Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21583 LG5 34569099 34571528 PREDICTED: putative serine/threonine-protein kinase-like protein CCR3
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 34569876 upstream_gene_variant
T/A 34569920 stop_gained p.Lys376*
G/C 34569927 synonymous_variant p.Ser373Ser
G/A 34569970 missense_variant p.Ala359Val
C/T 34569971 missense_variant p.Ala359Thr
T/G 34569978 synonymous_variant p.Gly356Gly
C/G 34570037 missense_variant p.Asp337His
C/G 34570047 synonymous_variant p.Val333Val
G/A 34570062 synonymous_variant p.Thr328Thr
C/T 34570070 missense_variant p.Glu326Lys
G/A 34570074 synonymous_variant p.Ala324Ala
G/A 34570075 missense_variant p.Ala324Val
C/T 34570113 synonymous_variant p.Gln311Gln
C/T 34570117 missense_variant p.Arg310His
C/T 34570143 splice_region_variant&intron_variant
C/T 34570155 upstream_gene_variant
C/T 34570227 upstream_gene_variant
G/A 34570293 upstream_gene_variant
A/C 34570368 upstream_gene_variant
G/A 34570511 synonymous_variant p.Leu298Leu
A/G 34570563 missense_variant p.Leu281Pro
C/G 34570568 splice_acceptor_variant&intron_variant
G/T 34570612 upstream_gene_variant
A/G 34570629 upstream_gene_variant
C/T 34570637 upstream_gene_variant
C/T 34570641 upstream_gene_variant
A/T 34570696 missense_variant p.Phe278Tyr
T/C 34570704 synonymous_variant p.Gly275Gly
C/T 34570741 missense_variant p.Gly263Asp
G/A 34570768 missense_variant p.Ser254Leu
C/T 34570803 synonymous_variant p.Ala242Ala
C/T 34570811 missense_variant p.Ala240Thr
G/T 34570813 missense_variant p.Ser239Tyr
A/C 34570814 missense_variant p.Ser239Ala
G/A 34570921 missense_variant p.Ala203Val
G/T 34570954 missense_variant p.Ala192Glu
C/T 34570955 missense_variant p.Ala192Thr
C/T 34570961 missense_variant p.Glu190Lys
C/T 34570965 synonymous_variant p.Arg188Arg
G/A 34570986 synonymous_variant p.Ser181Ser
C/T 34570987 missense_variant p.Ser181Asn
G/T 34570990 missense_variant p.Thr180Asn
G/A 34571001 synonymous_variant p.Cys176Cys
G/T 34571038 missense_variant p.Ser164Tyr
G/A 34571047 missense_variant p.Ser161Phe
C/T 34571081 missense_variant p.Val150Met
G/A 34571083 missense_variant p.Ser149Phe
C/T 34571104 missense_variant p.Gly142Asp
C/T 34571105 missense_variant p.Gly142Ser
A/G 34571114 missense_variant p.Trp139Arg
C/T 34571123 missense_variant p.Ala136Thr
C/A,T 34571124 synonymous_variant p.Thr135Thr
C/G 34571147 missense_variant p.Ala128Pro
