Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21075 LG5 29891385 29892654 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 29891405 synonymous_variant p.Val7Val
C/T 29891501 synonymous_variant p.Val39Val
T/C 29891518 missense_variant p.Val45Ala
C/G 29891524 missense_variant p.Ser47Cys
T/A 29891599 missense_variant p.Val72Asp
A/G 29891609 splice_region_variant&synonymous_variant p.Pro75Pro
T/C 29891613 splice_donor_variant&intron_variant
G/T 29891654 downstream_gene_variant
C/G 29891664 downstream_gene_variant
C/T 29891760 downstream_gene_variant
T/G 29891790 downstream_gene_variant
G/T 29891799 downstream_gene_variant
T/C 29891870 downstream_gene_variant
A/G 29891873 downstream_gene_variant
T/A 29891943 missense_variant p.Cys89Ser
G/A 29891972 missense_variant p.Met98Ile
C/G 29891978 missense_variant&splice_region_variant p.Phe100Leu
G/A 29891990 downstream_gene_variant
A/G 29892104 downstream_gene_variant
A/C 29892114 downstream_gene_variant
G/T 29892116 downstream_gene_variant
G/A 29892193 stop_gained p.Trp119*
G/A 29892223 synonymous_variant p.Pro129Pro
A/G 29892301 synonymous_variant p.Gln155Gln
T/C 29892375 missense_variant p.Leu180Pro
T/A 29892381 stop_gained p.Leu182*
A/G 29892382 synonymous_variant p.Leu182Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21075.1
MTAWLVVLLADRKELRKLQHEGEGFFKKLLQFAANVRVVVKVVDVASLFLLSASSSPIPRVSQATMDLPSQVVKPWFVMLNIGVDEEEVLVKMEILCDEILIKKSCFTGRSSEQERLTVEFWREADILSELHHPNVVAFYGVVQHGPGGTMATVAKYMVDGSHRHVYLDRRKRLIIAMDAAFRMEYLHSKNIVHFDLKCDNLLVNLKDPLRPIRKVGDFGLSKIKRNTLVTGVRGTHYLEWHQLLNGRSNKVSEKVDVFSFGIVLWEILINV*


CDS Sequence:
>Vu_21075.1
ATGACGGCATGGCTGGTGGTGCTACTCGCAGATCGAAAGGAACTAAGGAAGCTCCAACACGAGGGAGAAGGATTCTTCAAGAAACTACTGCAATTCGCTGCCAATGTCAGGGTCGTCGTTAAAGTCGTTGATGTTGCTTCCCTTTTCCTCCTCAGCGCATCCTCTTCCCCAATCCCTAGGGTTTCACAAGCCACCATGGATCTCCCTTCCCAAGTCGTGAAGCCATGGTTTGTGATGTTGAACATTGGAGTGGATGAAGAAGAGGTGTTGGTGAAGATGGAAATATTGTGTGATGAAATTCTAATAAAGAAGAGCTGCTTCACGGGTCGGTCATCTGAACAAGAGAGATTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTTTCCGAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGTGGTACAATGGCCACTGTGGCAAAATATATGGTGGATGGTTCTCATAGGCATGTATATCTTGATCGTCGGAAGAGGCTGATAATTGCAATGGATGCTGCTTTTAGAATGGAATATTTGCACTCGAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATACGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGAGAAATACTTTGGTTACTGGTGTGCGTGGGACACACTACCTTGAATGGCACCAGCTTCTGAATGGCCGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATTGTATTATGGGAAATTCTTATTAATGTGTAA


