Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21333 LG5 32061749 32066894 PREDICTED: probable WRKY transcription factor 47
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 32062010 missense_variant p.Gln500Leu
C/G 32062028 missense_variant p.Gly494Ala
A/G 32062033 synonymous_variant p.Thr492Thr
C/A 32062258 synonymous_variant p.Thr417Thr
G/A 32062279 synonymous_variant p.Arg410Arg
G/A,T 32062297 missense_variant p.Asn404Lys
G/A 32062318 synonymous_variant p.Leu397Leu
C/T 32062378 synonymous_variant p.Ser377Ser
C/T 32062393 synonymous_variant p.Ala372Ala
T/C 32062412 missense_variant p.Glu366Gly
G/T 32062450 synonymous_variant p.Ala353Ala
G/A 32062565 splice_region_variant&intron_variant
T/A 32062587 intron_variant
T/A 32062612 intron_variant
G/A 32062745 synonymous_variant p.Asn296Asn
A/G 32062856 intron_variant
T/C 32063029 intron_variant
C/A 32063058 intron_variant
G/T 32063096 intron_variant
C/G 32063172 intron_variant
A/T 32063214 intron_variant
C/T 32063357 intron_variant
T/A 32063391 intron_variant
C/T 32063405 intron_variant
T/A 32063452 intron_variant
C/G 32063453 intron_variant
C/T 32063458 intron_variant
G/A,* 32063464 intron_variant
G/A 32063478 intron_variant
T/A,* 32063529 intron_variant
T/A 32063538 intron_variant
C/T,* 32063550 intron_variant
C/G 32063570 intron_variant
G/A 32063592 intron_variant
C/T 32063632 intron_variant
G/A 32063709 intron_variant
A/C 32063775 intron_variant
T/A 32063787 intron_variant
C/G 32063807 intron_variant
A/T 32063858 intron_variant
A/T 32063888 intron_variant
G/A 32063907 intron_variant
T/A 32063917 intron_variant
C/T 32063942 intron_variant
A/G 32063956 intron_variant
G/A 32063965 intron_variant
G/A 32063991 intron_variant
C/A,G 32064007 intron_variant
C/G 32064042 intron_variant
T/G 32064053 intron_variant
A/G 32064082 intron_variant
A/T 32064087 intron_variant
T/C 32064092 intron_variant
G/A 32064101 intron_variant
C/G 32064108 intron_variant
T/C 32064126 intron_variant
G/A 32064140 intron_variant
A/T 32064150 intron_variant
A/T 32064157 intron_variant
A/G 32064166 intron_variant
T/A 32064175 intron_variant
T/A 32064194 intron_variant
G/A 32064225 intron_variant
A/T 32064231 intron_variant
C/T 32064269 intron_variant
C/T 32064272 intron_variant
C/A 32064286 intron_variant
