Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21499 LG5 33727826 33729844 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 33727958 synonymous_variant p.Pro629Pro
G/C 33727959 missense_variant p.Pro629Arg
C/T 33728001 missense_variant p.Ser615Asn
A/G 33728030 synonymous_variant p.Cys605Cys
C/T,* 33728040 missense_variant p.Gly602Glu
C/T 33728041 missense_variant p.Gly602Arg
C/T 33728051 synonymous_variant p.Val598Val
C/T 33728053 missense_variant p.Val598Met
C/T 33728065 missense_variant p.Glu594Lys
C/T 33728078 synonymous_variant p.Ala589Ala
G/A 33728079 missense_variant p.Ala589Val
C/T 33728083 missense_variant p.Gly588Arg
G/A 33728094 missense_variant p.Pro584Leu
G/A 33728096 synonymous_variant p.Asp583Asp
C/T,* 33728099 synonymous_variant p.Val582Val
C/A,T 33728108 synonymous_variant p.Leu579Leu
A/T 33728109 missense_variant p.Leu579Gln
G/A 33728110 synonymous_variant p.Leu579Leu
G/A 33728138 synonymous_variant p.Val569Val
T/C 33728145 missense_variant p.Asp567Gly
C/T 33728150 synonymous_variant p.Leu565Leu
G/C 33728152 missense_variant p.Leu565Val
C/G 33728159 missense_variant p.Glu562Asp
G/A 33728166 missense_variant p.Pro560Leu
C/T 33728216 synonymous_variant p.Leu543Leu
G/A 33728225 synonymous_variant p.Phe540Phe
C/G 33728230 missense_variant p.Ala539Pro
A/T 33728234 synonymous_variant p.Val537Val
G/A 33728241 missense_variant p.Ser535Phe
C/G 33728244 missense_variant p.Ser534Thr
C/T 33728258 synonymous_variant p.Gly529Gly
A/G 33728287 missense_variant p.Tyr520His
G/A 33728310 missense_variant p.Thr512Ile
T/A 33728432 missense_variant p.Glu471Asp
T/A 33728645 synonymous_variant p.Ser400Ser
A/G 33728649 missense_variant p.Val399Ala
G/T 33728942 synonymous_variant p.Leu301Leu
T/C 33729000 missense_variant p.His282Arg
C/T 33729092 synonymous_variant p.Gly251Gly
C/T 33729301 missense_variant p.Val182Ile
G/A 33729461 synonymous_variant p.Tyr128Tyr
G/T 33729584 synonymous_variant p.Thr87Thr
C/A 33729816 missense_variant p.Gly10Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21499.1