Promoter Sequence:
>Vu_21075::LG5:29889385-29891385(+)
TATAAGAAAAAATTCACGAATTCTTTATAGATACTATCATATTATAATGATGTATAATAAGTGAATTTTGGTTTAGATTTTTGTAAGATATATGCGCTAAATGATCATTGACACGTATTGTGATATAATTTTACGCATGTTACCTTAAAAAAACGTCTTAATCTCATTATTTTTGTCTTACAATAAATACTCAAAAATACAATGGTGATTTGAAATATTTAAAGCAGAATTAAAAAGATATATTTTACTGAAAATAGAACTACAATGCAATTTATAAAAATTTAAAAAGTGATGATTAATTTTGTAAAATAATAAAAATATATAGAAATCAAATACAAAAACTAAAACCAAATTTTCGTGTCTTTCCCTTTATCCCAGAGCCTTGAAGTAGAGACGTTGAAGAATCTTCATTAAAAAATAACTCTTCTACGTTGAATTATTTATATTTAGACAACTTATGACGAGTAAGCAATCCAGTGACAGCATCTTTACCTACTAAAGGCAGACAAAAAGAACTCGATCAGATAAATGCATTCATAACCTAATTTTTGTAAGATAAATTAAAACACATTTACCCAAAATAAGCTGTTATTATATAGAATTTTATTTTGAAAAATATTTTTTTAATAATTTTTTCTTGATAATTTTTTTTTAAAATGTAATAATTTATAATTGATCCATTTTAAATATTATTATTAATAAGATAATAATTTATTGTCAGAAAGTTATCGAAAAAATTTGTTAACATGTTTTTTTTTATTGTTTTCGGTCTCTTTGTCTCTCTCCACTCACTGTCTTAACACGAAGACCAATTGAAAAACGAAGCAAAACTATCAACTAATTTACATCAGGACAACGCTATATACAACTTTTTTATATTAAATTCATTAATACTTTATATTATTTTCGTCAGCCATGTTTTTTTTTTAATATTGCGTCATCAATCATGATAGCAAGTGTATTGCTTTTGAGGTAGACCTTCTACTGTATAACCAAACTATATTTTTAATAGCATAAATGATTTTGTGTTAATCTCTTCTAAACTATATCTTCTGTTACAGTTTCCCAACATTGGAATATGTTTGCTTCCAACTAAGTAAAATATAGACATAGGAAATACATGAAGAATAAAAACGAGAACAAAAATATTAAAATAGAAACGTGTAGATTAAACTTTCCACGCAAAATCTTAAAAGATTTACACACAACTTAATATATAATCGATTAATGTACGAGAACATTGATTATATAGGAAATATTATTGAAATTTATATAATATAATTCAACACACATATTTATTATATTTATGTTATATAATAAAAATAGATAAATTTGGATGCAGGCATCTGATGTGTTGCTGGAAATATTGAGTTTGATTAAATGCCTAAAAAGTGATGCAAGATTTATTTGGCAATCACGAACTCGAGATACTCAAACCTTCGGCTAAAAAAATGGTCACGCATGTGCAAAATTTTTCCCTAAGCAAAGTGGCAAACCATTACTTCACAAACAAAACATGCACGTTGCATAGAACAATTTAGATTTTCTTTTGCTAGATTTTTGTTACCATTTTTTTATGTCTTCACAATACATTAATTTTTATATTTTAAATAGAGGATATGGGGCCTTCTTCTTTTACCCCGTTGTTTTTTTTTTCTGCACCTCTAATTTTTTTCTTACTTCCCATTTTGCCCCTTTCATCTTCGGATCTGGTTAGAAGAATCGAATTACATAATTCGGGTAAAGGAATTGTGCACTATGATATGAAGTTCCAGATCGGAGAGTGAGAATCAGATTACCTAATCCGAAACTTATCAGATTGGACTATCTGGATATCTCCGGGGAAATGCTCACCAGATTGATAAATATGTTTAACTTTTCTCGAATCTAGAATTTATATCGGATTGTGCAGTTCGGTAACTACACCTTGGAAAATATTAACTAGATTGCAAATTCCGGTTTAAATAACTTCTAGATTAGATAATGTCCTCGGACGCAGA


Gene Sequence:
>Vu_21075(+)
ATGACGGCATGGCTGGTGGTGCTACTCGCAGATCGAAAGGAACTAAGGAAGCTCCAACACGAGGGAGAAGGATTCTTCAAGAAACTACTGCAATTCGCTGCCAATGTCAGGGTCGTCGTTAAAGTCGTTGATGTTGCTTCCCTTTTCCTCCTCAGCGCATCCTCTTCCCCAATCCCTAGGGTTTCACAAGCCACCATGGATCTCCCTTCCCAAGTCGTGAAGCCATGGTGCTGCAACCTCACCTTTTCCTTCGTGTCAGAGTCGAACGTGATCGCCAACCTTACTACACCTCTGCCATGCTGTGTTGTTAGCCCACCACCGATGTTACCACCAATCTTCCTCCTCGATTGTTTTTTAACCTTCTTCCTACTCTTTCACGTTGTGGGTACTAGATGAAAATGTGATTATTAAATGGGTTTTCTGGTTGTGGGTACCGGATGAAAATGGGGTTTGCTGTTTTTTATGTTGCTTGTGTTTGGTATGTGTGAAAGATGATTGACGATGTTGGATTGAGAATTAGGTTTGTGATGTTGAACATTGGAGTGGATGAAGAAGAGGTGTTGGTGAAGATGGAAATATTGTGTGATGAAATTCTGTGCTTGAGAGGATGAACATAATGATTGGACAAGATATAAGGTCCAATGAAGAGGCGAACGGAATGGCCTGATGAGGAAGAAGATGGAAAATGTCGGGTTAAGGCAAAGATTGAAGATGAAATGAAAAATGGAGAGGAATAAATGTTTTTATTAAAAGAATAAAGAAGAGCTGCTTCACGGGTCGGTCATCTGAACAAGAGAGATTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTTTCCGAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGTGGTACAATGGCCACTGTGGCAAAATATATGGTGGATGGTTCTCATAGGCATGTATATCTTGATCGTCGGAAGAGGCTGATAATTGCAATGGATGCTGCTTTTAGAATGGAATATTTGCACTCGAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATACGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGAGAAATACTTTGGTTACTGGTGTGCGTGGGACACACTACCTTGAATGGCACCAGCTTCTGAATGGCCGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATTGTATTATGGGAAATTCTTATTAATGTGTAA