G/A 34571148 synonymous_variant p.Cys127Cys
C/A 34571163 synonymous_variant p.Gly122Gly
C/G 34571164 missense_variant p.Gly122Ala
G/T 34571169 synonymous_variant p.Ala120Ala
G/A 34571170 missense_variant p.Ala120Val
C/T 34571172 synonymous_variant p.Leu119Leu
G/C 34571418 synonymous_variant p.Ala37Ala
G/T 34571419 missense_variant p.Ala37Asp
G/A 34571501 missense_variant p.Pro10Ser
G/A 34571518 missense_variant p.Pro4Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21583.1
MKTPPSSSVPLCLVVAALLILSLPRSSHGLGSGATLAVSDASTTVCAVVAGESIRRIQCYRQGQNVYIIPNVSFSMISGGRNYFCGLRSSNSDLICWNTSSSFERRRLYNDSSVPLENLAVGDTHVCATEVGGGTAKCWRTGDTFRLPSVTDTFSSISSGSGFSCGILRNNSRVRCWGDTSVSDLSGRIENAFGNMSMLSLVAGGSHVCGLNSTGFVACGGNNDSGQLDFPQGGAFEYSAVALGAEHGCAIRGSNGSVVCWGGNGGFSGTNVTDGVSFEGLVFNLPVESVVHILILNLYALALTSMIMRRQRSGTSSTKHPDRAEEFTLAELVAATDNFSPENKIGAGSFGVVYKGKLADGREVAIKRGETGSKMKKFQEKEKPDRDHRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKYGEDGGSPLSVVDFAVPRILAGELVKILDARVGPPDVNEAEAVELVAYTAVHCVNLEGKDRPTMADIVVNLERALAICESSHDTISSGSISVVSE*


CDS Sequence:
>Vu_21583.1
ATGAAAACACCACCTTCCTCCTCCGTGCCCCTCTGTCTCGTCGTCGCCGCCCTGCTTATACTCTCTCTGCCACGCTCTTCCCATGGCCTCGGCTCCGGCGCTACCCTTGCCGTCTCTGACGCCTCCACCACCGTGTGCGCCGTCGTGGCAGGCGAGTCCATTCGCCGCATTCAGTGTTACCGTCAGGGGCAGAATGTCTACATCATTCCCAACGTTAGTTTTTCAATGATTTCGGGTGGGAGGAACTACTTCTGTGGTCTAAGGTCAAGTAACTCCGATTTGATTTGTTGGAACACAAGCTCTTCCTTCGAAAGGAGAAGGCTTTACAACGATAGTTCTGTTCCATTGGAGAATCTGGCCGTTGGGGATACCCACGTTTGCGCCACCGAGGTGGGTGGTGGCACGGCCAAGTGCTGGAGAACCGGTGACACGTTTCGGCTTCCTTCTGTGACTGATACATTCTCTTCAATCTCATCTGGGTCTGGCTTCTCTTGCGGAATTTTGAGGAATAATTCACGGGTTCGGTGCTGGGGAGACACCAGCGTTTCGGATTTATCGGGACGGATTGAGAATGCATTTGGGAACATGTCCATGCTGAGTCTTGTCGCAGGTGGTTCACATGTTTGTGGATTGAACTCAACGGGGTTTGTGGCATGTGGAGGAAATAACGATTCTGGACAACTTGATTTTCCTCAAGGTGGGGCTTTTGAGTATTCTGCGGTGGCGCTTGGAGCCGAACATGGCTGTGCTATAAGAGGATCGAATGGTTCGGTTGTGTGTTGGGGTGGCAATGGGGGATTCTCGGGGACTAATGTTACCGATGGAGTTTCCTTTGAGGGTCTTGTGTTCAATCTTCCTGTGGAGAGTGTGGTTCATATCTTGATTCTCAATCTCTATGCTCTGGCTCTGACTTCAATGATAATGAGACGCCAGAGGAGTGGAACGTCATCAACGAAGCACCCAGACAGGGCCGAGGAGTTCACCCTGGCCGAGCTTGTGGCAGCCACCGACAATTTCTCACCAGAAAACAAGATCGGAGCTGGAAGCTTTGGTGTTGTGTACAAAGGAAAACTCGCGGATGGACGCGAGGTGGCAATCAAGAGGGGTGAAACCGGTTCCAAGATGAAGAAGTTTCAAGAGAAGGAAAAACCCGACCGTGATCACCGACCAATGAAGGCAGCAGGAACCGTTGGATACATCGATCCGGAGTACTACGGTTTAAATGTATTGACGGCAAAGAGTGATGTGTACGGGCTGGGAGTTGTACTGCTGGAACTTTTAACAGGAAAGAGAGCTATATTCAAGTATGGGGAAGATGGAGGCAGCCCACTGAGTGTGGTGGACTTTGCAGTGCCTCGTATATTGGCTGGAGAATTGGTGAAAATTTTGGATGCAAGGGTTGGACCACCCGATGTGAACGAGGCAGAGGCAGTGGAATTAGTGGCCTATACAGCTGTCCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACCATGGCTGACATTGTGGTCAATTTAGAGAGAGCTTTGGCTATTTGTGAGAGTAGCCACGATACCATTTCCAGTGGCTCTATCTCTGTTGTTTCAGAATGA