MAKTRTFLLGLPLCVLTLLLVTNTAKCQEFFFNGFDGASATNIALNGGAVIEHKGLLRLTNNTQRVIGHAFYPTPIQFKHNNKSSSTDPKLFSFSTAFAFAIIPQYPKLGGHGFAFTISRSRSLSDAYPSQYLGLLNPKELGNFSNHLFAVEFDTVQDFEFEDINDNHVGVNLNNMVSNKSVEAAFFPEDSTNKQNLSLKSGKVTQAWVDYDSSTNQLEVRLSPTSSKPTSPILKYKVDLSPILQDSMYVGFSSSTGLLASTHYILGWSFKINGEAKTLSLHKLPSLSASNKTQKRLKLGLSLLLVLTLATISLGCYLFRRMKNTEVIEAWERDVVGPHRFPYKELHKATKGFKDKNFLGFGGSGRVYKGVLPKSHKEIAVKRISHESKQRMQEFVSEVSTIGRLRHRNLVQLLGWCRKQNDLLLVYDFMRNGSLDRYLFGQPRKILTWEERFKIIKGVGLGLVYLHEEWEQTVIHRDVKAGNVLLDSDMNGRLGDFGLAKLYEHGAKPSTTRVVGTMGYLAPELTRTGKPTTSSDVYAFGALLLEVVCGRRPIEVKALPEELVLVDWVWERWRMGAPLAVVDPRLGGAFDEVEVLVVIKVGLYCSAEAPEKRPSMRQVVRYLEREVAPPPPVVYGKKEDGGGGYYEELHSYSPWSSVGDDVASSLSLSGGR*


CDS Sequence:
>Vu_21499.1
ATGGCCAAAACCAGAACATTTCTGCTTGGGCTTCCTCTCTGTGTTTTGACCCTTCTTCTGGTCACAAACACTGCAAAGTGTCAAGAGTTTTTCTTCAACGGATTTGATGGTGCTTCTGCCACCAACATCGCCTTAAACGGAGGAGCAGTGATTGAGCACAAGGGCTTGCTTCGTTTAACAAACAACACTCAGAGAGTAATTGGGCACGCGTTTTATCCAACCCCAATTCAGTTCAAGCACAACAACAAAAGCTCTTCCACCGACCCAAAACTTTTTTCCTTTTCCACTGCTTTTGCGTTTGCAATCATCCCTCAGTACCCAAAACTCGGTGGCCACGGTTTTGCCTTCACCATTTCGCGCTCCAGGTCGCTGTCGGATGCATACCCGAGTCAGTATTTGGGCCTCCTCAACCCAAAAGAATTGGGGAATTTCTCAAACCACCTTTTCGCAGTGGAGTTCGATACCGTCCAAGACTTCGAGTTCGAGGACATCAATGACAACCATGTTGGTGTCAACCTCAACAACATGGTATCCAACAAATCCGTTGAAGCTGCGTTTTTCCCTGAGGATTCAACCAATAAGCAAAACCTGAGTTTGAAGAGTGGTAAAGTGACACAAGCATGGGTTGATTATGATTCATCAACGAACCAATTGGAGGTTAGACTCTCCCCAACTTCCTCCAAACCCACTTCCCCAATTTTAAAATACAAAGTAGATCTGTCACCAATTCTCCAAGATTCCATGTACGTGGGGTTCTCTTCTTCGACAGGGTTACTCGCAAGCACACACTATATTTTGGGTTGGAGCTTCAAAATAAACGGAGAGGCCAAAACCCTCTCACTGCACAAGCTCCCATCTCTCTCTGCCTCCAACAAAACTCAAAAGCGCTTAAAATTAGGACTCTCCCTTTTATTGGTTCTAACACTCGCCACAATTTCTCTGGGGTGTTACCTATTCAGAAGAATGAAGAACACCGAAGTAATCGAAGCTTGGGAGAGGGACGTTGTTGGGCCACACAGATTCCCATACAAAGAGCTACACAAAGCTACGAAGGGTTTCAAAGACAAGAACTTCCTGGGGTTCGGAGGGTCCGGTCGCGTCTACAAAGGGGTTCTCCCGAAGTCCCACAAGGAAATCGCCGTGAAGCGAATCTCGCACGAATCGAAACAACGTATGCAGGAGTTTGTGTCAGAAGTATCAACCATAGGAAGACTCCGACACAGAAACCTGGTACAGCTACTAGGTTGGTGTCGGAAACAAAACGACCTTTTACTTGTGTACGATTTCATGAGAAATGGAAGCTTGGACAGATACTTGTTCGGTCAACCGAGGAAAATACTAACGTGGGAGGAAAGGTTTAAGATAATAAAGGGAGTGGGTTTGGGGTTGGTGTATTTGCATGAGGAGTGGGAACAAACGGTGATTCACAGAGACGTCAAAGCGGGGAACGTTTTGTTGGATAGTGACATGAATGGGAGGTTGGGGGATTTTGGGTTGGCCAAGCTTTACGAGCATGGTGCCAAGCCTAGCACCACACGTGTGGTGGGAACGATGGGGTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCTTTCGGAGCGTTGTTGTTGGAGGTGGTGTGCGGGAGGAGGCCCATTGAGGTGAAGGCATTGCCGGAGGAGCTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACCCCAGGTTGGGTGGGGCGTTTGATGAGGTGGAAGTTTTGGTAGTGATTAAAGTGGGGTTGTACTGTTCCGCGGAGGCACCAGAGAAGAGGCCCAGCATGAGGCAGGTGGTGAGGTATTTGGAGAGGGAGGTGGCGCCGCCTCCGCCGGTGGTTTACGGGAAAAAAGAAGATGGTGGTGGTGGCTACTACGAGGAGTTACATTCGTATTCGCCGTGGTCGTCGGTGGGTGATGACGTGGCGTCGTCTCTTTCACTTTCCGGTGGCCGGTAA