G/A 32064297 intron_variant
A/G 32064308 intron_variant
G/A 32064325 intron_variant
G/A 32064330 intron_variant
T/C 32064334 intron_variant
T/A 32064344 intron_variant
G/T,C 32064345 intron_variant
G/C 32064358 intron_variant
G/A 32064364 intron_variant
A/G 32064369 intron_variant
C/G 32064370 intron_variant
T/C 32064388 intron_variant
A/T 32064389 intron_variant
C/G 32064395 intron_variant
C/A 32064401 intron_variant
C/T 32064414 intron_variant
A/G 32064420 intron_variant
T/C 32064426 intron_variant
C/T 32064439 intron_variant
C/G,T 32064451 intron_variant
C/T 32064452 intron_variant
C/T 32064460 intron_variant
T/C 32064470 intron_variant
T/C 32064478 intron_variant
C/T 32064479 intron_variant
C/T 32064487 intron_variant
A/C,* 32064489 intron_variant
C/T 32064494 intron_variant
T/C,* 32064507 intron_variant
G/A,* 32064525 intron_variant
A/G,* 32064527 intron_variant
G/C 32064564 intron_variant
C/T 32064567 intron_variant
G/A 32064606 intron_variant
T/C 32064863 intron_variant
G/A 32064866 intron_variant
C/T 32065041 missense_variant p.Ala229Thr
T/A 32065110 stop_gained p.Lys206*
G/A 32065138 synonymous_variant p.Cys196Cys
C/T 32065182 missense_variant p.Ala182Thr
G/T 32065407 intron_variant
A/C 32065775 intron_variant
A/C 32065801 intron_variant
G/T 32065825 intron_variant
T/G 32065950 intron_variant
G/A 32065970 intron_variant
A/T 32065982 intron_variant
A/G 32066038 intron_variant
A/C 32066057 intron_variant
C/G 32066072 intron_variant
A/T 32066084 intron_variant
G/T 32066196 synonymous_variant p.Leu138Leu
T/A 32066310 intron_variant
T/A 32066315 intron_variant
C/A 32066320 intron_variant
T/A 32066328 intron_variant
A/T 32066329 intron_variant
T/A 32066363 intron_variant
C/T 32066405 intron_variant
C/G 32066455 missense_variant p.Gly93Arg
G/T 32066565 intron_variant
T/A 32066573 intron_variant
G/T 32066616 synonymous_variant p.Pro73Pro
T/C 32066681 missense_variant p.Thr52Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21333.1
MENRHHRELTFLSSGGDFLNPPFDHTTRDTDPPIKEMDFFSSSPSSPATHKTNNTNHINHVGLQDHTHPQGSPPHVSHHPVNTGLNLTCASTGLTKEENGENHEAELSSIESQLRRLQEENRKLRTVLDQITRSYTQLQAQLFITLQKQKLPQNTEANGMVSEQKNVDPAGVCRKLEVVNEASVCDEKTDGEVSVCRSNNVEVLSKTDDDEAPQFIKLNLGKQACPDAAEDVLDRSSSQSWGSSKLEEQPKTAEQVSADQIPLRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCVEDKTVLITTYEGNHNHPLPPAATAMASTTSAAAAMLLSGSTASKEALTNSAGYYSSLPYASMATLSASAPFPTITLDLTQNPNAMHLHRVPPHATTFPLPLHASGGHQLLGHPLFFSQKLPPAASPLLHARQTSSMVETVSAAIASDPNFTSALAAAISSIIGIPSNNNGTTGAIGSPQLPQSCTTFSTN*


