Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21369 LG5 32424852 32427690 PREDICTED: G patch domain-containing protein 8
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   nucleic acid binding
SNP Position Effect Amino acid change
A/G 32424863 synonymous_variant p.Arg4Arg
G/A 32424888 missense_variant p.Gly13Ser
G/A 32424895 missense_variant p.Arg15His
C/T 32424899 synonymous_variant p.Asp16Asp
T/A 32425077 downstream_gene_variant
C/T 32425088 downstream_gene_variant
A/T 32425152 downstream_gene_variant
A/T 32425267 downstream_gene_variant
C/T 32425388 downstream_gene_variant
C/G 32425421 missense_variant p.Gln27Glu
C/G 32425732 downstream_gene_variant
T/C 32425737 downstream_gene_variant
G/T 32425876 downstream_gene_variant
G/A 32425898 downstream_gene_variant
A/G 32425937 downstream_gene_variant
A/T 32425987 downstream_gene_variant
G/C 32426201 downstream_gene_variant
G/A 32426206 downstream_gene_variant
A/T 32426207 downstream_gene_variant
A/C 32426384 synonymous_variant p.Ala108Ala
A/T 32426391 stop_gained p.Arg111*
G/T 32426458 missense_variant p.Arg133Ile
G/A 32426579 downstream_gene_variant
T/C 32426889 downstream_gene_variant
T/C 32427170 downstream_gene_variant
C/T 32427178 downstream_gene_variant
C/G 32427201 downstream_gene_variant
G/A 32427261 missense_variant p.Cys234Tyr
T/C 32427427 downstream_gene_variant
C/G 32427436 downstream_gene_variant
G/C 32427583 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21369.1
MDYRWTNGRLDTGGRDRRQSKREQAYQDSLVEDLSEDFRLPINHRPTENVDLDNVEQASLDTHLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGGSRDDRQKREQQRQEKEMAKFAQIADAQKQQRLQLQQDSGSGTVSSESRTATALTDQEQRNTLKFGFSSKGSGSKITFGAKKQNVAKKQSAPPISSIFSNDSDEE*


CDS Sequence:
>Vu_21369.1
ATGGACTATCGATGGACTAATGGTAGGCTGGATACAGGTGGCCGTGACAGGAGGCAATCTAAAAGGGAACAGGCATATCAGGACTCTCTTGTTGAGGATTTGTCAGAAGACTTCCGCTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTCTGGACACACACTTAACATCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATCACCGAGCCAATTAAATCTGGGATTAGAGATCCAAGACTTGGAGTTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAATTGGAAGAGACAGAAGAACATGTGAAGAAGCGGGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCTATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGATTCAAACAAATGAAGGAAATGCATGGTGGTGGTAGTCGAGATGATAGGCAAAAGCGAGAACAACAGCGTCAAGAGAAAGAAATGGCAAAGTTTGCTCAAATTGCTGATGCTCAAAAGCAGCAACGCCTTCAATTGCAACAAGATTCTGGATCAGGAACAGTGTCCTCCGAATCTAGAACTGCCACTGCTCTTACAGATCAGGAGCAGAGAAATACTTTGAAATTTGGGTTTTCGTCTAAAGGCAGTGGTTCCAAGATAACTTTTGGTGCCAAGAAACAAAATGTTGCGAAGAAGCAAAGTGCCCCCCCGATCTCCTCTATATTTAGTAATGATAGCGATGAAGAATAA