Promoter Sequence:
>Vu_21499::LG5:33729844-33731844(-)
AGCACTAGTGATGTGTGACTTTCTCATTATTTGTGTCTATGCAATTAGAGGAAAAAGAAATGGAAAAGGTAGACATTTTTTTATTGAAGTATTCACTTTTTGTTTGGGATGAGAAATGTGAAACAAAACGGTATTTTCGGGATTCATGAAAGGAAAATCTCTCCTTCCCTTCAATTGGCATGTAACAAGGAGGGGTGATTGATATATTTTTTCTTCATTTTTTGTTTAAAAGGTTCAATCACATTATACATGATAAATTGAAAAATAATATATATTTTAATGATAAGAGAAAATAATAAAATAAATAATTAGGTTTAAACTAATTTTTAATTAATGTACGAATATTTTCATTATTTATTAATTTTTACTCATTTGCATAAGTGAGAGACAATTTTTAACAATTTTATTTTTATTCTCCATTTTTTAGTTTTACTCTTTCTCTATTTCATTTATGACGTGAAGGAGCATTAGAGCAAGCACTAAAATTTGAGTGGAGGTAGTCAAATTTGCCACGAATAGACAAGACGTGCAATTTGACACAACTATATCTGGGTAGGAATTTGGATTGGTCCAGTACACATTAAAAGATGCTTTTCATAATTACATGCTACTGTAATTTTACCAACACACATCTTTATAAAACAAGTAATATGAGTTTACTCTATAAGTTAATTCATAAAAAAAATGTACATATTGGTATAATTTGATTATTAGAATTAAATTTGATTGATTTGAATTAAATCAACTTAAAAAAAACCCAGAAATTAGTTTTTTTTCAACTTTTAGTTCAAATTTGTGTTATATATCTTTTCTGTATCAGATAAATTCAAAACATCTGACTTTTTAAAGTGAAAAGTATACCTTAAAAGATAAAATATGATTTATAATATCACTAAGCTTATAAACTAATTAATCTGGAAAATGCATAAACTATCTTGTCCAGAATTGTTCAAATCTTTTGGATATACAATTGTACTAAATACTCCAAAAAAATAATTTCATTACTCAAAATTATTTTATTTGAATAGGATTACTTTTCGTCAAAGATACTTATTATCCATATTAAAAATACCATAATAAAAAATTAATGATTGAAATCTAAATCAGAACACAACTTGACCTTCATAAATGAGTAATTCCATTTAAATTTGATAATCACAAACCTTTTGAAAGAACATGTAATTACCATACCAATGTTGACCTGTTTGTACTTCAACTCCAACCCACAGATATATCACCTATAAGTCGGTTTCCCAAATTGGCAAACAAGTAAAATTGGTGTAAAGCCAAACCTAAGTACACCACTCTATTATTTTGTTGTGTTACCTGCATGTTCTGACTTTCATGGTGTCGCTTACACCAGAAGACAAGCCCCGGAAAATGACAACTTTCTTTGCTGAGTTGGAGAGGCTCCATGTTTAATTATATCTAATATTCTGAAACATATATAATCAGAATCAAACTCTTGCATATCAAATTATAAATCATGATATTAAGCTAACCAACTTTCTTTTATATTATTCAATACAACTATAATTTAAAAATTAAGGAAACCAAGAGATAAAGTTCTGATCCATGGAAGTTGTAAAGCAAAACAATTGACAACAAATATTCACATGCTATCCACGTTCAGCTAGACTACTTATTAACAAATTCATGGTGGATAACACATTTTATGGGAAAGGGACCATAAGAGGAGATGGCAACACATAAAATAAATTGTATAAAGCTGATACAGAAAAAAAAAATGAAGTGGAAGTGGGCGATGATGATATTCAAAATGGTAAAGCTGTGTTAAGTCACAATCTGTGGTAAACACCAAACATGTGAGAGAAATCAATCAAACAAGTAATAACCACGTTTCAGTTTACAATCCACACACTCTTGAATAGCACATCACAGCAGAACGCACTATTAATTTGAGTTTACCTAATGAGTTATACAAACAATATGAACTATGTAACATGTGTGTACAGTTTTTTTGGTTGCTCTGCCTCGTG