CDS Sequence:
>Vu_21333.1
ATGGAGAACCGACACCACCGTGAATTGACCTTTTTAAGCTCCGGCGGCGACTTCCTCAATCCCCCTTTCGATCACACAACCCGCGACACCGATCCTCCCATCAAAGAAATGGACTTCTTCTCATCATCACCTTCATCTCCGGCTACTCATAAAACCAACAACACCAATCATATCAACCATGTTGGACTTCAAGATCACACTCATCCACAAGGATCACCCCCACACGTCTCTCATCACCCTGTAAACACCGGACTGAATTTAACTTGTGCAAGTACTGGACTCACAAAAGAAGAAAATGGTGAAAATCATGAAGCTGAGCTGAGTTCCATTGAAAGTCAATTGCGGAGACTACAGGAAGAGAATCGTAAGTTGAGAACTGTGCTGGACCAGATTACTAGAAGCTACACCCAACTCCAAGCTCAGTTATTCATCACTCTGCAGAAACAAAAGCTTCCTCAGAATACGGAGGCAAATGGGATGGTGTCGGAACAAAAAAATGTGGACCCAGCTGGAGTATGCAGGAAGTTAGAGGTGGTAAATGAAGCATCGGTTTGTGATGAAAAGACTGATGGTGAGGTATCGGTTTGCCGCTCAAACAACGTTGAGGTATTGTCAAAGACAGATGATGATGAGGCTCCTCAATTCATTAAACTGAACCTTGGAAAACAGGCTTGTCCCGATGCTGCAGAAGATGTTCTTGACCGGTCCTCCTCACAGAGCTGGGGCTCATCCAAGTTAGAAGAACAACCCAAAACTGCAGAACAAGTTTCTGCAGATCAGATTCCTCTCAGGAAAGCCAGGGTTTCCGTACGAGCTAGATCAGAAGCTCCACTGATCAGTGATGGTTGTCAGTGGAGGAAATATGGACAGAAAATGGCAAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGTACTATGGCTGTAGGATGCCCAGTGCGCAAACAGGTGCAGAGATGCGTAGAAGACAAGACCGTGTTGATAACAACCTACGAAGGCAATCACAATCACCCTCTGCCACCAGCTGCCACTGCCATGGCAAGTACCACATCAGCAGCCGCCGCCATGCTCTTGTCAGGTTCAACAGCCAGCAAAGAAGCACTCACAAACTCTGCGGGATATTACTCTTCGCTTCCCTACGCTTCAATGGCAACCCTATCCGCTTCAGCACCATTCCCGACCATTACTCTCGACTTGACCCAAAACCCCAACGCCATGCACCTCCACCGCGTACCACCCCATGCTACTACGTTCCCTCTCCCACTGCATGCTTCCGGTGGTCACCAACTTCTAGGCCACCCCTTGTTCTTCTCACAGAAGCTTCCACCTGCAGCATCGCCCCTACTTCATGCTCGACAAACTTCATCTATGGTCGAAACGGTTAGTGCAGCCATTGCTTCCGATCCAAACTTCACTTCAGCTTTGGCAGCAGCAATCTCCTCAATCATTGGAATACCTAGTAACAACAACGGAACTACTGGTGCCATTGGGTCACCGCAGCTTCCTCAGTCATGCACTACTTTCTCCACCAACTAG


Promoter Sequence:
>Vu_21333::LG5:32066894-32068894(-)
TTCACAAAGGAAATAAGGATAAAGATAATAAAGATTACAGGGTAAATTAATCATGCTAAGTGCAAGGTTTTACCGTTTTAATTTTGAAAAAAATTACTACATATATAATTTGTAAATTTACGAAATTATACAATACTTTGAGAACAAATATAGAAACTTTATTCGAATTTAAATTGACTTGTTACAAAAGAAAAAATATTTCCTTGTAGCAATTTTGGTATATACATATATATAATTAAATGTGTTAAAATTATTATATTTTATTAATTAAATATTAAAGTGATTTCATTAATTTAATTTATGATTAAAGCGTATATATCAGAAAATATTAATATTAAAAATTAATTAAGTAAGTAACATAAGCTATATAAAAAAAATATAATTCTCTTTTATAAACAGTAAGTTTTATTTCAAATTCTTTCTCTTTATTCTCATCAAACGAAAAAATAACAAAAAAAACATAAAATACTTTACAGTTGGAAGATCAAGTATGTTTTCACATACTCTTTTATGAAATTTTTTAGGATTATTTAATTAGTTAAAAAATATTATTGTTTATTAATCTGTTTTTGGCGCATAATTGAACACTTTTCCCTTGAGTATTTATTCCAGATACCTTAAAATATATCTTTCACTTTTCTTTTTCAAATAGGAGTGTACTACACTTTTAATATATTTTTTTGTTAAAATTTAGTTACTTTATATAAAAACAACTGTCAAAATATATTTTACACCATCGTTTATTGTTCCACTCTCTTATATTAATTTTTTTTTCATTTTCAGAAATGAAAATACGCCATATGCCCTTGTTACCATTTTTAATTTTCTATAAAAGAATCTAATAACTTCTGTGGAGAATACTTTTTTTTACCGAAAAAGTAGATTTGTTATTTGTGCATTTTTTTTTATGGAAATACGTATTACTAAAGTATTTATTTTAACAATATATTAATTTATTTAACCGAGTTGAATGTCATTTCTAACCTTTCATACATTACTAGCAACAAATTTAGTTTAAGGTTTTGTGACTTTCAAACTTACATCCTGTTAATGTTGTTTTAAGTTTATCTCAATATATTGTGTGAACCTTTTACTAGAAACCTTTATTATGCAAATGACAAATATAAAATTGTAATCGGGTAATTAAGAATAGATAAAAATAAAAGGAAAATAGAAGGTTGTCCTAAAAAAATAGGAAGGAATACAAAGGTTGGGTCTTCAATAAACCTCGATTGAGATGGATGGTTGATCCCAATGACGTCGTGGTTGCCTTCAAAGTCAGTGGGATTAGGTTTTCCAATCCTGTGGGTCCCACTCATTCCAACTACCGTCGACGATAGAAAGAGCCGTGCCGTCAACTGGGTTGACCTTATGGGACTACCCCACGTGGATCCATTCCCCCAACCCTAACCGCCGTTATTCTTAACGCCGTTCTCAAATCCCTATAAAATATCTCTTTTCTTTTCCATTTTTCATTGTCACACCCTCTACGTCTTAGCTCCCATATTTTATCACCGTTAACTTTTAACAATATTAAATATAATTTAGTTTACATATACATATATGATTATGAAGTTAATTTTTTAATTAAGGATTGAAATGGCTTGTTTTATGAGATTCAAATTGGAAGTTGACAACTGTAGAGAATGAAGTAACATGGTTGAATTCTCTTGTGTAACAGTAGTTATAAAGTTGAAAGAAGAAATAAAACATCTTTTTACTGTGGTTACTTACTAATATGAAAACCCTGGCTAATAAGTAAACCCCCTATGGTCCTACCCTAAGAGGGTTAATTATGGTGACGTCAATTGTGGCGAAAAAACGGCTGGTCCCTCGTCTGAGTTGTGAATCCCTTAGAACCTTTTTGGTAGACCTCTTGCTTACATTACAACATTACCTTTTTTCCATATTAAATTTATTGTGGGACCCCTACCTCAAGGTCCAAGGAGGGAGGGAGGGGGTGCATTGCCACATTTAATCTCATTTCCTTCGTTCATCTC


Gene Sequence:
>Vu_21333(-)
ACTGCCAACGCTAACTTTTCTTCTTTCTCTCTCTCTCTCTGCATTTCACTGATTAAACACATGGAGAACCGACACCACCGTGAATTGACCTTTTTAAGCTCCGGCGGCGACTTCCTCAATCCCCCTTTCGATCACACAACCCGCGACACCGATCCTCCCATCAAAGAAATGGACTTCTTCTCATCATCACCTTCATCTCCGGCTACTCATAAAACCAACAACACCAATCATATCAACCATGTTGGACTTCAAGATCACACTCATCCACAAGGATCACCCCCACACGTCTCTCATCACCCTGTAAACGTGAGCTTTCCCTACATGGATTTCTTCAATTCTGCATCACTGTGTGTACTTAATGCGACTCACTTTTCCATTAACTTCTTTTCATGTTTGTATATATATTCAGACCGGACTGAATTTAACTTGTGCAAGTACTGGACTCACAAAAGAAGAAAATGGTGAAAATCATGAAGCTGAGGTTTGTATGATACCCTTAGGGATGCAAACCATAAATCAAACTGTGTGATTATTTATCATGTGTTGGTTTTTGTTTTTATTTTTTTATTTTTTTGTTTGAAATAATATTTGTTTTGTTCTCAGCTGAGTTCCATTGAAAGTCAATTGCGGAGACTACAGGAAGAGAATCGTAAGTTGAGAACTGTGCTGGACCAGATTACTAGAAGCTACACCCAACTCCAAGCTCAGTTATTCATCACTCTGCAGAAACAAAAGCTTCCTCAGGTGGATTTATTATCCATAGATTTTCTGCATTTAAATTTTCTACCTTAGATTGATTCATCTTTTATCTTTCGAAACCAAGAACTAAATTGAAAATGGTATTCTCATCTTACATTAGATCACCTTTTTTACGGGTTGCCCGATGATTAAATTTTAGTTTTTTTTTTTTTTTAAAAATTTCAACCCTAACGAAATGGTTTGTTAGTTGTGTCTGTGTGCTATTTTTTTCTCTGTTCTTTAGTCAGTGAAGGAACAGGGTAGCGTGCATCACTTAAATTTGAAAAGCGTGTTATTTTCATTCACTGTCGTTTTTCAAACTCTTTCTACTCGGCGTATATAAAAATATCCATTCTTTCAAACAATTATGATATATCAGTTTAATTACTATTTGGGTTTTTCCAGACAGCTACCAGGTATTTATGATATTTAATTAAATGTTATTATTTATTTCAAATATGTTAAACATTTATCTTTTTTTCTTATTAATTAATTTATTCTAAAATACTTTATACTTTTTATATCTATTTAATTAATGGCATGAATATAACCCTTAACAAATCTCATTATTTGTTTGCCCCTGTGAGAGGACCTTCACAGTTCAGAGCTCAGACTATATATGAAATTCCCATTTCAACTAAACGACAATTAATACCAACAAGTACTTCCAGATAAAATTGACTTGACCCTCGCATATGAAGGAAAAGTCTTATCTAGCTGCAGATAACACAGCACATAATGCACTCCAGCGATAACTGAAGAAATTCACACACACACGTGGTGACACGTACTTGCACCGACAGTTAAAATCAAAAGTACTAACACATAACTGTCAAAATTCATACACACACGGATTTGTACACCAACAGTTAAAATTCATCGTGAAACAGAATACGGAGGCAAATGGGATGGTGTCGGAACAAAAAAATGTGGACCCAGCTGGAGTATGCAGGAAGTTAGAGGTGGTAAATGAAGCATCGGTTTGTGATGAAAAGACTGATGGTGAGGTATCGGTTTGCCGCTCAAACAACGTTGAGGTATTGTCAAAGACAGATGATGATGAGGCTCCTCAATTCATTAAACTGAACCTTGGAAAACAGGCTTGTCCCGATGCTGCAGAAGATGTTCTTGACCGGTCCTCCTCACAGAGCTGGGGCTCATCCAAGTTAGAAGAACAACCCAAAACTGCAGAACAAGTTTCTGCAGATCAGATTCCTCTCAGGAAAGCCAGGGTTTCCGTACGAGCTAGATCAGAAGCTCCACTGGTAATTAGTTTACCAATTTTTTTTGCCTACTTAATTTTTAGTTAGTCTTTTTAAGAATCATTATAGATTAAGGGACCATTGCACTTAGATCCCTTATGCCACTAAAACGAGGAATCTTATAAAATGAGATGCACTAAAACTAACTTAATAACACTTGTTTTTTTACTATGGAAAAATAATATGTTGACCATCAAAAGAACTACTTAATATAATAATATAACAATACACTAATATGAATAAATAATTGATAAATTAATAAAGTTGTTACATATTTATTAATTGAAACAGGGTTATCAACATATTATTGTCTTTTTTTTAATAGGAGTACAAGATAATATGTATTTTCAAATCTGGCAAATGACTCTTCAAATATATCAAGGCTTTATTCACTTGAATGGATTTTGGGGAGAGTGATTGAGGGAATTTGAAAGGATTTGAAGGTAGATTTTGTTGTTGTTTATTTGAATGAATTTGGAGGTAAATGAGAATAGATTTGGAAGTATATTTTTTTAATCTGTCACGTCAATCAAATCCTACACTGATTTTCACAAACTTTAATTCCAAATCCACTCTTACTTATCTCTCAAATCCATTCAAGTGAACAAGGCCTAAGAGCGGCGCAGATTAAGTAATTATAATTTTAATTTTTGAAAAAATATTTCAAAACTTAATGTCATGTTATATATTAATGTGTGATATCTTTATAAACTTCTTTTAATTATTTTTTGTAAAAATTTATATTATCATGTGTCAAGTCTTTGATGTAACACGTGAATACAATGTGGTAGGACAATATCACATGTCTGTGTTAATATCATATCTTATTATCTTTATTTTAATTTAGTTTTTGTATAGGTCTATTTAATTCAATTTAGTTTTAATTTGTTTTTCAAAATAAAACAATATTGTCTCTCTCCAAATTAAGACCATATTTATTATTTGTATAAATGTTATAATAATACTTTTTTTTTATAAAAAAAATGACTTTTTAACATATATTAACTCATATTTTGTTAATAATAACTTTTATCATTAAATTTTAATATAAATATTAATAATATTTATACGAATAATAAATTTGGATGAAAACCTGAAAAATTTGTTATTTGAATAAATTATACTAGTTAATTTATTCTTATAAAAAAACATGATTAATAATATATTTATTTTAAATACTTATTACTTTTTGTAAAAATATTTATACTTAATTAGTTTTGATCTTATAAAAAAAACATTGAATTAAACATATATAATAATGTGATATGTTAAAAAATATTTTTAATAAAAATATCAATAAAACATTTATATAAATAAATTTAGTGTCAATTTGAAGAGAACAATGTTGTCCAATTTAAAAAAAAAATTATATTAAATTGAATTAAAGATAGGACTAAATCAAAATTAAAATAATAACACTGAAATTGATACGTGACGTTATGATGTAACACTAACATGCCATGTGTGGTAACTAAAATTTAATAAAATAGAAAAAGAATGAGAAATTGACATGTGATATGTTATTACCGTCACTAGTGTTCTTTTATATAAAAATATTTAATTGAGTAACATTTTAAAAGATTATGATGTAATTAAAACTTTTCCATCAAGAGATTGAAGTGAGTAATTAAGCTTTATCATTAATATAATTATAAAAGGTAAATTGGTTATAAAGTAGTATGCACAACATCACAATTATTATTAGCATATATTATAAAAGTTGTATAAATTAACATCATTTATTAAGTAATGAAATTTAAAATTTCTCATTAATGATTTGAAGGCATTGAACATATTCCTCCACCTTCAAATACAAGTTAAAATAGTCAATTTTGCGTTTGTTAAGAAAGATGGTTAACTACTTTATAATTTTTTTATTTTATATAAAAAACTACATTTTCTAAATCTTTCTTAAATTAATTATACTTATTGAAGATGTTATTCATATTTCATGTAAAAGTATTTGCAACATATTCACATTAAATAAAATTGAAATTTGTTTAAATTTGACTTCACTGAATGTAGATTTATATTTGAATAGTATAGCATAATTTACTTAGTTTCACTAAACATAGAAATTAATGTTGCATTTTCAGATCAGTGATGGTTGTCAGTGGAGGAAATATGGACAGAAAATGGCAAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGTACTATGGCTGTAGGATGCCCAGTGCGCAAACAGGTAAATCATTGCATCTTCCTCAAAATTTCTTTTTTCTTAGTTTTATTGATTTTTCTCTCTTTCATATCAAGCATGTTATTCTCTACTGTTGAAAATAATTATCATATATTTATGTATTGCCCAGGTGCAGAGATGCGTAGAAGACAAGACCGTGTTGATAACAACCTACGAAGGCAATCACAATCACCCTCTGCCACCAGCTGCCACTGCCATGGCAAGTACCACATCAGCAGCCGCCGCCATGCTCTTGTCAGGTTCAACAGCCAGCAAAGAAGCACTCACAAACTCTGCGGGATATTACTCTTCGCTTCCCTACGCTTCAATGGCAACCCTATCCGCTTCAGCACCATTCCCGACCATTACTCTCGACTTGACCCAAAACCCCAACGCCATGCACCTCCACCGCGTACCACCCCATGCTACTACGTTCCCTCTCCCACTGCATGCTTCCGGTGGTCACCAACTTCTAGGCCACCCCTTGTTCTTCTCACAGAAGCTTCCACCTGCAGCATCGCCCCTACTTCATGCTCGACAAACTTCATCTATGGTCGAAACGGTTAGTGCAGCCATTGCTTCCGATCCAAACTTCACTTCAGCTTTGGCAGCAGCAATCTCCTCAATCATTGGAATACCTAGTAACAACAACGGAACTACTGGTGCCATTGGGTCACCGCAGCTTCCTCAGTCATGCACTACTTTCTCCACCAACTAGCTTCCTCGTCTCTTAGTTTTGAAAAACTATATATTTTCTTTATTTAGATGAACTTTTCTTTTAAGTATTTCTTAGAAGAAGGAAAAAAAAATTACATAAACCAAATAAATTTTCTTTGTGATTTGAATAGAGTATATGTATATACAGAAAAAAAGAGAAGATCAGCACGTGGTTGTTTTTATTTATTTTATACGAGAAAGAGTTCAACAGTCACTTCTGGTTCT