATACTTTATTCAAGTTATTTGAGTCTATCAGTAAGTTAAAACATAATATAATGTTAAAAATTATAGATATTAAATGTAAAAAAAATACACATATAAACATTTTTCTAAAAATTTAGAACAAAATTTTACCATTTATTAAGTAATTTGAAGAAAAAAAATATATTAACAGTGAAAATAAGATTGAATCAAACTTATTTAAAGAAAAGTGTAAATAAAATTTTACAATATAGTTTAAATCTGAGCCATGTAAATGCTCTATTAATGTCGAGAGAGAAAGAAAAAGATTATTAAATATAGTGGAGAGACGTAGAGTATTTTTGGAATAAAAGAAAATAGTGGAGAGATTGTAAAGTATTTTTGGAATAAAAGAAAATAGTGGGGAAATGTAAAAACTCTTGTTTGATGGATCCATTTACTCATTCAAAATCTGATCATATATATATATATATAAAGCTTGCATAACTGAGAGATGGCTTTTATAGCTTATTTGCCATGTTCATTCGGCCTGCGTCAACTAGTTAGCTTGATTCGCACATAAAGATATAACATATATATAAAACAACTGGATACATTTATTTCACCACATACCACACTTAAGTTCGCCTTGCAACATTACACCTTATATTCTAATGGATAAAAACATTCAAATGCGTAATTCAATTTTTTAAGAGAATTAAAATTTCTTCGTTCAAACATGTCTTTCTTGAGGTATTTCGATAACTTAATATACAAAAGTATTTAAGATTTACCTAATGGAAAAGCGCGATCGTCCCTCAATATCACTAAATTTGGCCTCTCACTTTAGTGTCCTTGTTTTTCACTTGGCTTACAACAAACCCTTGCTAAACAGAGAAAAAATAGATTGACGTATTGGTCTTACTGGGGACGAAGAGACACTGTCATCTACTACGTTAGCTAAAACGAGCAGAGTCATTATCGAAACTCGTCAATACGAGAGTCCAGGAATAATGATATGATATAATATTATAAAGTTTTTTAAGATTCAGGTTGTTACTCCAATGTTACGTATTTGCTAACCTGTTCAGGATTTAAGTTGTTGCTCTAA