Gene Sequence:
>Vu_21499(-)
ATGGCCAAAACCAGAACATTTCTGCTTGGGCTTCCTCTCTGTGTTTTGACCCTTCTTCTGGTCACAAACACTGCAAAGTGTCAAGAGTTTTTCTTCAACGGATTTGATGGTGCTTCTGCCACCAACATCGCCTTAAACGGAGGAGCAGTGATTGAGCACAAGGGCTTGCTTCGTTTAACAAACAACACTCAGAGAGTAATTGGGCACGCGTTTTATCCAACCCCAATTCAGTTCAAGCACAACAACAAAAGCTCTTCCACCGACCCAAAACTTTTTTCCTTTTCCACTGCTTTTGCGTTTGCAATCATCCCTCAGTACCCAAAACTCGGTGGCCACGGTTTTGCCTTCACCATTTCGCGCTCCAGGTCGCTGTCGGATGCATACCCGAGTCAGTATTTGGGCCTCCTCAACCCAAAAGAATTGGGGAATTTCTCAAACCACCTTTTCGCAGTGGAGTTCGATACCGTCCAAGACTTCGAGTTCGAGGACATCAATGACAACCATGTTGGTGTCAACCTCAACAACATGGTATCCAACAAATCCGTTGAAGCTGCGTTTTTCCCTGAGGATTCAACCAATAAGCAAAACCTGAGTTTGAAGAGTGGTAAAGTGACACAAGCATGGGTTGATTATGATTCATCAACGAACCAATTGGAGGTTAGACTCTCCCCAACTTCCTCCAAACCCACTTCCCCAATTTTAAAATACAAAGTAGATCTGTCACCAATTCTCCAAGATTCCATGTACGTGGGGTTCTCTTCTTCGACAGGGTTACTCGCAAGCACACACTATATTTTGGGTTGGAGCTTCAAAATAAACGGAGAGGCCAAAACCCTCTCACTGCACAAGCTCCCATCTCTCTCTGCCTCCAACAAAACTCAAAAGCGCTTAAAATTAGGACTCTCCCTTTTATTGGTTCTAACACTCGCCACAATTTCTCTGGGGTGTTACCTATTCAGAAGAATGAAGAACACCGAAGTAATCGAAGCTTGGGAGAGGGACGTTGTTGGGCCACACAGATTCCCATACAAAGAGCTACACAAAGCTACGAAGGGTTTCAAAGACAAGAACTTCCTGGGGTTCGGAGGGTCCGGTCGCGTCTACAAAGGGGTTCTCCCGAAGTCCCACAAGGAAATCGCCGTGAAGCGAATCTCGCACGAATCGAAACAACGTATGCAGGAGTTTGTGTCAGAAGTATCAACCATAGGAAGACTCCGACACAGAAACCTGGTACAGCTACTAGGTTGGTGTCGGAAACAAAACGACCTTTTACTTGTGTACGATTTCATGAGAAATGGAAGCTTGGACAGATACTTGTTCGGTCAACCGAGGAAAATACTAACGTGGGAGGAAAGGTTTAAGATAATAAAGGGAGTGGGTTTGGGGTTGGTGTATTTGCATGAGGAGTGGGAACAAACGGTGATTCACAGAGACGTCAAAGCGGGGAACGTTTTGTTGGATAGTGACATGAATGGGAGGTTGGGGGATTTTGGGTTGGCCAAGCTTTACGAGCATGGTGCCAAGCCTAGCACCACACGTGTGGTGGGAACGATGGGGTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCTTTCGGAGCGTTGTTGTTGGAGGTGGTGTGCGGGAGGAGGCCCATTGAGGTGAAGGCATTGCCGGAGGAGCTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACCCCAGGTTGGGTGGGGCGTTTGATGAGGTGGAAGTTTTGGTAGTGATTAAAGTGGGGTTGTACTGTTCCGCGGAGGCACCAGAGAAGAGGCCCAGCATGAGGCAGGTGGTGAGGTATTTGGAGAGGGAGGTGGCGCCGCCTCCGCCGGTGGTTTACGGGAAAAAAGAAGATGGTGGTGGTGGCTACTACGAGGAGTTACATTCGTATTCGCCGTGGTCGTCGGTGGGTGATGACGTGGCGTCGTCTCTTTCACTTTCCGGTGGCCGGTAA