Promoter Sequence:
>Vu_21583::LG5:34571528-34573528(-)
GCAACGGGTCGGGTCGGGCACGGATAGTGCCTACCCGCAACCCGACCCGACAAAAAAAAATCCACCCGCTACCCGACCCGCTACCCACACGGATACCCGCTTAAAAAATATCCGCGGGTATTTTAAAACCCGCGGATACCCGTGGATATCCGCGGATACCCGTGGATATCCGCGGATACCCGCAAATATTAAAAAAATATATATTTTAATAAATTATTAAAATAAAATTTAAATAAAATTATAAAAAATATATAAAATATAATATAAATTAAATTAAATATAAATTTTAATTAAATTTTAATTAAATTTAATATTGTAAAATATAAATTAATGTTAATTTTAATTAAATTTAACTTAATAAAATATAAATTAAATTTTTATTTTTATTTTTTGCGGGTAGCGGGTATCCGCGGGTACGGATAGTATAATATCCGCACCCGACCCGTTTATAAGCGGGTATTAAAATATCCGCTACCCACGGGTTGCGGGTAATAAATATCCGCGGGTATCAACTATCCGTCGCGGATTTTATCCGCGGATATCCGCGGGCGCGGATTTTTTTGCCATCCCTAGGTGTGATACCTATTTGCGACCAAACACTTTAAAGAATCGGTCGTTTAGTTTGACCCTCTCATTCTGAGTCTGGGTCTCCTGTTTGAATTTGAAAGATAATAAAACCATTGCTATTGCTTTAGAATATTCATCTCAGTCAATTTTAATTAAATTAATGATAGATTAAAACAGGAGATTAATTAAATAATTGCGTTTAGGTACCAAATTTGAAAATCCATGCAAGACCTAAATCATCCAAATTAAAACGTAGGATTTAAAAGTAAAATAAAAAAAATAAGATACGGGATTTAAATATAAAATAAAAGAATCAGCAGCCTTTTTTTCCGTTCTATGATTACGGTCAAACTGTGATAATTAAACCCATGTCTTTCACGCTGCTTCTTCCCATTAGAGAGAGACACGTGGACGTCATACCAGTAATATTAAGATTATAAATTTATAACTTAAAAGAATATTTGTAATCTTAATATAGTGTAAACACATTCTTTATTTTTAAGTTATAATATTATAATCTGATAAAACCCAAACAACATAAAGTGTTAAAAATATGTGACACGACAATTATAATTAAAATAAAAATAGAAACTGATGGTAACGACTTGCATTTCACATAACTATAAAACTGACACGTTGCGTTCCTTTCCTCGAAAGTCCTTTTGGCCCTTCTTCGTTCGTTGTTGGTCCCAAAGGCCATGTTTGGTTCAATTATAATCCGACAAACAATTAATTCAATTCGGGGTCACAAACATGATTCTTGAATTTATGGAGTACTTAGATTTAGCTTCAATGTAAAAGTTCTTACCACTACATCATGTAGGTAAGATTCTAAAAGCATTTGGCTATCGTAATATAATTGTATGAACTATTTTTACATTAAATTTAATTTAAAACATTTTACCTTTAGATTATGACACTTTAAAGATTCATTTATATATTTTACCTGTTCTAAAATGAACCAAAACCTTTTTTTTTCAATAATTAAATTATACCTCAGACCCCCAATTTACTGTAAACTAACGTTATTAATAATAAACAAGCTCTGTGATTTTGCACACGTAATAATGATCTCTAAATAGCTGTAAATGTAATAAATCGGCGTAATTTTTTCTTCTTCTAAATTTTAATTTTTAGGTTCTTATATATATAGAATTTGTAGTAGAAAAAAAGTAGAGAAAAAAAAATGAATAAAGGCTTTATTAATTATAAAGCCAAACAGGACTCAAGGAAAAAAACGAAAAGGAGTAGAGAGATTGAACACGAAGAAGAGAAGAAATGTCTTTGCAATATTACAGATTCAAGAGTCCACAACTACTCCCTCAAAGTTCCCACCATATACCTTCTTCTTCTTCTTCCTTCTTCTCGTAAACCAAACCAACTCTGCCAATGAAGCAGAAAAATCAACTTTGCATAATTTTCCATTCTTTTAA


Gene Sequence:
>Vu_21583(-)