Promoter Sequence:
>Vu_21369::LG5:32422852-32424852(+)
GATATCGAGATCTGTTAAAGGCTCAATGTCCCATATCCATTGGAGCCTTTGATATTTCTCTTCTTCTTTATTTAACACATAACAGAGACGCATATGGAATCATTAACATGGATCAGAGATAACAACAAAGGAAGCATCAAACTCCATAGCACCATGAAGCCACCATGAATCAAGCAACAGAACGAACCTACCACCAACCAAGCACCAACACGAACCAAGCAAAGAAGAAGAGAACCCTGACGAAAATGGTAAATTGGAAAAAGAGGAAGATGGAAAATTGGGAAAAGAGGAAGATGAGAAATTGGGAAAAGAGAAATAAGAGAATAAGAGAGGAAGAGAGAAAGTAAGAGTCTGGAGGTGAGGGTATGGTGTGCAACCGAGTGAATAAGAGAGTAAAAAAATAAGGTTTAAAGAAAAAGTTAAAAAAGTAAAAAGTAACAGTAAATAAGAGTATTTTTAAAATTAAAAAAAGTTAGAGAGGTGTATCGAACAGTGTGTGTGTGGTGGTGGAGGGAGTAACACTCTTCTCATTTTCCTCTTCTTTATCGGCCCAAGCCCCAAACACAGAAAACGGATCTCAAGACACTTTGGGTGTTGCTCCCTCCACTACCACCCTATACTTCCTCCACCTCCCCACATTATTTTAAATACAATTATATCCTTAAATTAAAAAGATTTTTACTTTTACCCTATTTTAAATAATTTGAAACCCTAATTTTATTTTTCCAGCACTCACCCACGAAACTCTCTTCCCCTTTCCCCATTTTCGTTTCACCTCCCCACCTCCCGCACTTCCATTCCTTTTTCTTCCCAGTTTTTTTTTTGTTTGAAAGCTTCCATTTCCGTCGTGGTGTGAAGGAGTGTCGCCGCCGTGGTGTGGAGGAACGTCGAGGAGCGTCCAGAGCATCAACCAGCGTGAGGAAGTATACATCGGAGCTGACATCCTTCAACGGATGTCAACATCCGTTTAAGGTAAAACGGATGTCGATATCCGTTTTTCCTTAAACCGATGTTGACATCTATTGAAGGATGTTGACATCCGTTGATGGATGTCACCTCCGTTTAAAGGTTACGTTTTTTTATTTTAGGGTTTTATTTCAAGGTTTATTCGAATACAAGGCACCACTCCACGCACTGCACCACGAGAGCGACACTGCACCACGAGAGCGACACTGCACCACGAGAGGAGACTGCTTGATAATTCTTTCCACAACCACCAACCTTTACAACTTGTAGTATCTCACAACGACGAAAGAAAGAGAGGAAGAAATATAATGTTAAAATGAAAGAAAAACATTTTACTCGGGACTAGAATAGATTATTAGTAAAATAGGTTGTGAATGAGTAAAATTAAAAAATAATAACTCTAAAATAAAATTTTACTAAAAGACAAAATAGTAAAAAGGAGGTGAAAGAGAAAGGTGTGGTGGTGGAGGGAGACACTTTTCAGGTTTAGCCCAAAATTGAATGTAACCAGCCCAATGTCCAATCCTTAAATATCCACCATTCGTGTTCTTTTTCTCTCTTATTTTTTCCATTTTTTTTCCTTTTAATATTAAAATATCTATATTTTTGCTTTCAACTTGATCCTGTTTCTTTCCCTCATCTCATCAAATCTGAATATATCAAGCCCATGACCCTGCGTTGAAATCTAACCAGGACGACAACCAAGCAACGTTTTTTCCCCCAGGGTATACTCTCTTCTTCCTATCATCAAGGTTTTGTACTTTCTTATACAATAATATTTCCCAATCGTGGTTTTGTTCTTAGATTATTTAAGCCAGGGTTTTCTGGATCTGATTACAATGTTAATTCCTAACAGTTTTCCTTGTTTTGTTTTAGTTAAATTTCAACAAGGTAGTATATTTTTTTCCTAAGTGGGTTCATGTTGTGTTTTCTCCTTTCAGCTCATTTTTCCACCTTTGATTTAGTAAACAGTGCACCCACTCTCCCTGTGACTGTCTTTACCTGTGATTATTGTTTCTTGTGTAGATCCAAAA


Gene Sequence:
>Vu_21369(+)
ATGGACTATCGATGGACTAATGGTAGGCTGGATACAGGTGGCCGTGACAGGAGGCAATCTAAAAGGGAACAGGTAATTGATGTCCCCCATCTCCTCAATTGAGTCGTGTGCGTGCTTACATTAAGGTTTTTGAGATTTAAATTTTGAAAAGTTAAACCTATCTCTGTAGTTGTAGTGAAAATAATTATGAAGACCAGAATTTAGAAGATAAGGATTGCTGATTCCTATCTGCGAAACTTTTGTTGCCATTTACTTGTGTGTTTTGTTCAAGACACTAATATTCTTTTTTTTTTGCTAATTATGAATCAATTCCTTTTTAATATTTTTTTATCATTTTTTAGAATTTATATATAGCATACCAAAGTATATAAAATTTTTAAAAATAGCAGCTATCTTGCTATCTACTTTCCTGCTAAAGCATTTTTTGTGGCTGGGTGTTATCTGGGATTTAAAACATTGTGTATTGTGTTTATACTCGATGAATATGATATTGTGTCTTTGAGACATGTTAGATGTGCAACTATTACTGTGATTTCCAGTGTATTGAGATGAATATTTTTCAGGCATATCAGGACTCTCTTGTTGAGGATTTGTCAGAAGACTTCCGCTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTCTGGACACACACTTAACATCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGTTTATACTATATTATTACTTTCTTTGATTTTAACAATTTGTTACTCTGTTTATGAATATTTGTACAATGCATTTACCCATTGTCTTAGCTTCTGCTGTGCTGCAAAATTTTTCCCTTCTCCTTGGTTCATCTTGAATGTCTCCCCTTACCCCTCTGAGTGTACCTCCTTCATAGTGTTGTTAGGACATGCCTTTTATGTTTATTTTTTCCCTTTCTTCTCTATTCCTCTGGAGTGGTTGGAATGAAAGCAAAACTCTGATTTTTGGTCTTTACTGCTGCTTAATTCGGTCATTCAATAAATGAACACCTAGTGCTAATTTGTTCTAAGCATAGAAAGGATTGCTGTAATTTTTTTTATTTTATTCCAGCATTTAAATTGATTTTCTGTTTGTATACAATTACATCTTTGCTAATAAGACCTTCAGCACCCTTGTTAATGCTATGCAAAGTGCTATTTGCACAAGCTTTTTATTTTTCCTTCTGGGTGAAAAGTTGTATTTTTCTCTGGTTCAGGCTAAATTGCTTAATTTATTGAATGCACTTGCTTCTGATTCAAACAAGGATTTTGGAAATGAGTCATTTTTTTTAAGTATTGATTTTATAATGTAATGTTCCGGATTGAGGGGATGCTTAAGCTGAAAGTGATGTGATTTTAGTGTGTCCTTTATTTTAAAGGCTTTATCTTATTTTTCAAATTGACGTGGCATGTGTGCAGGAATCACCGAGCCAATTAAATCTGGGATTAGAGATCCAAGACTTGGAGTTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAATTGGAAGAGACAGAAGAACATGTGAAGAAGCGGGAGGTATGATTTATCATTCCTTAGTAGTTGGTCTTAGTGCAAAACCCACATAGTAGTATCGAGTTGATGTTTATATTTTCTCAAACCTGCACCCCTCATAGCAGAAGGCTGCATATAGCATATATGCATGTCTTTTGACCGGATTGGTATGTCATAAGGAACCATCAAGTTTGGAAGGTCTTGAGAATTTCCTGCAGTTTTTATTACCTGGTGGCTTCTTCTGCCTGCTTCGTGCACATTATGAAAATTCAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCTATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGGTAAGCAGTTTAACTAACAGTAACTTGGCTCTGCTTTTGTTAATTTGATTTCCAAATTGGCTCATTTTTTCTCTCGTAATACTAAATCCTTGTTAACTACAGCGATTCAAACAAATGAAGGAAATGCATGGTGGTGGTAGTCGAGATGATAGGCAAAAGCGAGAACAACAGCGTCAAGAGAAAGAAATGGCAAAGTTTGCTCAAATGTATCCATTTGCTCCTAAGTCCATTTATTTTTATTCCCTTTCTTCCCTTGTTTTTATTATGGGTGGGTGGCCAGGGGGTCAATATTCTATTTTTTATCGACTTTCTGTTGTGTCATCTTGCTTTTTGGTTTCCTTAATGTCTATCAGTGCTGATGCTCAAAAGCAGCAACGCCTTCAATTGCAACAAGATTCTGGATCAGGAACAGTGTCCTCCGAATCTAGAACTGCCACTGCTCTTACAGATCAGGAGCAGAGAAATACTTTGAAATTTGGGTTTTCGTCTAAAGGCAGTGGTTCCAAGGTATGTCCAGCTGGTGTCTAGGGTATGAAAAAAAAAACAAAATTGTCCTTAGTACTTGGAAATTTGGAGTGCTTACAGTTTTTATACATCTCATTGTCAAGTTCTTGATAATGTTTTGTTCAAATTCAAGTCTTGCACACTTTCAACCCTGACAATCCATTTAGTGTTTCTTTTGCATGCTAATAATATCTTTTTCTTTTCGAAAATGTCTGACAGATAACTTTTGGTGCCAAGAAACAAAATGTTGCGAAGAAGCAAAGTGCCCCCCCGATCTCCTCTATATTTAGTAATGATAGCGATGAAGAATAA