ATGAAAACACCACCTTCCTCCTCCGTGCCCCTCTGTCTCGTCGTCGCCGCCCTGCTTATACTCTCTCTGCCACGCTCTTCCCATGGCCTCGGCTCCGGCGCTACCCTTGCCGTCTCTGACGCCTCCACCACCGTGTGCGCCGTCGTGGCAGGCGAGTCCATTCGCCGCATTCAGTGTTACCGTCAGGGGCAGAATGTCTACATCATTCCCAACGTTAGTTTTTCAATGATTTCGGGTGGGAGGAACTACTTCTGTGGTCTAAGGTCAAGTAACTCCGATTTGATTTGTTGGAACACAAGCTCTTCCTTCGAAAGGAGAAGGCTTTACAACGATAGTTCTGTTCCATTGGAGAATCTGGCCGTTGGGGATACCCACGTTTGCGCCACCGAGGTGGGTGGTGGCACGGCCAAGTGCTGGAGAACCGGTGACACGTTTCGGCTTCCTTCTGTGACTGATACATTCTCTTCAATCTCATCTGGGTCTGGCTTCTCTTGCGGAATTTTGAGGAATAATTCACGGGTTCGGTGCTGGGGAGACACCAGCGTTTCGGATTTATCGGGACGGATTGAGAATGCATTTGGGAACATGTCCATGCTGAGTCTTGTCGCAGGTGGTTCACATGTTTGTGGATTGAACTCAACGGGGTTTGTGGCATGTGGAGGAAATAACGATTCTGGACAACTTGATTTTCCTCAAGGTGGGGCTTTTGAGTATTCTGCGGTGGCGCTTGGAGCCGAACATGGCTGTGCTATAAGAGGATCGAATGGTTCGGTTGTGTGTTGGGGTGGCAATGGGGGATTCTCGGGGACTAATGTTACCGATGGAGTTTCCTTTGAGGTAATTGTTTCTGGGTCTAATTTTGTTTGTGGATTGACAACAAACAATTTGACAGTGGTGTGTTGGGGTCCTGGTTGGTCTAATAGTTCGACGTTTGAGCTTCCTTTTCCACCTGTTCTTCCAGGGTCTTGTGTTCAATCTTCCTGTGGAGAGTGTGGTTCATATCTTGATTCTCAATCTCTATGCTCTGGCTCTGGTAACATTTGTAAACCAATGACTTGTAAGCCTCAAACAACAGCTCCACCGCCGCCATCACCGTCACCGCCTCCACCATCAATGTCACCGCCGCCACCATCACCACCACCGCCACCACCTTCGTCAACTCGATCAAAGACCTTGACAAACGGGTTATTGGCATTTGCTATTATCGGTTCTGTGGGAGCTTTTGCTGGAATATGCACTATAGTTTATTGCTTGTGGAGTGGAGTTTGTTTTGGGAAGAAGAAAGTTCACAATTCTGTGCAGCCTACAATCACAAGAGGTAGCAGTGGTTCAAACGGTGGGGGTGCTTCTAATAATAGCAATTCTTCAATATCGTCTATGATTATGCGTCAGACTTCAATGATAATGAGACGCCAGAGGAGTGGAACGTCATCAACGAAGCACCCAGACAGGGCCGAGGAGTTCACCCTGGCCGAGCTTGTGGCAGCCACCGACAATTTCTCACCAGAAAACAAGATCGGAGCTGGAAGCTTTGGTGTTGTGTACAAAGGAAAACTCGCGGATGGACGCGAGGTGGCAATCAAGAGGGGTGAAACCGGTTCCAAGATGAAGAAGTTTCAAGAGAAGGAAAGTGCATTCGAGTCTGAATTGGCTTTCTTGTCTCGCCTACACCACAAGCACTTGGTTGGACTGGTCGGGTTCTGCGAAGAGAAAGATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGGGCGCTGTATGATCATTTGCATGACAAGAACAACGTGGAGAAGGGTAACAGTGTGTTGAATTATTGGAAAATGAGGATAAAAATTGCTTTGGATGCTGCCCGGGGAATAGAGTATCTTCATAATTATGCAGTTCCATCAATTATTCACAGAGACATAAAGTCTTCTAACATTCTTATTGATGCTACTTGGACGGCAAGAGTATCAGATTTTGGATTGTCTATGATGAGTCCAGAACCCGACCGTGATCACCGACCAATGAAGGCAGCAGGAACCGTTGGATACATCGATCCGGAGTACTACGGTTTAAATGTATTGACGGCAAAGAGTGATGTGTACGGGCTGGGAGTTGTACTGCTGGAACTTTTAACAGGAAAGAGAGCTATATTCAAGTATGGGGAAGATGGAGGCAGCCCACTGAGTGTGGTGGACTTTGCAGTGCCTCGTATATTGGCTGGAGAATTGGTGAAAATTTTGGATGCAAGGGTTGGACCACCCGATGTGAACGAGGCAGAGGCAGTGGAATTAGTGGCCTATACAGCTGTCCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACCATGGCTGACATTGTGGTCAATTTAGAGAGAGCTTTGGCTATTTGTGAGAGTAGCCACGATACCATTTCCAGTGGCTCTATCTCTGTTGTTTCAGAATGA